Acipenser ruthenus (sterlet): 117425755
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Entry
117425755 CDS
T07327
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR-like isoform X1
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04137
Mitophagy - animal
arut04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117425755
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117425755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117425755
Enzymes [BR:
arut01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
117425755
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117425755
Multi subunit type E3
ERAD complex
117425755
LMBR1L-GP78-UBAC2 complex
117425755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_SYVN1_N
G2BR
zf-RING_2
CUE
zf-C3HC4_2
zf-C3HC4
zf-RING_11
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-ANAPC11
zf-RING_5
zf-RING_16
Prok-RING_4
zf-C3HC4_4
SVIP
zf-RING_Vps41
zf_RING_Vps8
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
117425755
NCBI-ProteinID:
XP_033898887
LinkDB
All DBs
Position
22:complement(1861826..1869557)
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AA seq
626 aa
AA seq
DB search
MPLLFLERFPWPSLRTYTGLSAVLLVGSVLSAYRTVTQPTQEDLGAEDNSKIPITEQDYE
VHDFDSGVATNIFWYLVSDSFFVWVLVNTACCFLMLIAKIIQCMVFGPLRVSERQHLKDK
FWNFVFYKFIFIFGVLNVQTVEEVVMWCLWFAVLVFLHLMVQLCKDRFEYLSFSPTTPMS
SHVRVLSLLVSMLLSCCGLAVVCGVADYIQGMHTVAFMAAECLLVTVRTGHVIMRYTIHL
WDLNHEGTWESKGTYVYYTDFFMELTLLSLDLTHHIHMLLFGNIWLSMASLVIFMQLRYL
FHEVQRRIRRHKNYLRVVGNMEARFAIATPEELAANNDDCAICWDSMQAARKLPCGHLFH
NSCLRSWLEQDTSCPTCRMSLNINENSRAREDRQRENLGENIGPVPGAEARPHINHHNHF
FHFDGSRIASWLPSFSVEVMHTTNILGITQANNSQLNAMAHQIQEMFPQIPYHLVLQDLQ
LTRSVEITTDNILEGRIQVPFPTQPSERVPLELSPGTDEAAGASGSSENVPSEPEDFEAR
GSRFSKSAEERQRMLLQRKDELLQHARRRYLSKSPDQEEEEDEDEDEESILFSERSSSST
DSLTVRRRMLAAAAEKRMERQQDPLL
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgccgctacttttcttggaacggttcccttggcccagtttgcgaacgtacactggtctt
agtgcggtgttactggttggcagtgtactcagcgcctatcgcactgtgacccagccaacc
caggaggatctcggtgccgaagacaactctaaaattccgatcacagagcaagattatgaa
gtccacgacttcgatagcggggtggctacaaacatattctggtacctcgtttcagacagt
ttctttgtatgggttcttgtaaatacagcctgttgtttcctgatgttaattgctaaaatt
atccagtgcatggtgtttggccccttgcgtgtcagtgagaggcagcacctgaaggacaag
ttctggaacttcgtcttctacaagtttatatttatcttcggggtcctgaatgtccagact
gtggaggaggttgtgatgtggtgcctctggtttgcagtgttggttttcttgcacctcatg
gtccagctctgcaaagatcgcttcgaatatctgtctttctcacccaccaccccgatgagt
agtcatgtccgagtcctgtccctgctggtgtccatgctgctttcctgctgtgggctggct
gtagtgtgtggggtggctgactatatccagggaatgcacactgtcgccttcatggctgca
gagtgcctgctagtcacagtccgaacaggtcatgtcatcatgcgctacactatccacctg
tgggacctcaatcacgaaggcacctgggagagcaagggtacctatgtgtactacacagac
ttcttcatggagctgaccttgctctccttggacttgactcatcacatccacatgttgctc
tttggtaatatctggctgtccatggccagcctggttattttcatgcagctccggtacctc
ttccatgaagttcaacgcaggattcgacgtcacaaaaattaccttcgagtggttggaaac
atggaggcgaggtttgccatagccactcctgaagaactggctgccaacaacgatgactgt
gcaatctgctgggattcaatgcaagccgctcgcaaactgccatgtggacatcttttccac
aactcctgcctacgttcctggctggaacaggatacctcctgccctacgtgtcgcatgtcc
ctgaatatcaacgagaacagcagagccagggaagacagacagagggagaacttgggagaa
aacattgggccagtgccgggagccgaggccaggcctcacatcaaccaccacaaccacttc
tttcatttcgatggctcccggattgcaagctggctgcccagtttctcagtggaagtgatg
cacacaactaacatccttggtattacacaggctaacaactcccaactcaatgctatggca
caccaaatccaggaaatgtttccccaaatcccttaccacctagtgctccaggacctgcag
ttaacacgttcagtagaaattaccactgacaacattctggaggggagaatccaggtgcct
ttccccacacaaccaagtgagcgagtacccctggagctcagtccaggcaccgatgaggct
gctggagccagtggaagctccgagaatgtacctagtgagcccgaggactttgaagccagg
gggagtcgcttctccaagtccgctgaggagagacagagaatgcttctgcagaggaaggat
gagcttttacagcatgctcgcaggcgatatcttagtaaaagccctgatcaggaggaagag
gaggatgaagacgaggatgaagaaagtatcctcttctcagagcggagttcctctagtaca
gactctctcacagtgcggcgcaggatgctggcggctgctgcagaaaagagaatggagagg
cagcaggaccctctgctataa
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