Acipenser ruthenus (sterlet): 117424319
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Entry
117424319 CDS
T07327
Name
(RefSeq) LOW QUALITY PROTEIN: protein NLRC5-like
KO
K22615
NLR family CARD domain containing 5
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
arut04054
]
117424319
Pattern recognition receptors [BR:
arut04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
117424319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
NACHT
LRR_4
NLRC4_HD2
LRR_8
Atypical_Card
LRR_9
LRR_At5g56370
NOD2_WH
NPHP3_N
CARD
AAA_16
AAA_30
LRR_NXF1-5
nSTAND3
AAA
NB-ARC
AAA_7
ABC_tran
DnaB_C
AAA_19
AAA_22
AAA_25
TsaE
Motif
Other DBs
NCBI-GeneID:
117424319
NCBI-ProteinID:
XP_034784372
LinkDB
All DBs
Position
17:complement(2575914..2612891)
Genome browser
AA seq
1992 aa
AA seq
DB search
MQAPLCCRMDEVDLYSELSAVRSQLVDVLGLEAAGVLQQLCSLLNAEEQEEVNRTADRKG
RVSLIVDLFRDKDPGTCRQFIQTLCMICNELPMQLETRLMSAAGDGNPSEISPTEYPSCA
PDDPSHSFQENPRRRHATKSVQATETKYPRIDFAERYKSLMMKMLLLRYEKIPEDLLKRV
TLDKTFISVVKKNATKLRERIDRTRDEPCVSQDSEDGTDTMVKISDLLEPSTTSDSRVIV
LLGKAGTGKTMLMHNICHQWAKGTFAQFQFTFLFEFRQLNLVKRTLTLRQLLFNFFLLPE
EEQDAVFEFISANPRGVCLIFDGYDEFLGKFSPARPDISRDPLKPLSVAELFSGLYTGSI
LNGCTLLVTCRPKDVLDLPLSAVDRVGEVLGFDHRRVEEYALHFFRDSLYKEQAVAHLME
NRNILNMCYVPALCFISCVCLDDLLSTGSSRPLLPSTMTQFYINMLTAFLRKKDAVSSSV
ATEPLLLQKYQQEINGLCQLAMKGLEKSNIVFYTRDVPESVMRFASDNGFLTAFEVKKED
GTKDLGCAFAHLTMQEFFAALHLITSDSVTEAQLKKKFNLKSKWISRNDPKSVFTDTFHI
FVSGLSSRECTQFLSRLARRHLPWVEKRQKVILEILKKLAASNLTGPKIIELCHCTYETQ
DLELAKLIGASLTYELRNFRLTPVDMTALVFVMNTGGVSVCLDLAGCSMERDCLEVLPSC
KTIHTLIFRSRKYDDRFAEALSAVLPKIGSLKKFEFVGGHITKLGATKLASAIQHCHHLE
EINFNDNFLTDEGISEIANSFPKMKTLCKMTLGNNAATVDGILSLVKTMSTCSSIEKIHV
VGTKTAEVIFSRGSGNLPDSSAGEATRCSLNRKLSLVMCSITSQHVGQLCEILQRCPGLS
EVDLSGNYLQDEGCKALIDCLPRLNISKQIILSNNHFSEEGLCSLSHSLNVCPNVVEVEG
RHKSPETAVIRFAGSSTGGASDSEAKGGDSGGNTLKQNLKVSKKLRLTSCNIQPRHLEKL
FQTVKLCSDLEELDLSDNALGDRGLARLIKHLPGLQGVRVINVSNNLVTMDSIVCLAGSL
CTCKNICEVDMSSGGGKNLFIKFHRSPVSEAPGTCSEEHENGQRFSKRFSLRESDIDARN
MDRLCRRLTQCEGLAELDFSDSVLDDKSIEKLLSHLPQLQPLKLLNISNSRISTDGALLL
VQSLLHCERVRAVELRPKGEAFIKFVKMKADQATCKLNEYNLDKKNVEKLSGILEQCSHL
SEVDLSSNLLKDEGVKCFLDFLPRLQISNAVNLNNNKLSQVGVLYLVDSMSICNRVVEVE
VCLGTEEKSLIRFMQGEERSGAVRSILQGDCASVSERVKAGPCSAVPRHISLKECSFGLE
HLVKLAAILERSPNLVTLDLSYNTLQKEGFPALQNALANLKSLRSLQIRNNGMTFEAVVN
