Acipenser ruthenus (sterlet): 117424516
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Entry
117424516 CDS
T07327
Name
(RefSeq) E3 ubiquitin-protein ligase RNF135-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
117424516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117424516
Enzymes [BR:
arut01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117424516
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117424516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-C3HC4_4
zf-RING_2
zf-C3HC4
zf-C3HC4_3
zf-B_box
zf-C3HC4_2
ANCHR-like_BBOX
zf-RING_5
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
117424516
NCBI-ProteinID:
XP_033896798
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All DBs
Position
17:32240513..32245060
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AA seq
556 aa
AA seq
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MASRSEIRELECVICAELFTDPTTICCGHSYCMECIMTFRQSKTNKYNKYSCPICKDPLG
KEPELKKNTTLCALVELSKTAEPKQPLSPTASEDGTHHSQCDICNPERATATCLTSNMSY
CCKHVETHYENGHLKSHKLASAVKTCTKVCSKHRNVIEFVCKTDGEYLCVDCVAAHPACS
YSSVHGEFDKKKETLKTKLESVTSAIQATEENLAKRSKEKREIEESAARINESLSREFAE
LRQVLEEREKAALSAVRSSQKAASSRVSQIIHGLSSARDALQRKKSELELVNVTDWFEFL
RTDLPETEESSLAVDEESTALIQEEGSAVKDAIADLKDDVQSKLDNAIKAIKQTQTEEIT
EAVPESEAAEPENDTAPKRSAELIQCFANLTFDPNTAHKHLALSEGNRRVTVKRNNRSVP
YMQERFTISQVMASTGFSEGCHYWEVNTRLSKGWAIGIAYQRLGRADTLGRNALSWCVEW
SRSRFSAWHGSVEVRLPQGELSGIGVHLKCDEGKVSFYAVSETLLHTFDVQFSEPVFPVF
WLFGLDKGNSLSFVEL
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaggagcgagatccgtgagctcgagtgtgtgatctgtgcggaattatttaca
gatccgaccacgatatgctgcggacacagttattgtatggagtgtataatgacgttccgt
cagtccaaaaccaacaaatacaacaaatacagctgtccaatatgcaaggacccacttggg
aaggaacccgaactcaagaagaacactacactgtgcgccttagtcgagttatccaaaacc
gcagaaccgaagcagcctctgagtcctaccgcctccgaggatgggacccaccactcccag
tgcgacatctgcaacccagagagggctacggcgacgtgtctgaccagcaacatgtcgtat
tgctgcaagcacgttgaaacgcactacgaaaatggacatttaaaaagccacaaactcgcc
agtgcggttaaaacctgcacgaaagtgtgcagcaagcaccggaatgtcatcgagtttgtg
tgcaaaacagacggtgaatatctgtgcgtggattgcgtggctgcgcatcccgcgtgtagt
tacagcagtgtgcacggagagtttgacaaaaagaaagagaccctgaaaacaaagctggag
tcggtgacatcagccatccaagcaacagaggagaacctggcaaagcgaagcaaagaaaaa
cgcgagatcgaggaatctgctgcaaggataaacgagtcactcagcagagagtttgcagaa
ttaagacaggttttggaggagagagagaaggcggcgctgagtgccgtccgtagcagtcag
aaggcggcgagcagtcgggtgtcacagatcattcacggtctgagctcagcccgggacgcc
ctgcagagaaagaagagcgagctggagctggtgaatgtgacagactggtttgaatttctg
aggactgatctgcccgagactgaagagagttcccttgctgtggatgaagagagcacagct
ctgatccaggaggaggggtctgcagtgaaggatgccatcgctgacctcaaggacgacgtt
cagtctaaactggacaacgccataaaggccataaagcaaacacaaacagaagaaattaca
gaagctgttccagaatcggaagctgcagaacctgaaaatgatactgccccaaaaagatcg
gctgaacttatccagtgttttgccaacctcacctttgacccaaacacagcccataagcac
ctggcactgtcagaaggaaaccggagagtgacggtgaagcggaataaccggagcgttcca
tacatgcaggagcgcttcacaattagccaggtcatggcttccacaggcttctctgagggc
tgccactactgggaggtgaacacccgcctcagcaaaggctgggccatcgggatagcctac
cagcggctgggacgcgcagacacactggggaggaacgccctctcgtggtgcgtggagtgg
agcaggtcacgcttctccgcctggcacggcagtgtggaagtgaggctccctcagggggag
ctctctgggataggggtgcacttgaagtgtgacgagggcaaggtgtcgttctacgccgtg
tccgagaccctcctgcacacctttgatgtgcagtttagcgagccagtatttccagtgttt
tggttgtttgggctggataagggtaattctttgtcttttgtggagctgtag
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