Acipenser ruthenus (sterlet): 117424625
Help
Entry
117424625 CDS
T07327
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117424625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arut03019
]
117424625
Messenger RNA biogenesis [BR:
arut03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117424625
mRNA degradation factors
5'-3' decay
Decapping complex
117424625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_HPS5
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
WDR55
CelTOS
Beta-prop_EML_2
EIF3I
Motif
Other DBs
NCBI-GeneID:
117424625
NCBI-ProteinID:
XP_033897067
LinkDB
All DBs
Position
17:3245597..3265187
Genome browser
AA seq
1425 aa
AA seq
DB search
MASNSNIDIEDATQHLRDILKLDRPGHSGEETGRGLPGEAGWRHWALGRRRWDGCDTSSE
TPKKSTSFNGELNGLMGADLIAGGDRAAMSEISIHSPEDMNMQEKQTICLSGEDSSTCII
ISARDVEIVASHDSCINSKARGSNKVKIQPVAKYDWEHKYYYGNLIAVSNSYLAYAIRGA
NSIAMIRVLNIGTAERTLLKGFTGGVTDLAFAHLNSNQLACVDEAGNLFVWQLTEENGKI
QDEIIVHVTRPESTPLNGNRRIIWCPFIPEENEENAEDGCQTLALLHEDRAEVWDLEIIR
SNNSLWPMEATDFKEGFITVKGHNARISEGALSPDGTVLASASHDGCVKFWQIYIEGQDQ
PRCLHDWKPHNGKPLSCLLFCDNHKKQDPEVPFWRFLITGADQNQELKMWCTVSWTCLQT
IQFSPDPFNSSVLPSLKASLDLSAEYLILTDVQRKVLYVMELLQDQEKGRASFTAISEFL
LTHPVLSFGIQDVSRSRQRHTEVLPAEEESESVTAEGSQGPVESKAGVQIKLYCVHTKSL
QDVQIWFQPHLSSGNSTFLPPSGSHEDFSFADQLTDVSMEGLGSDKESGRGSPHDLRRIS
DLPTPADFLSATSDFKPKLMTPDAFMTPSASTQQQISASPGSSVSTLTAVTGMSSNCVGD
SGMSRTGEEMTKLSLDSSMTLSNSTDMQGSPRNNSILIPGLADQLPFKTVQVIPPANPPL
SLDLQSIEPILMPQASPTRERSPDVISSASTAMSQDIPEIASETLQRGLAASGGLPAEVL
ELTLHSDSMASAASALHLLSPRNRHNSEHSHHSLDMGSGEAERLSSTPSLLETALSQESA
AAMAAAATDNSGSQPWPAAPDITRETRNSLIDSSREDVKEKHKSSSFHRHAYHLPQHDSQ
DASAEQSDHDDEVASLASSSGNYGSKSTHRLPVKEWKSPRGSPKLKRKSKKEEGDVAQAR
LSDHQMSPELQEELLSLVRCQQREISELRQSQLELMQRLTNHMDAVQSSIMGHVERVMIT
QQEQEQRRMERILADGHDRNRQFQEQLSQQLSQSLSNTLSNRLDKTVRDEMKKTVPQSIS
KSLEPVTGQLSNTIAAKLTAVEGTLKENITKMVKSKNTTDAIGRAAADALQGPIQAAYKE
AFQSIVLPVFEKGCQSMFQQINDSFKSGTQEYIQQLENHLKNKKLQEHEVRHPMMGQLQQ
MIDTFQNSTDQLSSNITASMRSEVQHQLHITVGNLQDSILTQVQRIVKGEVSMAMKEQQA
AVTTSIMQAMRSAAGTPIPSSHLDYQTQQANILQLLQQGQLNQAFQQALSAADLNLVLYV
CETVNSQQVFGQNPCPLIQPVLLSLIQQLSTNLATRTELKISYLEDAVMNLDHGDPVTRD
HMSSVLSQVRQKLFQFLQADPHNVLSKRARRLMMMLQGLINHGMS
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaactccaacatagatatcgaggatgcaacccaacaccttcgggacatcttg
aagctggaccggcccgggcatagcggtgaggagacagggagggggttacccggagaggcc
gggtggcgccactgggcactaggccgcagaagatgggatggatgtgatacctcaagtgaa
accccaaagaagtcgacctctttcaacggagagctcaatggtttgatgggagcagatctc
atagcagggggagacagagcggccatgtcggagatatctatccatagcccagaggacatg
aacatgcaggagaaacaaaccatctgcctctctggagaggacagctccacctgcatcatt
atatctgccagagatgtggaaatagtggcaagccacgactcctgcatcaacagcaaggcc
agaggcagtaacaaggtaaaaatacagccagtggcaaagtatgattgggagcacaagtac
tactatgggaacctgatagctgtatccaactcctatctcgcatacgctatcagaggtgca
aacagcattgctatgatccgtgtgctgaacataggcactgcagagcgcactcttttgaag
gggttcactggcggagtgacagacctggcctttgctcatctcaactctaatcagctggcc
tgcgtggacgaggctggaaacctgtttgtgtggcagctaactgaagaaaatgggaagata
caagatgagattatcgttcacgtcacgaggccggagagcaccccattgaacggtaacagg
aggatcatttggtgccctttcataccagaggagaatgaggaaaatgcagaagatggatgt
cagactctggccttgctgcatgaggacagggctgaagtttgggatttggaaatcattaga
agcaacaacagcttgtggcccatggaagcaactgatttcaaagaaggctttatcactgtc
aaaggacacaatgcacgtatcagtgaaggtgccttgtcacctgacgggacagtccttgcc
tcagccagtcatgatggatgcgtcaaattctggcagatctacattgaaggacaggatcaa