LVRELKGCPDVLTVRIEEPWIQSEGAVCLVFACIQLNSNILEIRVHKNTGPHHNGKPKSA
HNRKYGLCSQQVQPDSPTVFRASRVALDLGSRASVFAGCHVRSISLIHCGLQDHNLPLLT
SLGEHCLQLQELDLSHSSIGSMGAVTLSQILPSLGRLKKLSLESTQATAHEMVQLAAGLS
RCLSLESLNLSHNKIGDAGATAVADILPGMSRLRQINISCCSAVSSTGGLVLVQALCKCT
SLEEINLDALPLDPQGITCLAEALSSMTSAKKLILSDVNTSVEGGVYLVDSLKWCTRIEE
IDLGNNRIGDKGALKLVQHISGWKNLRKISLSQNSIGDAGGKKLADALSNCRLIEEICLA
NNSIGDEAAVKLADVLPIMTHLKVLSLQANRITPHGGSKLAQMLPTCKQLEEISLSENTI
GREGAFHLADALPRMKSLKKLDLKLINISDSDSIHLAVSLGHCPTIEEVNLSWNYIGDDA
ALKIAEILPRMKRLKELDLECNKITELGAKKLAERLRNCPAVKVLRLWKNQIPKEVAQAL
QDKDSRLNFSSV
NT seq
5979 nt
NT seq
+upstream
nt +downstream
nt
atgcaagctccgctatgttgcagaatggatgaggtagacctgtactcggagctgagcgct
gtgaggtctcagctggtggatgtgctcggtctggaggctgctggggttctgcagcagctc
tgtagcttgctgaatgcagaggagcaggaggaggtgaacaggactgcagacaggaagggg
agagtctcactcatagtggacctgttcagggacaaagaccccgggacatgtcgccagttc
attcaaaccctctgcatgatatgcaatgagttgcccatgcaactggaaacaaggctaatg
tctgcagccggagatggcaatcctagtgaaatatcccctacagagtacccaagctgtgct
ccagatgatccatctcactcattccaagaaaaccccagacgccgccatgcgactaaatct
gtgcaagctactgaaacgaagtaccctcggattgattttgctgaaagatacaagtccttg
atgatgaagatgctgttgctcaggtatgaaaaaatccccgaagacctactgaagcgggtc
acactggacaagacgtttataagcgtagtgaagaagaacgcgacgaagctcagggagcgg
atcgacaggactcgagacgagccgtgtgtctctcaggactctgaggacggcacagacact
atggtaaagatctcggacttacttgaaccgagcactacctccgattccagagtgatcgtc
ctgctggggaaagccggcactgggaagacaatgctcatgcacaacatctgtcaccagtgg
gccaaggggaccttcgctcagttccagtttacctttctctttgagttcaggcagctgaac
ctcgtaaaaaggacgctaacattgaggcagctcctttttaacttcttcctactgccggag
gaggagcaggacgcagtgttcgagttcatctccgcaaacccacggggggtctgcttgata
ttcgacgggtacgacgagttcctcgggaagttcagtccggcgagacctgatatctcccgg
gaccccctgaaacccctctctgtggccgagctcttctcaggtctgtacactggaagcatc
ctgaacgggtgcacgctgctcgtcacctgcagacccaaggacgttctggacctgcccctg
agtgccgtggatcgtgtgggagaagtcttagggtttgaccacagaagagtcgaggagtac
gcactgcacttcttcagggacagcctctacaaggagcaagccgtggcccacctcatggaa
aacaggaacattttgaacatgtgctacgtgccagcgttgtgcttcatcagttgcgtttgc
ctggatgacttgctttccacaggatccagccggcctctgcttcccagcacaatgactcag
ttttatatcaacatgctgacagctttcctcaggaagaaggacgctgtctccagctctgtg
gccacagagccgctgctgctgcagaagtaccaacaggagatcaacggattgtgccagctc
gccatgaaaggactggagaaaagtaacattgtgttttacactcgggacgtgccggagtcg
gtcatgaggttcgcttccgacaatggatttctcacggcgttcgaggtcaagaaggaggat
