Acipenser ruthenus (sterlet): 117423736
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Entry
117423736 CDS
T07327
Name
(RefSeq) coatomer subunit beta'
KO
K17302
coatomer subunit beta'
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arut04131
]
117423736
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
arut04147
]
117423736
Membrane trafficking [BR:
arut04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
117423736
Exosome [BR:
arut04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
117423736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_IFT122_1st
ANAPC4_WD40
WDR90_beta-prop_4th
PEP5_VPS11_N
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_LRRK2
Beta-prop_WDR35_TULP_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
117423736
NCBI-ProteinID:
XP_033895752
LinkDB
All DBs
Position
18:30620783..30632331
Genome browser
AA seq
928 aa
AA seq
DB search
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHESQTLVKTFEVCDLPV
RASKFVARKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDD
MLIKLWDWEKKWTCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIIKLG
REEPAMSMDANGKIIWAKHSEVQQANLKAMGDTEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESSSVVKIFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWDNTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILKYLGEKVAAAQESNEGITEDGIEDAFEVQGEIQEIVKTGLWVGDCFIYTSSV
NRLNYFVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFGMADKVLPTIPKEQRTRVAHFLEKQGFKPQALAVSSDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNATMVNKLAEAAE
KDGKNNIAFMTYFLQGKLDHCLELLIRTGRLPEAAFLARTYLPSQVSRVVKLWRESLSKV
NQKAAESLADPTEYGNLFPGLKEAFVAEQFIKETSLGKLRPAAEYPLVTMNEERNVLEEA
KGYEPKGAVLSQETVPKEEMTEAAAFPEPSFVMQASAPEPNPAPTPTEPTPDKPEKTLNE
EFEEDLDNLDLEDIDTTDVNLDDDFLDD
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgagactagatattaagaggaagctcacagctcggtctgaccgagtgaagagt
gtggacctgcacccaacagagccctggatgttagccagtctttataatggcagtgtctgt
gtatggaaccatgaaagccagactctcgtgaagacgtttgaagtgtgtgatttgccagta
agagcctccaaatttgttgccagaaagaattgggtcatcactggagcggatgacatgcag
attcgagttttcaactacaacaccttggagagagttcacatgttcgaagcacactccgat
tatatccgatgcatagcggtgcatcccacacagccatacattctgaccagcagtgatgac
atgcttatcaagctttgggactgggagaaaaaatggacctgtagccaagtgtttgagggc
catacacattatgttatgcaaattgtcatcaaccccaaagacaacaaccagtttgccagt
gcctctctggacagaacaattaaggtgtggcaacttggctcatcctctccaaacttcaca
ttagagggccatgaaaagggagtgaactgcattgattattacagtggaggtgacaaacct
tacctcatttcaggagctgatgatcgattagtgaaaatttgggactaccagaacaagacc
tgtgtgcaaacgttagaaggacatgctcagaacgtatcatgtgtcagctttcatcctgag
ctccccatcatcatcaccggctcagaagacggcactgttcgtatctggcattcaagcaca
taccgcctggagagcacgctgaactatggcatggagagagtgtggtgtgtggccagccta
cggggctccaacaacgtggcactggggtacgatgaaggcagcattatcattaagcttggt
cgtgaggagcctgctatgtccatggatgctaatggaaagatcatttgggctaaacactcc
gaggtccagcaggctaatctgaaagccatgggtgatactgaaattaaggatggagagcgg
ctgcctttggctgtgaaagacatgggaagctgcgagatctacccacagacgatccagcac
aaccccaatggcagatttgttgtggtatgtggagatggggaatacatcatctatactgcc
atggcattgagaaacaagagcttcgggtctgcacaggagtttgtctgggcacatgattcc
tctgagtatgcaattagggaaagcagcagcgttgtgaagatctttaaaaacttcaaagaa
aagaagtctttcaaaccagattttggtgcagaaggtatctatggcgggttcttgttggga
gtcagatctgttaatggtttggcattttatgattgggataacacagaactgatccgccga
attgaaatccagcctaaacatattttctggtccgactctggggagctggtctgcattgct
actgaggagtcatttttcattctgaaatacctgggagagaaggtggcagcagcgcaggaa
tcaaatgagggcataactgaagacggcattgaggatgcctttgaggttcagggagaaatc
caggaaatagtcaagacagggttgtgggtcggagattgcttcatctacaccagctctgta
aacaggctgaattactttgttggcggagaaattgttaccattgctcacttggacagaact
atgtatcttttgggttatatccccaaagataaccggctgtacctgggtgataaagagttg
aacattgtcagttattccctgctggtctctgtgctggaataccagactgcagtgatgagg
agagactttggtatggcagataaggttcttcctacaattccgaaagaacagaggaccaga
gtggcacactttctagaaaaacagggtttcaaaccgcaagcccttgcagtatcttcagat
ccagagcatcgctttgaactggctctgcagcttggggagctgaagatcgcatatcagctg
gcagtcgaagcagagtcggagcagaagtggaagcagctagctgagcttgccatcagtaag
tgtcagtttggccttgcccaggaatgccttcaccacgcacaggactacggtggacttctg
ttgctggccactgcctctggtaatgccaccatggtcaacaaacttgctgaggcggctgaa
aaggacggcaagaataacattgcttttatgacctacttcttgcagggaaaactcgaccac
tgtctggaactgttgattcggacaggacgtcttcctgaagctgcctttctcgctcgtacc
taccttccaagtcaggtgtcaagggttgtaaaactgtggcgagagagtctttccaaagtg
aaccagaaagctgcagagtctttagctgatcccaccgaatatggaaacctgtttccaggg
ttgaaagaagcatttgtggcggaacaattcattaaggaaactagtcttggaaagttgaga
ccagctgcggagtacccactagtcactatgaacgaagagagaaatgtattggaagaagct
aaaggttatgagccaaaaggagcagttctgtcacaggagactgttccgaaagaagaaatg
actgaagcagcagcgttcccagaaccgtcgttcgtgatgcaagcctctgcacccgaaccc
aaccccgcaccaactcccacagaacccactccagacaaacctgaaaagactttgaatgaa
gaatttgaagaagatttggataacttggatctggaagacattgacacaacagacgtaaac
ctggatgatgatttcttagatgactaa
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