Acipenser ruthenus (sterlet): 117425604
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Entry
117425604 CDS
T07327
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5-like isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
arut03036
]
117425604
Chromosome and associated proteins [BR:
arut03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
117425604
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
PHD-1st_NSD
HDA2-3
ResIII
PHDvar_NSD
HTH_CHD1_Hrp3
PHD_2
DEAD
AAA_22
Motif
Other DBs
NCBI-GeneID:
117425604
NCBI-ProteinID:
XP_033898559
LinkDB
All DBs
Position
23:complement(531473..563711)
Genome browser
AA seq
1971 aa
AA seq
DB search
MPGSVSNEGERQDEMDFGDDMPDEEEEEEDEAEPAPVPLAALQGFFREDDPVKQQPKKKK
PCKPKQGKTTQLSKRKKEGGGSEEEAAPMCLKELEGDRSESEGSDYSPIKKKKKPREKKE
KKTRRKKKDEEEEEEEEEEDVGLKEPKSSTQLMEEWGLENVDYAFTEEDYHTLTNYKAFS
QFLRPLIAKKNPKIPMSKMMTVLGAKWREFSSNNPFKGLSAAAAAAAVAAAVETVAVSPP
IPQPAQPGAVRKAKTKEGKGPGARKKSKNTKEAKKKGKGKKMKIRLGGFGSKRKKGSSSE
EDEREESDFDEGSIHSTSVRSEASLQQKRKGRKGQQKKKKIEEGDGYETDHQDYCEVCQQ
GGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKEEEEEEEEMGEEEE
DDHLEFCRVCKDGGELLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRCMCPPLKGKVQRI
LHWIWGEPPLPPECPPGSGAPDPRAPRPQPPLKGHPERELYVKWAGLSYWHCSWVSELQL
ELYHTVMYRNYQRKNDMDEPPPYDYGSENEEMKSEKRKSKDPQYTLMEERFYRYGIKPEW
MIIHRVFNHSFDNNGDVHYLIKWRDLPYDQSTWEIDDFDIPEYNHFKQAYWNHRDLMLGE
DIRPPGIKKGRKMKDDKPPETPNVDPTIKFDKQPWYIDSTGGSLHPYQLEGLNWLRFSWA
QGTDTILADEMGLGKTVQTIVFLYSLYREGHSKGPYLVSAPLSTIINWEREFEMWAPDFY
VVTYTGDKDSRAVIRENEFSFEETPVKMGRKVFRMKKDTPIKFHVLLTSYELITIDQAIL
GSIEWACLVVDEAHRLKNNQSKFFRVLNGYKIYYKLLLTGTPLQNNLEELFHLLNFLTPE
RFNNLDGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQ
KKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLANGSYDG
NSLVRSSGKLTLLQTMLRKLKDGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITG
GLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHR
IGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKTGSMSKQELDDILKFG
TEELFKDDVEGARANGDNKDGEEGNVIHYDDNAISTLLDRSQDATDDTELQNMNEYLSSF
KVAQYVVREEDGEEEVQREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRVRKQ
VNYNDTSQEDQEWQDDLSDNQSEYSVGSEDEDEDFEERPEGGRRQSRRQLKSDRDKPLPP
LLARVGGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKSEKDFRAYVSL
FMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHINGKYSTPDLI
LDGAEMKRLTESISSDPNTPVPASPAATQPGTPVPTAEKTETPSGPAEEKETPELEVKKP
AGPEQVPSSSESSPSSEKPPPVEESKELVKEERGLEESENPELAQEDPATTGEACKEGER
PPEKSESNSVSSRGEDKDPQPGEEVKKEETPENQQNGEKEGKEEEEGRKDEKNAKMKFMF
NIADGGFTELHTLWQNEERAAVSSGKIYDIWHRRHDYWLLAGIVTHGYARWQDIQNDPRY
VILNEPFKSEVHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQDSSHPAIAL
NARFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTRLPSMLSRI
PPVAARLQMSERSILSRLTNRGNEPPPQQPFSQGSFSCSQMYGNSFGTSFRGPGAGGIVN
YSQMPLGPYVSASTNGPPSSHSEKKLSESLKDGAAPEHKGGKPSDVICIED
NT seq
5916 nt
NT seq
+upstream
nt +downstream
nt
atgccggggtcagtgagtaacgaaggcgaaaggcaagacgagatggattttggggacgat
atgccagacgaggaggaggaggaggaggatgaagcagagccggcaccagtgcccctcgct
