KEGG   Acipenser ruthenus (sterlet): 117423317
Entry
117423317         CDS       T07327                                 
Symbol
chad
Name
(RefSeq) chondroadherin
  KO
K06248  chondroadherin
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut04510  Focal adhesion
arut04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:arut00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    117423317 (chad)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    117423317 (chad)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:arut00535]
    117423317 (chad)
Proteoglycans [BR:arut00535]
 Extracellular matrix (ECM) proteoglycans
  Small leucine-rich proteoglycan (SLRP) family
   class IV
    117423317 (chad)
SSDB
Motif
Pfam: LRR_8 LRR_4 LRR_5 LRR_1 LRR_14 LRRNT LRR_9 LRR_EndoS LRR_LRWD1
Other DBs
NCBI-GeneID: 117423317
NCBI-ProteinID: XP_033894753
LinkDB
Position
18:12835031..12851293
AA seq 361 aa
MQRMSFLVASLLALVASVSPAPSQCPSPCHCHGDLQHVICDNVGLKKIPETSDATRLLNL
QRNQLPVIPSGAFSSSPGLISLHLQNCHIKEISGKAFKGLKKLIYLYISNNEISIIKPGA
FEDLTELTYLYLDSNRISDLPRGILAPMINLFTLQLNDNKIRELRAGSFSGAKDLRWLHI
SGNDMTSIQPSALEDVENLAILHLEQNRLSSFPSAALSKLRVLEELKLSKNPMKSIPDNA
FQSFGRYMEKLYLDSMGLERFSDGAFNGVTALKSLHLENNKLNTLPSSLSFTTIQNMTIA
NNPWMCSCPLAPLRKWMDSSRLRPEGACAAPSQYRGQQIRDSAAFNGCRQKTKRAKKGAR
F
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgcagagaatgagcttcctagttgcctctttgctagccctggtggccagcgtctctcct
gctccgagtcagtgccccagcccctgccactgccatggtgacctgcagcatgttatctgt
gataatgtggggctcaagaagatcccagaaacatccgacgccacacgcctcctcaacctg
cagaggaaccagctgcctgtgatccccagcggtgccttcagcagctcgccggggctcatc
tccctgcatctgcagaactgccacatcaaggagatctcaggcaaggccttcaaagggctc
aagaagctcatctacctctacatatccaacaacgagatcagcatcatcaagccaggagcc
ttcgaggacctgaccgagctcacctacctctacctggacagcaaccgcatcagtgacctg
ccccgcggcatcctggcccccatgatcaacctcttcaccctgcagctgaacgacaacaag
atccgcgagcttcgggccggctccttcagcggcgccaaggacctgcgctggctccacatt
agcggcaacgacatgacctccatccagccctccgccctggaggacgtggagaacctggcc
atcctgcacctggagcagaaccggctgtcttccttccccagcgccgccctgagcaagctg
cgcgtgttggaggagctcaagctgtctaagaaccccatgaagagcatccctgacaacgcc
ttccagtccttcgggagatacatggagaagctctacctggacagcatgggcctggagcgg
ttttcagacggcgcgtttaatggagtcacagccctcaagtccctgcatttggagaacaac
aagctcaacacccttcccagcagcctctccttcaccaccatccagaacatgacgatcgcc
aacaatccctggatgtgcagctgccccctcgccccactgcgcaagtggatggactctagc
cggctccgcccagagggtgcctgtgccgccccctctcagtaccgaggccagcagatcagg
gacagcgctgccttcaacggctgcagacagaagacaaagagggccaaaaaaggggcgcgc
ttttaa

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