Acipenser ruthenus (sterlet): 117425584
Help
Entry
117425584 CDS
T07327
Name
(RefSeq) LOW QUALITY PROTEIN: rootletin-like
KO
K16469
rootletin
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
arut03037
]
117425584
Cilium and associated proteins [BR:
arut03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
117425584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rootletin
Motif
Other DBs
NCBI-GeneID:
117425584
NCBI-ProteinID:
XP_034760586
LinkDB
All DBs
Position
22:complement(23075038..23109053)
Genome browser
AA seq
1986 aa
AA seq
DB search
MSASGDPQSKIGGELKLEAVIQRLEESVLSSGDEKSFTLRGDAHDSPPTPLPARIREIVT
KNLSEDTPVAMASVISLQEENRILQQELSRVEDLLAESRAERDELAIKYNAISERLEQTL
RVETGERDRESLESRSLAQQNMELRRRLDEEQAAYKRKLQAYQEGQQRQAQLVQKLQAKV
LQYKKKCGELEQVVLDKSTELEQHRMTSRLDLSTGRIRPEEEEHSNDLENALIRLEEEQQ
RSASLAQVNAMLREQLDQASSANQALSEDIRKLTADWTKAREELEQREVDWRREEESFHT
YFSSEHSRLLALWRQVVGFRRHICELKSATERDLSEVRNELAKASRSAHASCLNLGANLR
ASESSSALALDKQSARQAQLEEQLRDKVRDMIQMQARCDTEKAELNARITELMVEVERMK
TQGEEKEKSSTSLTQRLEALEGSLSQEQAEREQEEVEALRAEIEALQQALRDITQAVLAD
SDTGVPVPRLEGEQDLMGSLGGVSVLRSPSPRRGASPRRSASPRRSFSTSLADPTLGAVR
AALTNRQIHLQELRGRYEGAQDLVASLRRQLAESETERWALEQRAQQLSEEREEAGRAKD
AAQRDADRLRSSTEHIGSEKTSLGKALQALQERVETLQQEGERLQLANAALQRERDCESE
EKEXALKERERARAETEKGQKQLEQAEARCSALRKELALVKEALQRQTLDKEVQETEKAG
LAEALCRAETSVAELTLACNRLKAEESTLRDSLAKMSSLNEGLAQDKIQLNKIIIQLEDE
KGSLMGQKREVEQEKASIRDELVRLEQEKLDLDSARHGLDLSLQDVEQSQEVLEERLRAL
QGQRAELQEQLAQVTRQRSSLLEDLSQAQREVERQGEGLVRAAREKEELTREKASLVVQL
TASERENHSLAEEVAAFRSEREALETSLFEVQQQLVQLESRREQLEAEHQALLRAKEALH
AELKRVRAEAEVGLVKLERDKELLVQKQSQTEQEAQVTLRSALTAQQEETDRLTHEKEAL
RLTLEAQRDEILYTLTREREEIVSRYEAEKEELNKEITELQQERDQSLLIAESEKQQALS
LKESEKTILSEKLTSVQHELGTTSMELERVRREAQSRQEQERVSAIVSGGGPLSCFGSTA
GLRVTGEAQVQDVRESQRKDILDLRRSLGDQDKERDTLHASNTELREAVKRAESERISLK
RLNEEKEQKLAVLEESRAASEREAAELRAGLREVERSRLEARRELQELRRQVKLLDSEKE
QRGREVAELQARVSLDEQREGDTRRESFGLKQRIMETEAVRDSARKEVSSLQRRMTELEA
ECRLRERELAAQLEEARGNEKKLQDNTRNLELRAEQARGELTELGLALSEAQGRISGLEA
ELTRLDGHKRELEFKLGSLHSTLSRTLGIGGRGRGNSPALRGRSHSPRRSLSPPKGLDES
RRSPLARMETPERGPASRPASPDRTDTPFPELDPETVRSALREFLQELRDTQRERDEART
QSGTLARQLGEMEADRDGTQQRLQQLQKSLAECEEGKRGADGRLSSAQTALMLQEELIRR
SERERKALLDKVATLERSVQGAESERRGTQDKINKLKAGEARLEAERRRLKEALEAAESR
GTKLELARRALEGELQRMKLGLGDKETEIQAAQDRIDTLQRQVSDSEMKASALKLELDRL
HLALARAEESEGTLKERLQSLAQCVAESNTSQAATQDRLLTLQKSLSASEQERRLLQERL
ESARSSVLEGKKNAGMLSERVQTLQSELGEMELKRGELEGQLQQHQELLRQRMESEEAAL
RSLEKLQGERALAQERLRSLQRAVAQLESEKREAERAAVRLEKDKAALRNTLDKVEREKL
KMEEGSMRLSAEKGRLDRSLSSVEQELVDSQRQIQLLQAQLGEMEQTQSQGLTEVSRRLQ
QDMQQETERLRGAQLQAERTLEARERAHQQRVKGLEEQVSTLKEQLQQELRRRQPHFSHS
SILSGN
NT seq
5961 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcctctggagatccgcagtcgaaaatcgggggagagttgaaactagaagccgtt
attcagaggctggaggagagcgtgttgtcgtcaggagacgagaagagcttcaccctgcga
ggcgacgcccacgactccccgcccaccccgctgcctgcacgaatcagagagatcgtcacc
aagaacctgagtgaggacactccagtagccatggcctccgtgatctctctccaggaggag
aacaggatcctccagcaggagctgtcccgggtcgaggacctgctggctgagagccgagcc
