Acipenser ruthenus (sterlet): 117424485
Help
Entry
117424485 CDS
T07327
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-3-like
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
117424485
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
arut04040
]
117424485
Ion channels [BR:
arut04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
117424485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
117424485
NCBI-ProteinID:
XP_034784376
LinkDB
All DBs
Position
17:complement(3701749..3732014)
Genome browser
AA seq
1410 aa
AA seq
DB search
MFSWVVKVVPQPPEPPRPLGEDVKPEPEPTPPPPAPVKKPVEVKEKVSQPQNVAAKPAKK
PPEPAESSSAASAEEKSASGGVLSWFSQGLDSVLPKPVDSLRLPRANAETEQHTKQEEQK
KVPQVKENAAATTSEPEEEQGGVFSWIVQGLAKVVPQPEDKYKDSEVEENPTEVETVKEE
EKPPPPVEEPAIKIIEVVSVSEDSKDALSEIDNAAQTIPSFTASTASVFSWLKQGLEKVV
PQPAELHAPLNTETAQKQKLAEKKEEAPAAKPEAPAKKEEVKEPPPPVKEAAPLAEPAKV
SEEAPKPTSTVSWFVQGLEKVVPQPVTRSKQDRTEEKDDGTSSQVQEISILPETVEDIVV
EEVDSDWENEKQEEPEGQLTQPEPEKEETPAMTVQELEPDQEQQGQQEETQGEDTQTLAA
QHQQPQKPLIQTRIVELEDAETQTERWTPLLQQQQAEAAEEKSQEEKAETEHSEEEDLPY
IPEEDEEDPELQVTYEQSEDEEEILECLVDVCPARGFPSPVREKPGQEVKVVQEVEPVRL
PEPIQEVEPKQEVETLQEPEPVQEVEPEPEPELEPEKEVGPDLELDHLVRESPQLPRSPS
PSSPSSALELPNVPSYRTRSPRLPPLGVQSQVSGVVNPGFSKEERPTGRLREGSKVSLHP
AVNVEDVDSAGDSSSAPGSLSLPSIVHPSSAHASTTLTVPGVPATARRKKLYSQGDSVEE
TETTIKAWPSQCSLQPDEEEDRAPSVTSQTSAIVNERLQELVKLFKGRTEKVKEKLIDPD
SSSDEESPSASPAKKAPPPPPDVKKEEKKEEEEEEHYCEMLCCKFKTMPWMMRLKEYRFP
ASIDPYTNLMYVLWLFFVTLAWNWNLWLIPVRWAFPYQTPDNLYLWLLMDYLCDLIYILD
IFIFQARLQFVRGGDIITDKKDMRENYMKSQRFKMDVISLFPLDLLYLKLGVVSVLRFPR
LLKYSAFYEFNDRLEAILSKAYIYRVIITTGYLLYCLHCNACLFYWASDYEGLGSTKWVY
DGVGNSYIRCYYFAVKTLITIGGLPDPKTLFEIIFQLLNYFIGVFAFSVMIGQMRDVVGA
ATAGQTYYRACMDSTINYMNLYKIPRSVQNRVKTWYDYTWQSQGMLDEQELLVQLPDKMR
LDIAVDVNYQIVAKVALFEGCDRQMIYDMLKRLKSVVYLPGDFVCKKGEIGREMYIIKAG
EVQVVGGPDGKTVFVTLRGGSVFGEISLLSVGGGNRRTANVMAHGFANLFILDKKDLNEI
LIHYPESQKVLRRKAKKMLTKDTKKAEGVEPKGVQHVIPPRPETPKLLRAALALTLKTRK
SGSFSKLKMKKSSSVEPQPSSSMPVPPASPMHRRSPVPQTKLAEDDDDTEDMVSESADGS
MLFRMSPSHTGEDQVLTVEGVPKEKEDPKE
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atgtttagctgggtggtgaaagttgttccccagcctcccgaaccaccccgacccctggga
gaggatgtgaagccggagcctgagcccacaccaccccctcctgcgccggtaaagaaacct
gttgaagtgaaagagaaagtttcccaaccccagaatgttgcagctaaaccagccaagaag
ccgccagaaccagcagagagttcatcagcagcgtctgcagaggaaaagagtgcttctgga
ggggtgttgagttggttctcccagggactggacagtgtgctgcccaagccagtggacagt
ctgcggctgcccagagccaatgcagagacagagcagcataccaaacaggaggaacagaaa
aaagtgcctcaggtcaaggagaatgcagcagccacaactagcgagccagaagaagagcag
ggcggggtgttcagctggatagtgcagggactagccaaggtggtcccccagcccgaggac
aagtataaagattctgaagtggaggagaaccccacagaggtggaaacagtcaaagaggag
gaaaagccaccgccgccagtggaagaaccggcaattaaaattatcgaggttgtgtcagtg
tcggaggattcgaaagacgccttgtcagaaatcgacaatgcagctcagaccatcccttcc
ttcacagcaagcacggccagtgtgttcagctggctcaaacaaggacttgagaaggtggtg
ccccagcctgcagagctgcacgcgcctctcaacacagagactgcgcagaagcagaagctg
gcagaaaagaaggaggaagcacctgcagctaaacctgaagcaccagcgaagaaagaggaa
gtaaaggagccgcccccacctgttaaagaggcagcaccactcgcagagccagcgaaagtc
tcagaagaagctcctaaaccaaccagtactgtaagctggtttgttcaagggcttgagaag
gttgttccacagcctgtgacgagatccaagcaggacaggacagaggagaaagatgatgga
acttcaagtcaagtgcaagaaatctctatcctcccggagactgtggaggacattgtggtg
gaggaggtagactcggactgggagaatgaaaaacaagaagagcccgagggacagctgacc
