Acipenser ruthenus (sterlet): 117424591
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Entry
117424591 CDS
T07327
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
117424591
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117424591
Enzymes [BR:
arut01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117424591
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117424591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-C3HC4_4
zf-RING_UBOX
ANCHR-like_BBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-B_box
Casein
Mt_ATP-synt_D
DUF4407
Motif
Other DBs
NCBI-GeneID:
117424591
NCBI-ProteinID:
XP_033896973
LinkDB
All DBs
Position
17:complement(32022196..32030870)
Genome browser
AA seq
694 aa
AA seq
DB search
MAVEPSSLSSLEEELTCSICLSIFNNPVTTPCGHNFCLSCLELTWKDDLAIGYSCPQCRH
QFYAKPTLHKNTVLATVVATVSKSLKDKSQDETKGAVLDSTVIFCDTCMVNKASKTCLTC
MVSYCDSHLRPHHENPVFQGHQLTEPLPDLQQHICKEHHKTLEFYCKDHNKCICGACLHS
HLTCRFASLDGEIAEKEKKLKEKVVTLRGQIEKTKNVIFEMKGEQSSLRDSAANRKAALE
AEYRVMKDLIEKDEREAMNLVDTEEQSAQARIQSLMHKITKNIEEMSSCKDQIESVLAQG
QRITLLQCTVEFPQLPTFTHAPGINMNSKQLKMYNSSATSLKKYLTDVLSLPVEERVQML
NAAPVKTVEKGKEKSDSSIDQTSVVAGDNTPTKKPRERSKNRSKSPKPPKLKDLPKNKNP
QPLPVVSVPVPLFSGNSLLGAFYYGHTSQNYMSKFVKPINPTEVKNRHDLQQKNPQPLPV
SVPVPLFSGNSLLGDFVSKIDKPFNPTEVKNRQDLLQYAFVLTLDARTAHKRIVISDNFT
KASVSDELMTYPDSPARFTVCSQVLCSKGFSRGRHYWEVKMTSSNFCAIGVASGSIERKG
PTSKLGRNKESWCIEWFNVKLSAWHDQRETVLENPSSSRVGVLLDCDGGSLTFYSISDRV
YPIHTFSCHFPEAVYPAFWLFSSGTAVSLCKPTA
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgaaccgtcgtctttgagcagtctggaggaagaactgacctgttccatctgc
ttgagcattttcaacaacccggtgaccacgccgtgcggacacaacttctgcctgagctgc
ctagagctcacctggaaggacgacctcgcgattggctacagctgccctcaatgcaggcac
cagttctacgccaaacccaccctgcacaaaaacaccgtgctggccactgtggtcgccacc
gtcagcaagtctctgaaagacaagagccaggacgaaacgaagggagcggttttggattcg
actgtaatcttctgcgacacctgtatggtcaacaaagcctcgaagacttgtctgacctgc
atggtctcctactgcgactcccacctcagaccgcaccacgagaaccccgtctttcagggt
caccagctgaccgaacccctgcctgacctgcagcagcacatctgcaaagagcatcacaaa
acgctcgagttttactgcaaggatcacaacaagtgcatctgtggggcttgcctgcactca
cacttaacctgtcggtttgcttcgcttgatggcgagatagccgagaaggaaaaaaaattg
aaagaaaaagtggttacgctgagaggacagattgagaaaacaaagaatgtaatttttgag
atgaagggagagcagtcgtctctgagagattcagcggcgaacagaaaggctgcacttgag
gcggagtaccgcgtgatgaaagacctcatcgaaaaggacgagagggaggcaatgaacctg
gtggatacagaagagcaaagtgcccaagcccggatccagagcctcatgcacaaaattaca
aaaaacattgaggagatgagcagctgcaaagaccagattgaaagcgtgctggctcagggg
cagcgaatcacacttctgcagtgcacagtagagtttccacaattgccgacatttactcat
gctcctggaatcaacatgaattcaaagcaactgaaaatgtacaactcaagtgccacgtct
ctcaagaaatacctcacagacgtattgagcctgccagtggaggagagagtccaaatgctg
aatgcagcaccagtcaaaacggtggaaaagggaaaagaaaaatctgacagcagcatagat
cagacttctgttgtagctggggacaacacccccacaaagaagccaagggagaggagcaag
aaccgcagtaaatctcccaaaccaccaaagctcaaggatctgcctaaaaataaaaatcct
caaccactgcctgttgtttctgtacctgttccactgtttagtggaaatagccttctggga
gcattttactatggacacacatctcaaaattatatgtcaaagttcgtcaaaccaatcaat
cctacagaagtgaaaaataggcacgatcttcagcaaaaaaatccacagccactgcctgtt
tctgtacctgttccactgtttagtggaaatagccttctgggagattttgtgtcaaagatc
gacaaaccattcaatcctacagaagtgaaaaatagacaggatcttctgcaatatgctttt
gtccttacactggatgccagaaccgcacacaaaagaatcgtcatctcagacaatttcacc
aaagcatcagtctccgatgagctgatgacgtacccggacagcccagcgagattcacagtc
tgctcccaggttctgtgctccaaaggattctccagggggcgccactactgggaggtgaag
atgaccagcagcaacttctgcgccatcggcgtggcctccggcagcatcgagcgcaagggg
ccgaccagcaagctggggaggaacaaggagtcgtggtgcatcgagtggttcaacgtgaag
ctgtccgcctggcacgaccagcgtgagacagtcctggagaaccccagctccagcagagtc
ggggtgctcctggattgcgacgggggctccctcaccttctacagcatctcagacagagtg
taccccattcacaccttctcatgccactttccagaggccgtctatccggccttctggctc
ttctccagcggcaccgcagtgtctctgtgcaagccgactgcctaa
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