gagcgcgatgaactggccatcaaatacaatgccatcagcgagcggctggagcagaccctg
cgcgtggagacgggcgagcgagaccgggagtccctggagagccgcagcttggctcagcag
aacatggagctgcggagacggctggacgaggagcaggctgcgtacaagcgcaagctgcag
gcttaccaggaggggcagcagaggcaggcccagctcgtacagaaactgcaggccaaggtg
ctgcagtacaagaagaagtgtggggagctggagcaggttgtgctggacaaatcaactgag
ctggagcagcaccgcatgactagtcgcctggacctctccaccggccgtattcgtcccgaa
gaggaggagcacagcaacgacctggagaatgcactcatccgattggaggaggagcagcag
aggagtgccagcctcgcccaggtgaatgccatgctccgggagcagcttgaccaggccagc
tcagccaatcaggcactgagcgaggacatccgcaaactcactgctgattggacgaaggcc
cgagaggagctggagcagagggaggttgattggaggagagaggaggagtccttccacacc
tacttcagcagtgagcacagccgcctgctagccctgtggagacaagtggtgggcttccgt
cggcacatctgtgagctcaagagcgccacggagagggacctctcggaggtgcggaacgag
ctagccaaggcctcccgcagcgcccacgcttcctgtctcaacctgggtgccaacctgcga
gccagcgagagctcctccgccctggcgctggacaagcagagcgcccggcaggcacagctg
gaggagcagctgcgtgacaaggtgcgagacatgatccagatgcaggccagatgtgacacg
gagaaagcagagctcaacgccaggattacagagctgatggtggaggtggagaggatgaag
acccagggggaggagaaggagaaatccagcacctctctaactcagaggctggaagccctg
gagggcagtctctcccaggaacaggctgagcgagagcaggaggaggtggaggcgctgaga
gctgagattgaagcactgcagcaggctctccgtgacatcacacaggctgtgctggcggac
tctgacacgggggtccctgtgccccgcctcgagggagagcaggacctgatgggctctctg
ggcggggtctcagtcctgcgcagcccctcccctcgccggggtgcttctcctcgcagatca
gcctcccctcgacgcagcttctccaccagcctagctgaccccacgctgggggccgttcga
gctgccctcaccaacagacagatccacttacaggagctgcgagggcgctacgagggggcc
caggatctggtggcatctctgaggcggcagctggccgagagcgagacagagcgatgggct
ctcgagcagcgggcacagcagctgagcgaggagagagaggaggccgggcgagccaaggac
gccgcgcagagagatgctgacagacttcgctcctccactgaacacattggcagtgagaag
accagccttgggaaggcgctgcaggccctgcaggagagagtggagacgctgcagcaggaa
ggcgagaggctgcagctcgccaatgcagcgctgcagagagaaagggactgtgagagcgag
gagaaagagngggctctgaaagagagggagcgagccagggcagagactgagaaggggcag
aagcagctggagcaggccgaggctcgctgctcggccctcaggaaggagctggccctggtg
aaggaggctctgcagagacagacactggacaaggaggtgcaggagacggagaaggctggg
ctggctgaggctctgtgcagggcggagaccagtgttgctgagctgaccctggcctgcaac
agactcaaggcagaggagtcgaccctgcgcgactccctggctaagatgagctccctgaat
gaggggctggcccaggacaagatccagctcaacaagatcatcatccagctcgaggatgag
aagggctctctaatgggtcagaagcgggaggtggagcaggagaaggcctcgatccgagac
gagctcgtccgattggagcaggagaagctggacctggactccgcccgccatggcctggac
ctatcgctgcaggatgtggagcagagccaggaggtgctggaggagaggctgcgggcactg
caggggcagcgggctgagctacaagaacagctggcacaggtcacccgccagcgctcctcc
ctcctggaggacctgtcccaggctcagcgggaggtggagcgccagggggaggggctggtt
cgagcggcccgagagaaagaggagctgaccagagagaaggccagcctggtggtgcagctg
accgcgtccgagcgggagaaccacagcctggctgaagaggtggccgcattcaggtcggag
agggaggctctggagaccagcctcttcgaggtgcagcagcagctggttcagctggagtct
cggagggagcagctggaggcagaacaccaggccctgctgcgggccaaggaggcactgcat
gccgagttgaagcgagtgcgggcagaggctgaggtcggactggtcaagctggagcgagac
aaggagctgctggtgcagaagcagagccagaccgagcaggaagcccaggtcacactgcgg
tcagctctgaccgctcagcaagaggagactgaccgcctcacccacgagaaggaggcactg
aggctcacactggaggcacagcgggacgagattctgtacacgctgactcgcgagcgtgag