ccgagatgccttcatgactggaaaccccacaatggtaaaccactgtcttgcctgctgttt
tgtgacaatcacaagaagcaagaccctgaagttccattctggagattcctgatcacgggt
gcagatcagaaccaggagctgaagatgtggtgcactgtgtcctggacctgcttgcaaact
atccaattttcaccggatccttttaactccagtgttcttccaagtctgaaagccagtttg
gacctttctgctgaatacctgattctgactgatgtacagaggaaagtgctgtatgtaatg
gagctgctgcaggaccaggagaagggcagagccagcttcaccgccatctcggagttcctg
ctcacccaccctgtgctgagtttcggcatccaggacgtgagccgcagccgccagagacac
accgaggtcctgccggccgaggaagagagcgagagcgtgactgcggaaggaagccaaggt
cctgtggaatctaaagcaggagtccagataaaattatactgcgtgcacacaaagtcactc
caagacgtgcagatctggtttcagccccacctgagttctgggaattctacgtttctgcct
ccctctggctcacacgaggacttcagttttgcagaccagctgacagacgtgagcatggaa
gggttgggctcagacaaggagtcgggccgtggctctccgcatgacctccgcaggatatcc
gacctgcccactccagctgacttcctgtcggctaccagcgactttaaacccaaactcatg
actccagatgcgttcatgactcccagcgcttcaacccagcagcagatctcggcctctccc
ggcagcagtgttagcactctgaccgcagtaaccggaatgagcagcaattgtgtcggcgac
agtggaatgtccaggactggtgaagaaatgacaaagctttccctggatagcagcatgact
ctcagtaacagcactgacatgcagggcagccctcgaaacaactctatactaatccctgga
cttgctgaccagctgcctttcaaaactgtccaggtgattcctccagctaaccctcccctc
tccctggacctgcagtccattgaacccatcctgatgccccaggcctctccaacccgcgag
cgctctcccgacgtcatttcctccgcctccacggccatgtcccaggatatccccgagatc
gcctccgagaccctgcagcgtggactggctgcttcggggggcctgcctgccgaggtcctg
gagctcaccctccactcggacagcatggcctctgctgcctcggccctgcacctcctctcc
cccaggaaccgccacaactctgagcacagccaccactccctggacatgggctccggggag
gcggagcggctgtccagcaccccctccctcctggagacggctctctcgcaggagagcgca
gcggccatggctgcagctgcaacagacaacagtgggagccagccctggcctgctgcccct
gatattaccagggagaccaggaacagcctgatcgacagctcgcgtgaggatgtgaaagaa
aagcacaagtcttcctcattccacagacacgcctaccacctcccccagcacgacagtcag
gatgccagcgcagagcagagtgatcatgatgatgaagttgcaagccttgcatcctcctca
ggaaactatggttccaaatccacccacaggctacctgtgaaagaatggaaatctccaagg
ggttccccaaaattaaagagaaagagcaaaaaggaggagggggatgttgctcaggcaagg
ttatccgatcatcagatgagccctgagctgcaggaggagctgctgtccctggtgcgctgt
cagcagagggagatctcggagctgaggcagagccagctggagctgatgcagaggctcacc
aaccacatggacgctgtccagagctccatcatgggccacgtggagcgagtgatgatcacc
cagcaagaacaggaacaaaggagaatggagcggatcctggccgatgggcatgaccgcaac
agacagttccaggagcagttgtctcagcagctgtcgcagtctctctccaacaccctgtcc
aacaggctggacaagaccgtccgggacgagatgaagaagactgtacctcagtctatatcc
aagagcctggagccagtcacaggtcaactgagcaacacaattgcagctaaactcaccgcg
gtggagggaacactgaaggagaacataaccaaaatggtgaagtcaaagaacactacagat
gccattgggagagcggcagcagatgcgttacagggacccatccaggcagcatacaaggag
gccttccagagcatagtgttaccagtctttgagaagggctgccagtccatgttccagcaa
atcaatgacagctttaagagtggaacgcaggaatatatccagcagcttgaaaaccatctg
aaaaacaagaagttacaggagcatgaggttcggcaccctatgatggggcagctacagcag
atgatcgacactttccagaactccacggaccagctgtcttccaatatcacagccagcatg
cgctccgaagtgcagcaccagctacacatcacagttggaaacctgcaggactcgatcttg
acccaggtccagcgcattgtgaagggtgaggtgagcatggccatgaaggagcagcaagct
gcagtcaccaccagtatcatgcaggctatgcgctcagccgctgggacgcccattccgtcc
tcgcatctcgactaccagacccaacaggctaacatcctccagctgctgcagcaagggcag
ctcaaccaggctttccagcaggcactgtctgctgctgacctgaacctggttctctacgtg
tgtgagacggtgaactcccagcaggtttttggacagaacccctgtccacttatccagcct
gtgctgctgtcactcattcagcaactctctactaatctggctaccaggactgaactcaaa
atcagttatctggaggacgcagtgatgaacctggaccacggtgacccggtcactcgagac
cacatgagctccgtcctcagccaagtccgacagaagctgttccagttcctgcaggcagac
ccacacaatgtgctgagcaagcgggcacggcggctcatgatgatgctgcagggactcatc
aaccatggcatgagctaa
DBGET
integrated database retrieval system