gctctccagggattcttcagagaggacgaccccgtcaaacagcagcccaagaagaagaag
ccgtgcaaacccaagcagggaaaaaccacccagctgagcaagaggaagaaggaggggggc
ggtagtgaggaggaggcggcgcccatgtgtctgaaagagctggagggggacaggtcggag
agcgagggcagtgactactcccccatcaagaagaagaagaaacccagggagaagaaggag
aagaagaccaggcggaaaaagaaagacgaggaggaggaggaggaggaggaagaggaggat
gtggggctcaaggagcccaagtcctctactcagctgatggaggagtgggggctggagaac
gtggactatgccttcacagaggaggactaccacactttgacaaactacaaagctttcagc
cagttcctgaggcctctcattgccaagaagaaccccaagatccccatgtctaagatgatg
acggtcctgggtgcgaagtggcgtgagtttagcagcaacaacccgttcaagggcctgtct
gccgctgctgccgccgcggccgtggctgctgccgtggaaaccgtggctgtgtccccgccc
atccctcagcccgcgcagcctggagcagtcaggaaagccaagaccaaagaagggaaaggc
ccgggggcgagaaagaaaagtaaaaacacgaaggaagccaaaaagaaaggcaagggcaag
aagatgaaaatcagactgggcgggttcgggagcaagaggaaaaagggctcctcgagcgag
gaggacgagcgggaggagtctgatttcgacgagggcagcatccacagcacctcggtgcgc
tccgaggcctccctgcagcagaagaggaaggggcgcaagggccagcagaaaaaaaagaag
attgaagaaggggacggttacgagactgaccaccaggactactgcgaggtgtgccagcag
ggcggagagatcatcctgtgcgacacctgtcctcgagcctaccacctggtgtgcctggac
cccgagctggagaaggctcccgaggggaagtggagctgcccgcactgcgagaaggaaggg
atccagtgggagcccaaggaggaagaggaggaagaggaggagatgggggaggaggaagag
gacgaccacttggagttctgccgggtgtgcaaggacgggggggagctgctgtgctgcgac
acctgcccctcctcctaccacctccactgcctcaacccgcccctgccagagatacccaat
ggggagtggctgtgcccgcgatgcatgtgcccgcccctgaaagggaaggttcagcggatc
ctgcactggatatggggggagccccccctgcccccggagtgccccccaggctctggagct
ccggatcccagggccccccggccccagccgcccctgaaggggcaccctgagagggagctg
tatgtcaagtgggccgggctgtcctactggcactgctcgtgggtcagtgagctgcagctg
gagctgtaccacacggtgatgtatcgcaactaccagcgcaagaacgacatggacgagccc
cccccctacgactacggctcggagaacgaggagatgaagagtgagaagcgcaagagcaag
gacccccagtacaccctcatggaggagcgtttctatcgctacgggatcaaaccagagtgg
atgatcattcacagggtcttcaaccacagcttcgataacaatggagatgtccattacctg
atcaagtggagagacttgccttacgatcagtccacctgggagattgacgactttgacatt
ccagagtacaaccatttcaaacaagcctactggaatcacagggacctcatgctgggagag
gacatccgacccccagggatcaagaaggggaggaagatgaaggacgataagcccccggag
acgcccaatgtggacccgacaatcaagttcgacaagcagccgtggtacatcgactcgacg
gggggcagcctgcacccctaccagctggaggggctgaactggctgcgtttctcctgggcg
cagggcaccgacaccatcctggcagacgagatggggctgggcaagaccgtgcagaccatc
gtcttcctctactcgctctacagagagggacactccaaggggccgtacctggtcagcgcc
ccgctgtccaccatcatcaactgggagcgcgagttcgagatgtgggcgccggacttctac
gtggtcacctacaccggggacaaggacagccgtgcggtcatccgcgagaacgagttctcc
ttcgaagagacccccgtcaagatgggccgcaaggtctttcgcatgaagaaggacactccg
atcaagttccacgtgctgctcacctcctacgagctgatcaccatcgaccaggccatcctg
ggctccatcgagtgggcctgcctggtggtggacgaggctcaccggctcaagaacaaccag
tcaaagttctttcgagtgctgaacggctacaagatctactacaagctgctgctgactggg
acccccctgcagaataacctggaggagctcttccacctgctcaacttcctcacccccgag
aggttcaataacctggacggattcctggaggagttcgccgacatctcgaaggaggaccag
atcaagaagctgcacgacctgctggggccccacatgctgaggaggctgaaggccgacgtc
ttcaagaacatgccgtccaagacggagctgatcgtgcgggtggagctgagccccatgcag
aagaagtactacaagttcatcctgacgcggaacttcgaggctctgaactcgaaagggggc
gggaaccaggtgtctctcctcaacatcatgatggacctgaagaagtgctgcaaccacccc
tacctgttccccgtcgccgctgtggaggctccggtgctcgccaacggctcctacgatggg
