Acipenser ruthenus (sterlet): 117424286
Help
Entry
117424286 CDS
T07327
Name
(RefSeq) LOW QUALITY PROTEIN: tripartite motif-containing protein 16-like protein
KO
K12006
tripartite motif-containing protein 16 [EC:
2.3.2.27
]
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117424286
Enzymes [BR:
arut01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117424286
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117424286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-B_box
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
ANCHR-like_BBOX
zf-C3HC4_3
zf-RING_2
zf-C3HC4_2
pRN1_helical
Motif
Other DBs
NCBI-GeneID:
117424286
NCBI-ProteinID:
XP_033896388
LinkDB
All DBs
Position
17:30566939..30574637
Genome browser
AA seq
635 aa
AA seq
DB search
MADPKPEGTNEQLKCPLCSNTFTCPVALPCRHKFCKACLEDRWDKVENETSYNCPECQHT
FETKPQIQKDPLLNGTVVELSNKEADEIKTPPSEEEDKVLEQNEKIIEKKEEGIENDEVI
EKKDEVIEKKNEDEDVVCDSCIETQSRAVKSCLTCLVSYCEAHLRPHLEKNKFQNHKLVE
PLRDIERRTCEVHNMPLDLFCQEDWTCICQECVIEEHSGHKTAPSGEARKEVENELKQTQ
IELDRKVKAAETAISKLQINATSIEVSVQEVKVSIDQQFSELLEAVEKAKKEAMEALDSE
ECSAVKQAEGIRAHLEQKCTELKKTHTQIEKMTKNKNDVPFLQEYIEWKKGASDDTLPSI
YXGLKDRLTSFSRVVSEASQAIRDELLSTFKNQLKELCKDDKCGIKTTVALICSPKHHIS
APEPKTRSDFLQYTSPVSFDPDTTHRYLRLTEDNHKVTNTAPWQHQYPDVPERFEHWRQV
LCAESFYLGRHYFEVDISGEGTHVGLTYKSIDRKGKESNGCITGNDFSWCLHWSSRDFSA
WHGDLETPVKATGKFTRIGIYVDYARGSLAFYGVADSMTLIHKYQAEFTEPLYPACWLSK
KENVVLLVSPGEALPQKSPSPPPTLPSTAGVQIAQ
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccccaaacctgaaggaaccaacgagcagctgaaatgccctctctgctcaaac
acattcacatgccctgtggccctaccctgcaggcacaaattctgcaaggcctgcctggaa
gatcggtgggacaaagtggagaacgagactagctacaactgcccggagtgccagcatacc
tttgaaaccaaaccccaaattcaaaaggatccactccttaacggaacagtggtggagctg
tcgaacaaagaggcagacgaaatcaagacacccccctctgaagaggaggacaaggtccta
gaacagaatgaaaagatcatagaaaagaaagaagagggcattgaaaacgacgaggtcata
gagaagaaggacgaagtcatagagaaaaagaacgaggatgaggatgtggtctgcgactcc
tgcatcgagactcagtccagggctgtgaaatcctgcctcacctgtctggtctcttactgc
gaagcccatctgagacctcacctggagaagaacaagttccagaaccataagctggtggag
ccactacgggacatcgagcggcggacctgcgaggtccacaacatgcccctggatctcttc
tgccaggaggactggacctgcatatgtcaggagtgtgtaatcgaggagcacagtgggcac
aaaactgctccctctggggaagccaggaaggaggtggagaatgaactaaagcagacacag
attgagctggacaggaaagtgaaggcagcagagaccgctatcagcaaactgcagatcaac
gccacctccattgaggtctcagtgcaggaagtgaaggtcagcattgaccagcagttctca
gagctgctggaggctgttgagaaggccaagaaggaggcgatggaggccctagacagtgag
gagtgctcagcagtgaagcaggcggagggcatcagggcacacctcgagcagaagtgcaca
gagctcaagaaaacccacacccagattgagaagatgaccaagaacaagaatgatgttccc
ttcctccaggagtacatcgagtggaagaaaggggcctccgatgacaccctacccagcatc
tacnatgggctgaaggacagactcacctccttcagcagagtggtgtccgaggcctcgcag
gccatccgggatgagctgctctccaccttcaagaaccagctcaaagagctctgtaaagac
gataaatgtggaattaaaaccacagtggctctaatctgctcccctaagcaccacatatca
gcccctgaaccgaagaccaggagcgatttcctgcaatatacctccccggtgagctttgac
cctgacacgacgcaccggtacctgcggctgacagaggacaaccacaaggtgaccaacact
gccccctggcagcaccagtacccggatgtgccggagcgtttcgagcactggcggcaggtg
ctgtgcgcggagagcttctacctgggccgccactacttcgaggtggacatcagcggggag
gggacccatgtgggtctcacctacaagagcatcgaccgcaaggggaaggagagcaatggc
tgcatcaccggcaacgacttctcctggtgcctgcactggagcagcagggacttctcagcc
tggcacggcgacttggagactcccgtcaaggccaccggcaagttcaccaggatcggcatc
tacgtggactacgctagggggagcctggctttctacggcgtcgctgactccatgactctc
atccacaagtaccaggcagagtttactgagccgctctatcctgcctgctggctctccaag
aaagagaacgtggtgctgctggtgagccccggcgaggcgcttcctcagaagagcccgtca
cctcctccaacactgccaagcacggccggggtgcaaattgcacagtag
DBGET
integrated database retrieval system
