Acipenser ruthenus (sterlet): 117423372
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Entry
117423372 CDS
T07327
Symbol
sox2
Name
(RefSeq) transcription factor Sox-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arut03000
]
117423372 (sox2)
Transcription factors [BR:
arut03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
117423372 (sox2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
117423372
NCBI-ProteinID:
XP_033894900
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Position
18:complement(24959030..24960345)
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AA seq
315 aa
AA seq
DB search
MYSMMETELKPPAPQPHSGGTGNSNSNANNQKNSPDRVKRPMNAFMVWSRGQRRKMAQEN
PKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKD
KYTLPGGLLAPGGNAMNSGVGVGAGMGAGVNQRMDSYAHMNGWANGGYGMMQEQLGYPQH
PGLNPHSAAQMQPMHRYDMSALQYNSMTNSQTYMNGSPTYSMSYSQQSTPGMTLGSMGAV
VKSESSSSPPVVTSSSHSRAPQCQPGDLRDMISMYLPGAEVPESTAQSRLHMSQHYQSAP
VPGTTINGTLPLSHM
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatggaaaccgagctcaaaccccctgcccctcagccacattctgggggt
acgggcaactctaactcgaatgcaaacaaccagaaaaacagcccggaccgagtgaagaga
cccatgaacgcgtttatggtgtggtcgagagggcaaaggagaaaaatggcgcaggagaac
ccgaaaatgcacaattcagaaatcagcaaaagactcggggccgagtggaaacttttatcc
gaatctgagaagcgaccttttatcgacgaagccaagcggctcagagctctccacatgaag
gaacacccggattacaaatacagaccgaggcggaaaaccaagaccctgatgaagaaggac
aagtacactctgccaggtggacttcttgctccgggcggcaatgcgatgaacagcggggta
ggtgtaggggctggcatgggtgccggggtcaatcaaaggatggacagttatgcacatatg
aatggctgggccaacggaggctatggtatgatgcaggagcagctgggctacccgcagcac
ccgggtttaaatcctcacagcgctgcacagatgcagccaatgcaccgctatgacatgagc
gcccttcagtacaattctatgaccaattcacagacctacatgaacgggtcccccacctac
agcatgtcgtactcccagcagagcacccctggaatgactctgggctccatgggtgcggtg
gtcaagtcagaatccagctcaagtccaccggttgtcacatcatcctctcattcgagggct
ccccagtgtcagcccggggaccttcgggacatgatcagcatgtatctgcccggagctgaa
gtaccagaatcaactgcccaaagcagacttcacatgtcacaacattaccagagcgcacct
gtacccggcacaaccattaatggcacacttcctctttcacatatgtaa
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