gggaccaaagacctcggctgcgcctttgctcacctgaccatgcaggagttcttcgctgcc
ttgcacttgatcactagcgacagcgtcaccgaggcccagctcaagaaaaagttcaacctg
aaatcaaagtggatttccaggaacgaccccaagtctgtgttcacggacaccttccacatc
ttcgtgtcagggctgtcgtctcgagaatgcactcagtttctcagcaggctggccagacgc
cacttaccctgggtagaaaagcgtcagaaggttattttagagattttgaagaaactggca
gcttccaaccttaccggtccgaaaatcattgaactgtgccattgtacatatgaaacccag
gacctggagttagcgaagctcatcggggcgtccttgacgtacgaactaagaaacttcagg
cttacaccggtggacatgacagctttagtgttcgtgatgaataccgggggggtgagcgtc
tgcttggatctcgcaggctgctccatggaacgggactgcctggaggtcctgcccagctgc
aagaccatccacacactcatcttccggagcaggaaatacgacgacagattcgcagaagcc
ttgtctgctgtgctacctaagattggatctctaaagaagtttgagtttgtcgggggacat
attaccaaactgggagccactaaactggccagtgcaattcagcactgtcatcatcttgaa
gagataaattttaatgacaatttccttactgatgagggaatatcagaaattgcaaactct
tttccaaaaatgaagaccctctgtaaaatgactttgggtaacaatgctgctacagtggac
ggcatcctctccctggtcaaaacaatgagcacttgctccagcattgagaaaatccatgtt
gttgggaccaaaacagctgaagtgatttttagcaggggctcaggaaaccttccagacagc
tctgcaggagaagccactcgatgcagcttgaacaggaagctcagtcttgtgatgtgcagc
ataacctcacagcacgtggggcagctgtgtgagattttgcaaagatgcccggggctctct
gaagttgatttatcaggaaattatctgcaagatgaaggatgcaaagctctgattgactgt
cttccaagacttaatatttcaaagcagatcattctgagtaacaaccacttctcggaagag
ggattgtgctcgctgtcacactccctcaatgtgtgtcccaacgtggttgaagtggagggc
agacataaatctccagaaacagcagttataaggtttgcaggatcatcaacaggaggcgca
tctgacagtgaagcaaagggaggtgactcaggagggaatacattgaaacagaacttaaag
gtttcgaaaaaactcaggctgacaagctgtaatattcaaccaaggcatcttgagaagctg
tttcagacagtgaagctctgcagtgatctggaggagcttgacttgtcagacaacgcgctg
ggagaccgaggactcgccaggctcatcaaacaccttccgggactgcaaggagtccgagtc
atcaatgtcagtaataacctggtcaccatggatagcattgtctgcctggcgggctccttg
tgcacgtgcaaaaacatctgtgaagttgacatgagttctggaggtggtaaaaatctgttc
ataaaatttcacagaagtcctgtaagtgaagctccggggacctgttctgaagagcatgaa
aacggtcagcgcttttcaaagagattcagtcttagggagagtgacattgatgcaaggaac
atggacagactgtgcaggagactgacgcagtgtgaaggactggcagaactcgatttttct
gacagtgtgctggatgataaatccatagagaaactcctgagccatctaccgcagctgcag
ccgttaaaactgctgaacattagcaactccagaatctcaacagacggagcgttactgctg
gtgcagtctctgctgcactgtgagcgtgtcagagccgtggaactgaggcccaaaggtgaa
gccttcataaagtttgtgaaaatgaaagcagaccaagcaacttgcaagttaaatgaatat
aatcttgacaagaagaacgtagaaaaactttctgggatactggaacagtgttctcatctc
tctgaagtggatttgtccagcaatttactaaaggatgaaggagtgaagtgttttttggat