caaccagagcctgaaaaggaggagaccccagcaatgaccgtgcaggagctggagccagat
caggagcagcagggtcagcaagaggaaacacagggggaggacacacagaccctggcagcg
caacaccaacagccacagaaaccactcattcagacccgcatagtggagctggaagacgca
gagacgcagacagagagatggacacctctcctccaacagcaacaagcagaggccgctgag
gaaaaaagtcaagaagagaaggcggagacagagcactctgaggaggaagatttgccctat
atcccagaggaggatgaagaggatccagagttacaggttacgtacgagcagagtgaggat
gaggaggagatcttagagtgcctggtggacgtgtgtccggcccggggcttccccagccct
gtcagagagaagccaggacaggaagtcaaagttgtccaagaggtagagccagtaaggtta
ccagaaccaatacaggaagtggagccaaagcaggaagtggagacattacaagaaccagag
cccgtacaggaagtggaaccagaaccagagccagaactagaaccagaaaaggaagttggc
ccagacctggagttagaccacctagtccgtgaatcaccccaactcccccggagcccttcc
ccctcctcccccagcagcgctctagagctccccaacgttcccagctaccggacccgcagc
ccccgcctgccccccctcggagtccagagccaggtgtcaggagtggtgaaccccggcttc
tccaaggaagagcggcccaccggccgtctaagagagggctccaaggtgagcctgcacccg
gctgtaaacgtagaagatgtagactcagctggagactccagcagcgcccccggatctctc
tcactcccgtccatcgttcacccgtcgtcagcacacgccagcaccaccctgaccgtgcct
ggagtccctgccacagccaggagaaagaagctgtattcccaaggggacagtgtggaagag
accgagactacaatcaaagcctggcccagtcaatgcagtctgcaaccagacgaggaggaa
gatcgggcaccgtctgtgaccagccagaccagcgccatcgtgaacgagaggctccaggag
ctggtcaagttgtttaagggccgaacggaaaaagtgaaggagaagctgattgaccctgac
agcagctcagatgaggagagcccctctgcttctcccgcgaagaaagccccgccccctccc
cccgatgtgaagaaggaggagaagaaagaggaggaggaagaggagcattactgcgagatg
ctgtgctgcaaattcaagaccatgccctggatgatgcggctgaaggaataccgcttcccc
gcaagcatcgacccctacaccaatctgatgtacgtgctgtggctgttctttgtgaccttg
gcctggaactggaacctgtggctgatccccgtgcggtgggcgttcccgtaccagactccc
gataacctttacctgtggctgctcatggactacctgtgtgacctcatctacatcctggat
atcttcatcttccaggcccgcctacagtttgtgcgcggcggagacattatcactgacaaa
aaggacatgagagaaaattatatgaaatctcaaagattcaagatggatgtgatttccctt
ttccccctggatctgctgtatttaaagctgggtgtggtatcagtcctacgattcccacgg
ttattaaaatatagcgccttctacgagtttaacgaccgtctcgaggcaattctgagtaaa
gcatacatttacagagttatcataacgacgggatatttactgtactgcctgcactgcaac
gcctgtctcttttactgggcatctgactacgaaggtcttggatcaacaaaatgggtttat
gatggagtgggaaacagttatatccgatgttactactttgccgtgaagactctgatcacc
atcgggggcctgcccgacccaaagaccctcttcgaaatcatcttccagcttctcaactac
ttcatcggagtgttcgctttctccgtcatgattggtcagatgagagatgtggtcggggca
gcgacagcggggcagacttattaccgagcctgcatggacagcaccatcaactacatgaac
ttgtacaagattcctcgcagtgttcagaatcgggtcaagacctggtacgactacacctgg
cagtcccagggcatgctggatgagcaggaactgctggtgcagctcccggataagatgaga
ctggacatcgctgtcgatgtcaattaccagatcgtagcgaaggtggcgctctttgagggt
tgtgacagacagatgatttatgacatgctgaagaggttgaagtctgtggtgtacctgccg
ggggattttgtctgtaagaagggtgagattggaagagagatgtacatcatcaaagctggg
gaggtgcaggtggtagggggtccggatgggaagaccgtctttgttacactgcgaggagga
tctgtgttcggggaaatcagcctgctgtctgtaggaggtgggaacaggcggacagctaac
gtgatggcacacggtttcgccaacctgtttatcctggacaaaaaggacctgaacgagatt
ctcatccactaccccgagtcgcagaaggtgctgcgcagaaaggccaaaaaaatgctaacc
aaagacaccaaaaaggcagagggggttgagccaaagggggtacagcacgtgatcccccct
agacctgagacccccaaactcttaagagctgcactcgcactcacccttaaaaccagaaaa
agcgggtccttcagcaagctcaagatgaagaaatccagctctgtggagccccagccttcc
agctcgatgcccgtgccgcctgcctccccaatgcaccgccgctcgcccgtcccgcagacc
aagctagcggaggatgacgatgatacggaggacatggtgtcggagagtgcggacggctcc
atgctgttccgcatgagcccttcacacacaggcgaagaccaggtcctgaccgtggaaggg
gtgcccaaagagaaagaggaccccaaggaataa
DBGET
integrated database retrieval system
