KEGG   Acipenser ruthenus (sterlet): 117423534
Entry
117423534         CDS       T07327                                 
Name
(RefSeq) cullin-3-like
  KO
K03869  cullin 3
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut04120  Ubiquitin mediated proteolysis
arut04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:arut00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    117423534
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    117423534
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:arut04121]
    117423534
   03400 DNA repair and recombination proteins [BR:arut03400]
    117423534
Ubiquitin system [BR:arut04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul3 complex
    Cullin
     117423534
DNA repair and recombination proteins [BR:arut03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     117423534
SSDB
Motif
Pfam: Cullin Cullin_AB Cullin_Nedd8 Stu2_CTS DUF6655
Other DBs
NCBI-GeneID: 117423534
NCBI-ProteinID: XP_033895366
LinkDB
Position
18:29839155..29856783
AA seq 767 aa
MSNLSKGGTKKDTKMRIRAFPMTMDEKYVNSIWDLLKNAIQEIQRKNNSGLSFEELYRNA
YTMVLHKHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRD
ILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRG
AIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARI
NEEIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYK
LFSRVPNGLKTMCECMSSYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFN
NDRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVETILDKAMVLFRF
MQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISN
TTMDEFRQHLQSTGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEVFRRFYLA
KHSGRQLTLQHHMGSADLNATFYGPIKKEDGSEVGVGGAQVTGCNTRKHILQVSTFQMTI
LMLFNNRDKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIENGHVFTV
NDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRVMKSRKKMQHNV
LVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA
NT seq 2304 nt   +upstreamnt  +downstreamnt
atgtcgaacctcagcaaaggcggcaccaagaaggacaccaagatgaggatacgagccttt
cctatgacgatggacgagaagtatgtgaacagcatctgggaccttctgaaaaatgccatc
caggagatccagcggaagaataatagcgggctcagctttgaggaactttacaggaatgca
tacaccatggtgttacacaaacatggagagaaactctatacaggactcagagaagtcgtc
acagaacatctaatcaacaaagtacgagaagatgtgttaaactcgttaaataataatttt
ttgcaaacattaaaccaagcttggaatgaccatcagacagctatggtgatgatcagagac
atcttgatgtacatggaccgtgtatatgtacaacagaataatgtagaaaacgtctacaat
cttgggttaatcattttcagagaccaggttgtacgttatgggtgcatcagagatcacctc
agacagacgcttttggacatgattgcaagagagaggaaaggcgaggtggtagacagggga
gcaatccgaaatgcttgccagatgttaatgattctaggccttgaagggagatcagtttat
gaagaagattttgaagctccatttttagagatgtctgcagaatttttccagatggaaagt
cagaagtttttagctgaaaacagtgcaagtgtgtacattaagaaagtagaggctagaatc
aatgaagaaattgaacgggtgatgcactgcttggacaaatccacagaagaacccattgta
aaagtagttgagagggaactcatttccaagcacatgaaaaccattgtggaaatggagaac
tctggtcttgtgcatatgctgaaaaacggaaagacagaagatttggcctgtatgtacaag
ctctttagcagagtgccaaatggcctgaagacgatgtgcgagtgcatgagttcatacctg
cgggagcaggggaaggcactggtgtctgaagaaggagaaggcaagaaccctgtagattac
attcagggtcttctggacctgaagagccggtttgatcgtttcctgcaagaatccttcaat
aatgatcggcttttcaaacagaccattgctggagactttgagtacttcctgaatctcaat
tccaggtcaccagagtatctctcgttatttattgatgataagctgaaaaaaggagtgaag
ggactcacagaacaggaggtggagacaatcctcgacaaagcaatggttttgtttaggttc
atgcaggaaaaagacgtgtttgaacggtattataaacagcacttagccagaagacttctc
accaacaaaagtgtgtctgatgattcagagaaaaacatgatctcaaaattgaagaccgag
tgcggctgtcagttcacttccaaactggaaggaatgttcagggacatgagcatctcaaat
acaacaatggatgagtttagacaacatctgcagtccacaggggtttctttaggtggagtt
gatttaacagtaagagtactaactactggttactggcccacacaatctgccacaccaaaa
tgcaacatccctccagcacccagacatgcttttgaagtatttagaaggttttacttggcc
aaacacagcggtcgacagcttacactccaacaccatatgggctctgcagatttaaacgcc
actttttatggtcctattaaaaaggaggatggttctgaagttggagtaggaggagcacaa
gtaactggctgtaataccagaaagcacatattgcaagtgtcaacgtttcagatgacaata
ttaatgctcttcaacaatagagataaatacacatttgaggaaattcaacaggagacggat
attcctgaacgagagctggttagagctcttcagtcgctggcatgtggcaagccaacacag
cgagttcttactaaagaaccaaaatctaaagaaattgagaatgggcatgtatttacagta
aatgaccagttcacttccaaattgcacagagtgaagattcaaacagttgctgccaaacaa
ggagagtcggatccagagagaaaagaaacacggcaaaaagtagatgacgacaggaaacat
gagattgaggccgccattgtacgagtcatgaaatccagaaagaagatgcagcataatgtg
cttgtagcagaggtgactcagcagctgaaggctcgtttcttaccaagtccagttgttatt
aaaaaacgaattgaaggacttattgagagagaatatttggcacgaacacctgaggatcgc
aaagtatatacttacgtagcataa

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