Acipenser ruthenus (sterlet): 117424145
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Entry
117424145 CDS
T07327
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3-like
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117424145
Enzymes [BR:
arut01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117424145
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117424145
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
Beta-prop_WDR5
Beta-prop_THOC3
EIF3I
WDR55
zf-rbx1
zf-RING_5
WD40_CDC20-Fz
zf-C3HC4_3
Beta-prop_EML_2
Beta-prop_WDR3_1st
zf-RING_Vps41
zf-RING_11
WD40_2
CFAP43_N
zf-C3HC4_4
CALCOCO1
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
zf-ANAPC11
Beta-prop_WDR36-Utp21_1st
WD40_Prp19
Myo5a
Beta-prop_WDR36-Utp21_2nd
Motif
Other DBs
NCBI-GeneID:
117424145
NCBI-ProteinID:
XP_033896147
LinkDB
All DBs
Position
17:12099644..12112246
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AA seq
729 aa
AA seq
DB search
MEEMEIDLQLGGTETVSHQVEQGGWNNVFPIIIPESESDIEEEERPRSPPLLNPQPVPIL
RGLLQGVTSSVVEPARQGTVTRRRRATRAQSQATRTSARSRWPLTAGSARQASAMESFFQ
PSRSQTVQLPYTGSLVHIVGDSATVSVTDPGSGNTTEQSDSEESLTDLEEAAAPTAPIVP
AASLTTGLAEGSAETVGSVQRDVDGPPQDSESSSPVKICGPKEMPSAPTAPLNGPGEEEG
DTCSICFEPWTNAGEHRLSTLRCGHLFGFTCIDRWLRGQGGKCPQCNKKAKRTDIVVLYA
RTLKALDTSEQERMKSLLEREQALRRKSELESAQCRLQLQVLTDECGRLRKQLQELKVLM
SQQGCSSSQSSSSRTALSQGSSQARGGRYTFNKAVMVSQTGNCRVLSYCEPLSCLLASQP
SPQATLVPGCGVKKISAVSMKACQYVPIHAKQIRGLAFSNQADSLMLSAALDSTIKLTSL
LTNTVVQTYNTGRPVWSCCWCLDDPNYIYAGLNNGSILVYDTRDTSTYVQELAPLGSRCP
VASLSYLPRAASAAFPCGGLIAGTLEGGSFWERKDGTTYGAHLLPLETGGCTDIQVEPAS
RHCLVTYRPGKSNPSLRCVLMELSRGRQINSSEDPPCTCHPVQSFNAGSSCKLLTKNAVF
ESPARDGAMLVCAGDEASNSAMLWDAGRGSLLQKLQADQPVLDISPFEVNQSSYLALLTE
KMVKIYKWD
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggaagagatggagatagacctgcagctggggggaacagagacagtgtcgcaccaagtg
gagcagggtggctggaacaatgtgttcccgataatcattcctgaatcagaaagcgacata
gaggaagaggagcggccccgtagcccccctcttctgaatccccagcccgtacccattctg
agggggctgctgcagggggtcaccagctctgtggtcgagccagcacgacaggggactgta
acgaggaggagacgggcaacacgggcgcaaagccaggccactcgcacctccgcaaggtcc
agatggcccctcacagcaggaagtgccaggcaggcctccgcgatggagagcttcttccag
ccgagccgcagccagactgtgcagctgccttacaccggctcgctggtgcacattgtgggg
gactcggccacagtgagcgtcactgacccgggttcagggaacaccacggagcagagtgac
tctgaggagagcctgactgacctggaggaggctgcagcacccacggcccccatcgtgccc
gctgcctctctcacgacaggtcttgcagaaggcagtgctgagacggtagggtctgtgcag
agggatgtagatggtcctccccaagactctgagtcaagctctcctgttaaaatttgtggg
ccaaaagagatgcccagtgcccccactgcacccctcaatggtcctggggaggaagagggc
gatacctgttcaatctgtttcgaaccctggaccaatgcaggggagcaccgcctctcgacc
ctgcgctgtggtcacctcttcgggttcacctgcatcgaccgctggcttcgggggcagggg
ggcaagtgtccgcagtgcaataagaaggcaaagcgcacggatattgtggtgctgtacgct
cgcacgttaaaggcccttgataccagtgagcaggagaggatgaaaagccttctggagcgc
gagcaagccttgcggaggaagtctgagctggagtcggcgcagtgcaggctgcagctccag
gtgttgacagatgagtgcgggcgactgcgcaagcaacttcaggagttgaaggtgttgatg
tcccagcagggctgtagctcctctcaatcgagtagctcccgcaccgccctctcgcagggc
tccagccaggcccggggggggcgctacactttcaacaaggctgtgatggtgtcccagaca
gggaactgccgcgtactgtcctactgcgagcctctcagctgcctactggcctcccagccc
tccccacaagcaacactggtaccaggctgcggcgttaagaagatcagtgcagtcagcatg
aaggcgtgtcagtacgtacccatccacgccaagcagatccgtggcctggccttcagcaac
caggcagacagtctaatgctctctgcagcgctggacagcaccatcaaactgaccagcctc
ctgacaaacacggtagtgcagacctacaacacaggccgccccgtgtggagctgctgctgg
tgcctggatgatcccaattatatctacgctgggttgaacaacggctctatcctggtgtac
gacacacgggacaccagcacatatgtgcaagagctcgcgccccttgggtccaggtgccct
gtggcctccctgtcctatctcccacgtgccgcctcggctgctttcccctgtggggggctg
atcgctgggaccctggaggggggcagcttctgggagcggaaggacgggacgacctacgga
gcccacctcctcccgctggagacaggcggctgcacagacatccaggtggaaccagccagc
cggcactgtctcgtcacctacaggccaggcaagtcaaacccctccctgcgatgtgtgctg
atggagctcagcagggggcgccagataaactcgtctgaggaccctccatgtacctgccac
cccgtccagtccttcaatgccggctcctcctgcaagttgctcaccaagaacgctgtgttt
gagagcccggcacgcgacggggccatgctggtgtgtgcaggagacgaggcttccaactct
gctatgctgtgggatgccggccgtggttctctgcttcagaaactgcaggctgaccagcca
gtgctggacattagccccttcgaggtgaaccagagcagctacctggccttgctcacggag
aagatggtgaagatctacaagtgggattga
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