aactcgctggtcaggtcctcggggaagctcacgctgctccagaccatgctgaggaagctg
aaggacggaggacaccgagtcctcatcttctcacagatgacgaagatgctggacctgctg
gaggacttcctggagcacgaggggtacaagtacgagaggatcgacggggggatcacgggg
gggctgcggcaggaagccatcgaccgcttcaacgctcccggcgctcagcagttctgcttc
ctgctctccacgcgggcaggggggctgggcatcaacctggcgaccgccgacacggtcatc
atctacgactcggactggaacccccacaacgacatccaggcgttcagccgagctcaccgg
atcgggcagaacaagaaggtgatgatctatcgcttcgtgacccgggcctcggtggaggag
cgcatcacgcaggtggccaagcgcaagatgatgctgacccacctggtggtgcggcctggc
ctgggctccaagaccggctccatgtccaagcaggaactcgatgacatcctcaagttcggc
acggaggagctgttcaaggacgatgtggagggagcccgggccaatggtgacaataaggac
ggagaggagggcaacgtgattcattatgatgacaacgccatctccacactgctggaccgc
agccaggacgccaccgacgacacagagctgcagaacatgaacgagtacctcagctccttt
aaggtggcgcagtacgtggtgcgggaggaggatggcgaggaggaggtgcagcgagagatt
atcaagcaggaggagaacgtggatcctgattactgggagaagctgctgaggcatcactac
gagcagcagcaggaagacctggccaggaacctgggcaaggggaagagagtgcgcaagcag
gtcaactataacgatacctcccaggaggaccaagagtggcaggatgatctttcagacaat
cagtccgagtactccgtgggatccgaagatgaggatgaagattttgaggagagaccggaa
ggaggacgcaggcagtctcgcagacagctcaagagtgaccgggacaaaccactccctccg
ctgctggccagagtcgggggcaacattgaggtcctggggttcaatgcccggcagcggaaa
gccttcctgaatgccatcatgcgctgggggatgccaccccaagatgccttcaactcccac
tggctggtgagagacctgcggggcaagagtgagaaggacttcagggcctacgtgtccctc
ttcatgcgacatctgtgtgagccgggggctgacggagccgagaccttcgcagacggggtc
ccgcgagaggggctgtcccgccagcacgtcctcacgcgcatcggggtcatgtctctcgtg
aggaagaaggtccaggagttcgagcacatcaacgggaagtacagcacccctgacctgatt
ctcgacggagccgagatgaagagactgacggagagcatctcatcggaccccaacacacct
gtacctgccagccccgccgccacccagcctggtacacctgtacccacagcagaaaagaca
gagactccctcgggaccagcagaggagaaggagaccccagagctggaggtgaagaaacca
gccgggcctgagcaggtccccagcagcagcgagtcttcccccagctcagagaagcccccc
ccagtggaggagagtaaggagctggtgaaggaggagcgagggttggaggagagtgagaat
cctgaactggcccaggaggaccctgctaccacaggggaggcttgtaaagagggagagaga
cccccggagaagtcagagagcaacagcgtctcgagcagaggagaggacaaggacccccag
ccaggagaggaggtaaagaaggaagagacgcctgaaaaccagcagaacggagagaaagaa
gggaaggaggaagaggaggggaggaaagacgagaagaacgccaagatgaagttcatgttc
aacatcgcggacggtggattcacagagctgcacacgctgtggcagaatgaggagcgagcg
gccgtgtcgtcggggaagatctacgatatctggcaccggagacacgactactggctgctc
gccggcatcgtcacgcacggctacgcgcgctggcaggacatccagaacgaccctcgctac
gtcatcctcaacgagcccttcaagtctgaggtgcacaagggcaactacctggagatgaag
aacaagttcctggcgcgccgcttcaagctgctggagcaggccctggtgattgaggagcag
ctccgacgcgctgcctacctcaacatgacgcaggactccagccaccccgccatcgctctg
aacgcccgcttcgcggaggtggagtgcctggctgagagccaccagcacctgtccaaggag
tccctggcagggaacaagcccgccaacgccgtcctacacaaggtgctgaaccagctggag
gagctgctgagcgatatgaaggcggatgtgacgaggctgccctctatgctgtcgcggatt
ccacccgtcgcggcgcgcctgcagatgtccgagcgcagcatcctgagccggctgaccaac
cgaggcaacgagccccctccccagcagcccttctctcaaggctctttcagctgctctcag
atgtacggcaacagctttgggacaagcttccgagggccaggagccggggggatcgtcaac
tacagccagatgcctttaggaccctacgtgtcggcctctaccaacgggcctccatcgagc
cactctgagaagaagctgagcgagtctctgaaggacggggccgcgccggagcacaaaggg
ggcaagcccagcgacgtgatctgcatcgaagactag
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integrated database retrieval system