gagatagtgtctcgctacgaggctgagaaagaggagctgaacaaggagatcacagaactg
cagcaagagagggaccagagcctgctgatagcggagagtgagaagcaacaggccctgtca
ctgaaggagtcagagaagacgatcctctcggagaaactgaccagcgtccagcacgagctg
ggcaccaccagcatggagctggagagggtccgacgggaagcacagagcagacaggagcag
gagcgggtgagcgcaattgtttctggaggaggccccctctcctgcttcgggagcacagct
ggactcagagtcactggagaggcacaggtccaggacgtccgggagagccagcgcaaagac
atcctggatctgcgacgcagcctgggggaccaggacaaggagagagacaccctgcatgct
tccaacacagagctgagagaggctgtgaagagagcagagagcgagaggatcagtttgaag
aggctgaacgaggagaaggagcagaagctggctgtgctggaggagagccgagccgcatca
gagcgagaggccgcagagctgagggcggggcttcgcgaggtcgagaggtcacggctagag
gcccgcagagagctgcaggagctgcgccgccaggtgaagctcctggacagtgagaaggag
cagaggggccgggaggtggctgagctgcaggctcgggtctctctggatgagcagagggag
ggggacacacgcagggaatccttcggactcaagcagaggatcatggagactgaggctgtc
cgggacagcgcacgcaaggaggtttccagcctccagcgcaggatgacggagttggaggcg
gagtgccggctgcgcgagagggagctggcagcccagctggaggaagcgcgaggcaacgag
aagaagctgcaggacaacacgcgcaacctggagctgcgggctgagcaggcgcggggggag
ctgacggagctggggctggcgctgagtgaggcacaggggcgcatctccggcctggaggcg
gagctgacacgactcgacgggcacaagagagagctggagttcaaactgggcagcctgcac
tccaccctgagccgcaccctgggcatcggggggcggggccgcgggaacagccccgccctc
cgcggacgcagccactcccctcggcgctcactctcgccaccgaaaggattggatgagagc
aggaggagccccctggctcggatggagaccccagagagaggccccgcctccagacccgcc
tcccctgaccgcacggacacacccttcccagaactggaccctgagacagtccggagtgcg
ctcagagagttcctgcaggagctgagagacacgcagagagagcgggatgaggcccgtaca
cagtccgggactctcgctcggcagctcggggagatggaagcagatcgagacgggacccaa
cagaggctgcagcagctgcagaaatccctggccgagtgcgaggaagggaagcgtggtgcg
gacggccggctcagctctgctcagaccgctcttatgctgcaggaggaactgattcggcgc
agtgagcgcgagcgcaaggctctgctggacaaggtggccacgctggagaggagtgtgcag
ggagcagagagcgagcgccgtggcacgcaggataagataaacaagctgaaggctggcgag
gcgaggctggaggcagagaggaggaggctgaaggaggctctggaggcagcagagagcaga
ggcaccaagctggagctggccaggcgcgctctggaaggggagctgcagagaatgaagctg
gggctgggggacaaggagactgagatccaggcggcacaggaccgcatagacactctgcag
agacaggtgtcggacagcgagatgaaggccagcgccctgaagctggagctggatcggctg
cacctggccctggcgagggcggaggagagcgagggcacactgaaggagcgtctccagagc
cttgcgcagtgcgtggcagagagcaacaccagccaggccgccacccaggaccgcttgctc
accctgcagaagagcctgagcgccagcgagcaggagcgtcgcctcctgcaggagaggttg
gagagcgcgcggtcgtctgtcttggaaggaaagaagaatgccgggatgctgagtgagcgt
gtgcagactctacagagcgagctgggggagatggagctgaaaaggggagagctggagggg
caactgcagcaacaccaggagttgttgcgtcagcgcatggagtcggaagaggctgcgctg
agaagcctggagaagctgcagggagagcgggctctggcgcaggaaaggctgaggagtctg
cagagggccgtagcccagctggagagcgagaagagggaggcggagagggccgcagtcagg
ctggagaaagacaaggcagctctccgcaacacacttgacaaggttgaacgtgagaagttg
aagatggaggaggggagcatgcgtctgtcagcggagaaggggcgtctggaccgctcgctg
agctctgtggagcaggaactggtggactctcagagacagatccagctgctacaggcccag
cttggtgagatggagcagacgcaatcccagggcctcacggaggtgtctcggagactccag
caggatatgcagcaggagacggagcggctccggggagctcagctgcaggccgagaggact
ctggaggcgcgagagagagcacaccaacagcgtgtcaaggggctggaggagcaggtctcc
acgctgaaggagcagctgcagcaggaactccgaaggcgccagcctcacttctcccactcc
tccatcctgtctggaaactga
DBGET
integrated database retrieval system
