Acipenser ruthenus (sterlet): 117424819
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Entry
117424819 CDS
T07327
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup93-like
KO
K14309
nuclear pore complex protein Nup93
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117424819
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arut03019
]
117424819
Messenger RNA biogenesis [BR:
arut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117424819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
117424819
NCBI-ProteinID:
XP_034784347
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Position
17:2817783..2839898
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AA seq
820 aa
AA seq
DB search
MDAEGFGELLQQAEQLAAETEAISELPHVERNLQEIQQAGERLRARTLTRTSQETANVKA
SILLGSRGLDISHISQRLESLSAATTFEPLEPVKDTDIQGFLKNERDNALLSAIEESRRR
TFATAEEYHRESMLVEWEQVKQRILHTLLASGEDALDFTQEAEPSFLSDTGPAGRSSLDS
VEVAYGRQIYVFNEKIVNGHLQPSLGDLCASVAERLDDKNVSEMWAMVKQMTDVLLVPAR
DALNSRTSVEMQMAFVSRALQFLEQSYKNYTMVTVFGNLHQAQLGGVPGTYQLVRSFLNI
KLPGPIPGLQDGEVEGHPVWALIYYCMRCGDLVAAMQVVNRAQHQLGEFKNWFQEYMNST
DRRLAPTAENKLRLHYRRALRNNTDPYKRAVYCLIGKCDITDNHGEVADKTEDYLWLKLN
QVCFEEDSTSSPQDRLTLPQLQKQLLEDYGESHFAAGQQPYLYFQVLFLTAQFEAAVAFL
FRIERLRSHAVHVALVLYELRLLLMSSGHSTRLLSQEPVDPPMIRRLNFIRLLMLYTRKF
ESTDPREALQYFYFLRNEKDSQGENMFMRCVSELVIESGEFDMLLGRLEKDGSRKPGVID
KFAGDTRPFISTVAREAENKGLFEEAVKLYELAKNPDKVMGLMNKLLSPVVSQVSAPQSN
KERLKNMALAIAERYRTQGISAEKSVDSTFFLLLDLITFFDEYHAAHVDRAYDVMERLKL
VPLSQDSVEERVAAFINFSDEVRHNLSEVLLATMNILFTQYKRLKGTTPASPARPQRALE
DRDSQLRTQARALITFAGMIPYRMAGDTNARLVQMEVLMN
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggatgctgaaggattcggggagctgctccagcaggctgagcagctggctgcagagacg
gaggcaatctccgagctgccccacgtggagcgaaacctccaggagatccagcaggcgggg
gagaggctgagggccagaaccctgacccgcacctcgcaggaaactgccaacgtcaaggcc
tccattctgcttggctccagaggactggatatttctcacatctctcagcgactggaaagt
ctgagtgcggctacgacatttgaaccgctcgagccagtgaaggacacagatatacagggc
tttctgaagaacgagcgtgacaatgcgctgctgtcagccatcgaggagtccaggaggagg
accttcgccactgcagaggagtaccacagggagtcgatgctggtggagtgggagcaggtg
aagcagaggatcctgcacacgctgctggcttcaggagaggacgctctggacttcacccag
gaagctgagcctagtttcctcagcgacacgggtcctgcaggacgcagctctctggatagc
gtggaagtggcttatgggcggcagatttatgtgttcaacgagaaaatagtaaacggacac
ctgcagcccagcctgggggacctgtgtgcttctgtagcagaacgtctggatgacaagaat
gtctctgagatgtgggccatggtgaagcagatgacggacgttctactggttcctgcccgg
gacgcgctgaacagccgcaccagcgtggagatgcagatggcgtttgtgagtcgggccctg
cagtttcttgaacaaagttataaaaactacaccatggtgacagtcttcggtaacctgcat
caagctcagctgggaggagtgcccgggacctatcagcttgttcgcagttttcttaatata
aaactgcctggccccattccagggctccaggacggggaggtggaagggcatcccgtgtgg
gctctgatctactattgcatgcgctgcggggatctggtggcagccatgcaggtggtgaac
cgggcgcagcaccagctgggggagttcaagaactggtttcaggagtacatgaacagcacc
gacagacgattggctcccacagcagaaaacaagcttcgactgcattacagacgcgccctg
agaaataacacagacccctataagagagccgtgtactgcctgatcgggaagtgcgacatc
actgacaaccacggagaggtggcggacaagaccgaggattatctctggctcaagctgaac
caggtttgcttcgaggaagactccaccagctcgccgcaggacagactgaccctgccacaa
ctccagaaacagctgcttgaagactacggagagtcgcacttcgctgccggtcagcagccc
tacctgtatttccaggtgctgttcctgacggctcagtttgaggcggccgtcgccttcctg
ttccgcatcgagcggctgcgcagccacgctgtgcacgtggccctggtgctctacgagctc
agactcctcctgatgtcctctggccacagcacacgtctcttgagtcaggagcctgtggat
cccccaatgataagaagattaaatttcatccgcctgttgatgttgtacacaagaaagttt
gagtcgaccgacccaagagaagcgcttcagtacttttattttctaagaaacgagaaagac
agccaaggagagaacatgttcatgcgatgtgttagtgagcttgtcattgaaagcggagag
tttgacatgcttcttgggagacttgaaaaagatggcagcagaaagcctggagtaattgat
aagtttgctggagacacgcggccattcatcagcacagttgctcgggaggcagagaacaaa
ggattatttgaagaagctgttaaactatatgaacttgcaaagaatccagacaaggtaatg
gggctgatgaacaagctgctcagtcctgtggtctcacaggtcagtgctcctcagtccaac
aaagagaggctgaagaacatggccctcgccattgcagaacggtatagaacgcagggcatt
tctgcagaaaagtcggttgacagcactttctttcttctactggaccttataacttttttt
gacgagtaccacgctgctcatgtggaccgagcgtatgacgtgatggagcgtctgaagttg
gttccactcagccaagacagtgtggaggagagggtcgctgccttcataaacttcagtgat
gaagtcagacataacttatccgaagtgctcctggccaccatgaatattctgttcactcag
tacaagaggttaaagggcacgaccccagcatcccctgcacgaccccaaagagcactggag
gacagggactctcaacttcgaacccaagcccgtgctctgatcacgtttgcaggtatgatt
ccgtaccgcatggcgggggacaccaacgctcgactggtgcagatggaggtgctcatgaac
tag
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