Acipenser ruthenus (sterlet): 117423237
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Entry
117423237 CDS
T07327
Name
(RefSeq) E3 ubiquitin-protein ligase RNF135-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
117423237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117423237
Enzymes [BR:
arut01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117423237
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117423237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-C3HC4_4
zf-RING_UBOX
PRY
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
ANCHR-like_BBOX
zf-RING_5
TetR_C_13
U-box
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
117423237
NCBI-ProteinID:
XP_033894635
LinkDB
All DBs
Position
18:complement(1234906..1239800)
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AA seq
544 aa
AA seq
DB search
MASGSESRELECMICLKLFTDPTTIPCGHSYCIECIKTFRQSQINKYNKYSCPQCKDPLG
KEPELKKNTTLCALVELSKTAEPKQPPSPTASEDGTHDSQCDICNPERATATCLTSNMSY
CPKHVETHYENGHLKSHKHRNVIEAVCETGGEYQCVDCVAAHPACLYSSVQGEFDKKKET
LKRKLESVTSAIQTTEENLAKRSKEKREIEQSAARINESLSREFAELRQVLEEREKAALS
AVRSSQKAASSRVSQIIHGLSSAQDALQRKKSELELVNVKDFFEFLRTDLPESEESSLAV
DEESTALIQEEGSAVKDAIADLKEDVQSKLDNAIKAIKQTQTEEITEAHLESEAAEPEND
TAPKRSAELIQCFANLTFDPNTAHKRLALSEGNRRVTVKQNNRTDSCMQERFTISHVMAS
TGFSEGCHYWEVNTHLSKGWAIGIAYQRLGRADKLGRNALSWCVEWSRSRFSAWHDSVEV
RLPQGELSGIGVHLKCDEGKVSFYAVSVSETLLHTFDVQFSEPVFPVFWLFGLDKGSALS
FVEP
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagggagcgagagccgcgagctcgagtgtatgatctgcttgaaattatttaca
gatccgaccaccataccctgcggacacagttattgtatagagtgcatcaagacgttccgg
cagtcccaaatcaacaaatacaacaaatacagctgtccacaatgcaaggacccacttggg
aaggaacccgaactcaagaagaacactacactgtgcgccttagtcgagttatccaaaacc
gcagaaccgaagcagcctccgagtcctaccgcctccgaggatgggacccacgactcccag
tgcgacatctgcaacccagagagggctacggcgacgtgtctgaccagcaacatgtcgtat
tgccccaagcacgttgaaacgcactacgaaaatggacatttaaaaagccacaagcaccgg
aatgtcatcgaggctgtgtgcgaaacagggggtgaatatcagtgcgtggattgcgtggct
gcgcatcccgcgtgtctttacagcagtgtgcagggagagtttgacaaaaagaaagagacc
ctgaaaaggaagctggagtcggtgacatctgccatccaaacaacggaggagaacctggca
aagaggagcaaagaaaaacgcgagatcgagcaatctgctgcaaggataaacgagtcactc
agcagagagtttgcagaattaagacaggttttagaggagagagagaaggcggcgctgagt
gctgtccgtagcagtcagaaggcggcgagcagccgggtgtcacagatcattcacggtctg
agctcagcccaggacgccctgcagagaaagaagagcgagctggagctggtgaatgtgaaa
gacttctttgaatttctgaggacggatctgcccgagtctgaagagagttcccttgctgtg
gatgaagagagcacagctctgatccaggaggaggggtctgcagtgaaggatgccatcgct
gacctgaaggaggacgttcagtctaaactggacaacgccataaaggccataaagcaaaca
caaacagaagaaattacagaagctcatctagaatcggaagctgcagagcctgaaaatgat
actgccccaaaaagatcggctgaacttatccagtgttttgccaacctcacctttgaccca
aacacagcccataagcgcctagcactgtcggaaggaaaccgcagagtgacggtgaagcag
aataaccggacagattcatgcatgcaggagcgcttcacaattagccacgtcatggcttcc
acaggcttctctgagggctgccactactgggaggtgaacacccatctcagcaaaggctgg
gccatcgggatagcctaccagcggctgggacgcgcagacaaactggggaggaacgccctc
tcgtggtgcgtggagtggagcaggtcacgcttctccgcctggcacgacagtgtggaagtg
aggctccctcagggggagctctctgggataggggtgcacttgaagtgtgacgagggcaag
gtgtcgttctacgccgtgtccgtgtccgagaccctcctgcacacctttgatgtgcagttt
agcgagccggtatttccagtgttttggttgtttgggctggataagggtagtgctttgtct
tttgtggagccgtag
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