ttcttacctagactgcagatttcaaacgctgtcaatctcaacaataataagctctcccaa
gtcggagttctgtacttggtggattccatgagcatctgcaaccgtgttgtggaagttgaa
gtttgcttggggacagaagagaaatccctcataaggtttatgcaaggagaggaaaggagt
ggggctgtcaggagtattttgcaaggcgactgtgcttctgtgtcggagagggtcaaggca
ggaccttgttctgcagttcccagacacatcagtctcaaggaatgtagctttgggctggaa
cacttagtgaagctggctgccattctggagaggagccccaacttagtgacgctggacctg
tcctataacacactacagaaggaggggtttccagctctccagaatgcgttggctaatctg
aaatctctgaggagcctgcaaataaggaacaatggcatgactttcgaggctgttgtaaat
cttgtccgagagttaaaaggctgccctgatgtgctaacagtaagaattgaagagccatgg
attcaatctgaaggggctgtttgtctcgtgttcgcatgcattcagctcaactcaaacata
ctagagatcagggttcataaaaacactggtccacatcacaatggaaaacccaaatctgcc
cacaacaggaagtatggactctgcagccaacaggtacagcctgacagtccgacagtcttc
cgcgcttcgcgtgttgctttagatcttggctccagagctagtgtatttgcagggtgtcat
gtgagatcaattagcttgattcattgtgggttgcaagaccacaatcttcctcttcttaca
tcccttggcgaacactgtttgcagctacaggaactggatttgtctcacagcagcattgga
agcatgggagcagtcaccttgtcacagattctcccttctctagggagactgaagaaactc
agccttgagtccacacaagccacagcacatgaaatggtgcagttggctgcaggtctgtcc
aggtgcctcagtttagaaagcctgaatttgtcacacaataagattggggatgcaggagcg
actgcagtggctgatatccttccaggaatgtctcgactcagacagataaacatttcctgt
tgcagtgctgtttcctccacgggggggttggtgcttgttcaagcgctttgcaaatgcacc
tccttagaagagatcaacttggacgcactgccgcttgatccccaggggattacctgcctt
gccgaagcgctctcaagtatgacatcagcgaagaagttaattttgagtgacgtcaacaca
agcgtggagggcggcgtttacctggtggactccctgaagtggtgcacccgaattgaagaa
atagatctgggaaacaatcggattggggacaagggagctcttaaactggtccagcacatt
tctggctggaagaatcttcgaaaaatcagcctgtctcagaacagcattggtgacgcaggt
ggaaagaaacttgcagacgctctttcaaactgcagacttattgaagagatctgtttggca
aataacagcattggtgatgaagctgcagttaagctggctgacgttttgcccatcatgaca
cacctaaaggttttaagtcttcaggctaatagaatcactccacatggtggctcgaaactg
gcccaaatgcttcccacttgtaaacagctggaggaaatcagtttgtcagaaaacacgatc
ggaagagaaggagcgtttcatcttgcagacgcgttgccccgtatgaagtctttaaagaaa
ctggatctgaagctgataaacatcagtgacagtgattctatccaccttgctgtcagcctt
ggccactgccctaccattgaagaagtcaatctgtcctggaactacattggggatgacgct
gctctgaagatagcggagattctgcccagaatgaagagattgaaagaactggatttggag
tgcaataaaattacagagttgggggcgaagaaactagcggagagacttcggaattgccct
gctgtgaaagtactgagactgtggaaaaaccagattccaaaggaagtcgctcaggctctc
caggataaagattcaagactgaatttctcttcagtgtga
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integrated database retrieval system
