Acipenser ruthenus (sterlet): 117425028
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Entry
117425028 CDS
T07327
Name
(RefSeq) cadherin-15-like
KO
K06809
cadherin 15, M-cadherin
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04514
Cell adhesion molecule (CAM) interaction
arut04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
117425028
04519 Cadherin signaling
117425028
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
arut04515
]
117425028
Cell adhesion molecules [BR:
arut04515
]
Cadherins
Major cadherins
117425028
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
AF2028_C
Fibulin_C
RMI2
Msap1
Motif
Other DBs
NCBI-GeneID:
117425028
NCBI-ProteinID:
XP_033897551
LinkDB
All DBs
Position
22:7113350..7131517
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AA seq
804 aa
AA seq
DB search
MKMYSKVFAMFLLLVAVFYQVGSTSVTEQQAEEDSAEVLFPWRQKTVGSSGLQRAKRAWV
IPPINIPENTKQIPKNVVQIKSDTLEPGKVLYKIQGPGVDEDPKGFFEINETTGWVILMN
VLDRETHSKFKIKAYALDLSGKPMEDPTELEIHVVDQNDNRPTFVQEEFTGRVHENSKPG
TSVMQVEATDADDIETDNAALAYSIIGQESIPPFRINKTMFGIDELTGIISTRDVGLDRE
EVEGFNITLQVADMSGSGLTSYSSALIYINDINDNAPNFTSETFQMSVMENKVQADIGRI
TVTDEDEPQTENWWVKYTITAGDPEGNFDIRRDDATNEGIVSVVKLLDYESLNYYELVVM
MENESPLSLMGPKTPPSSATVTINVLNQNEPPGFRQSPLRLSVPEGSPAGTLLASNIALD
PDRQALRYDVEYDPDQWLFLDDESGEITANKEITKNSRFLTKDVYMAVITVEDTGDYPST
ATATVYITVLEVNDFAPEPFSLSKFMCNDPEKGSGLVLSATDKDQPPHSAPFLFSLDDSE
PENIRNWTLHRINDTHAALRLLSAVVEGEYVLPVVLSDSGTPALAEIHMVNVTVCHCNNE
GDCQPILAAIFSAGMGLSLGALLIILGSIVLLLLLLLIMAAVEQCRQRPIRKGMLGISDD
DIRDNILNYDEQGGGEEDENAYNMDQLRNPNEIIPPPTTAMPRGKQPVRKDTPYNYPSPS
YPRKTPADPIDIEDFINDGLDAADKDPNVPPYDTALIYDFEGDGSLAGSLSSIASGSSDG
DQDYDYLNSWGPRFNKLANLYDKH
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgtactccaaggtgtttgccatgttccttttgctggtggctgttttctaccag
gtaggcagcacgtctgtcacagaacaacaggcagaggaggacagcgcagaggttctgttt
ccttggcgacagaagacagtggggtctagtggattacagagagccaagagagcctgggtt
attccaccaatcaacatccctgagaataccaagcaaatcccaaagaatgtagtccagatc
aaatctgacactctggagcccgggaaggtgctgtataagatccaaggcccgggggtcgat
gaggatcccaaaggattttttgaaatcaatgaaacgacggggtgggtcattctaatgaat
gtgcttgacagggaaacccacagcaagtttaagatcaaagcctacgccctggatttgagc
gggaaacccatggaagaccccactgaactcgagatccatgtggtggatcagaacgacaac
cgacccaccttcgtgcaagaggaatttaccggacgcgttcatgaaaactctaaaccaggt
acgtctgtcatgcaggttgaggcaacggatgcagacgacattgagacagataacgcagcc
ctggcgtactccattatcggccaggagagcatcccgccattccgaatcaataaaaccatg
ttcggaatcgatgaactcaccggtatcatctccaccagggatgtagggctggatcgagag
gaggtggaggggtttaatatcacactccaggttgctgacatgtctggctctgggctgacc
agctattcctcagcactgatctacatcaatgacattaacgacaatgctcccaatttcacc
tctgagacgttccaaatgtcagtaatggagaacaaagtacaggctgacattggcagaatc
actgtgacagacgaagacgaaccgcagacagagaactggtgggtgaagtacaccatcaca
gctggggatccggaggggaacttcgacatccgcagggatgatgcaaccaacgaaggcata
gtgtctgtggtgaagctgctagattatgagtctctgaattactatgagctggtggtgatg
atggagaacgagagtccgctaagcctcatgggtcccaagacccccccgagcagtgccact
gtgaccattaatgtgctgaaccagaacgagccccccggcttccggcagagccccctgaga
cttagcgtccccgagggaagcccagccggcaccctgctagccagcaacatcgccttggac
ccagacaggcaggctctccgatacgatgtggagtacgacccggaccagtggctgttcctg
gacgatgagtctggggagatcacagccaacaaggaaattaccaagaattcccgcttcctc
actaaggacgtctacatggccgtcatcacagtggaagacacaggagactaccccagcaca
gccacagccaccgtgtatatcacagtgttagaggtgaatgactttgcccctgagcccttt
tctctgagcaagttcatgtgcaatgacccagagaagggttctggtttggttctgagtgct
accgacaaggaccagccccctcacagcgcaccctttctcttcagtttggatgacagtgag
ccagagaatattcggaactggaccctccacagaatcaacgatactcatgcagcactgcgt
ctgctctcagcagtggtggagggggagtacgtgctcccggtggtgctcagtgactctggc
acgcctgccctcgctgagatccacatggtcaacgtgacggtgtgccactgcaacaacgag
ggagactgtcagcctatcttagctgccatcttcagcgctggaatggggctgagcctggga
gcactcctcatcatcctgggcagcatcgtgctcctgctcttgctgttgttgatcatggct
gcagtggaacagtgtcgccaaaggcccatcaggaaaggcatgctgggaatctcagacgat
gacattcgagacaacatcctgaactacgatgagcaagggggcggagaggaggacgagaat
gcctacaacatggaccagctgaggaaccccaatgagatcatcccaccccccaccacagct
atgcctagagggaaacagccagtcaggaaagacacaccctacaactacccctccccctcg
tatccacggaaaaccccggccgaccccatcgacattgaggacttcattaatgatggtctg
gatgcagcagacaaggaccccaatgtgcccccgtacgacacagcgctgatctatgacttc
gagggggacggctcactggctggcagcctgagttccattgcctcaggcagctctgatgga
gaccaggactatgactacctcaacagctggggcccccgctttaacaaactggccaacctg
tatgacaagcactga
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