KEGG   Acipenser ruthenus (sterlet): 117426148
Entry
117426148         CDS       T07327                                 
Name
(RefSeq) integrin alpha-6-like isoform X1
  KO
K06485  integrin alpha 6
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut04382  Cornified envelope formation
arut04510  Focal adhesion
arut04512  ECM-receptor interaction
arut04514  Cell adhesion molecule (CAM) interaction
arut04518  Integrin signaling
arut04810  Regulation of actin cytoskeleton
arut04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:arut00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    117426148
   04514 Cell adhesion molecule (CAM) interaction
    117426148
   04518 Integrin signaling
    117426148
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    117426148
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    117426148
   04810 Regulation of actin cytoskeleton
    117426148
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    117426148
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:arut04147]
    117426148
   04515 Cell adhesion molecules [BR:arut04515]
    117426148
   04090 CD molecules [BR:arut04090]
    117426148
Exosome [BR:arut04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117426148
  Exosomal proteins of breast milk
   117426148
Cell adhesion molecules [BR:arut04515]
 Integrins
  Integrin alpha subunits
   117426148
CD molecules [BR:arut04090]
 Proteins
  117426148
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 UstYa Integrin_alpha
Other DBs
NCBI-GeneID: 117426148
NCBI-ProteinID: XP_033899374
LinkDB
Position
12:complement(29851819..29884236)
AA seq 1085 aa
MAFSAKWLLLYLPLICFFKWTVISAFNLDTENVFRKNGEPGSLFGFSLAMHRQLNPTDQR
ILLVGAPKAKSLSNQKANITGGLYSCQLNIQQDDCKRVMFDNDINPSEENKENQWMGVTV
QSQGPGGKIVTCAHRYEKRQFVNTPQESRDIIGRCYVLSEDLTIQDEMDGGGWKFCDGRL
RGHERFGSCQQGLSATFTKDYHYIIFGAPGTYNWKGVVRVEQRNNTLVDLGILEDGPYEV
GDETRFDENLVPVPANSYLGFSLDSGTGITNKENITFVSGAPRANHSGAVVFLKKDGQFS
RSLSPEYILEGEGLASSFGYDVAVVDLNSDGWKDIVVGAPQFFVRDGEIGGAVYVYINNA
GKWDDVKPTRLNGTRDSMFGLAVENIGDINQDGFEDIAVGAPYDGGSGKVFIYHGSKSGV
NTKAAQILDGQDFGIKFFGYSLAGNMDLDGNLYPDIAVGSLSDALFVFRAKPVISIKKTI
ETSPARIDLETKNCLNGKSICMSAEACFKYTANPSDYNPRLTIAYTFEAESERKKINLPS
RVTFLNNMPGDPDYQHTGSLELRGQNKEKCVKAELKLQDNIKDKLRAIPITVAVEIKQAR
RKKRQAGKLLPLVPVLNSNDPSTARSEVNFLKEGCGSDNICQSKLKLEYKFCSRDDNDNF
TPLNVEDGLPVIALSQQKDIALEITVTNVAGDDAHEAKLIATFPDTLSYSAFRHSSDKQL
ICSANQNGSQADCELGNPFKRDSKVTFYVILSTTHVNLDTTDIEINLKLDTTSEQKDLAP
VTAKARVVIELLLSVSGVAKPSQVYFGGSVKGEAAMKMEDEVGSLVEYEFRIINLGKPLK
SLDGAYLDIQWPKEISNGKWLLYLMKIETKHLDIVTCTPTKEINPRRLLDSLSSSRKKRD
TGGQQTEEKLSLLSDKRKYLTLDCGKNVNCVNIRCPLKGLDSNAEVVLRSRLWNSTFLEE
YSKLNYLDIIVKASINIIATNVVLRNANTQVRVTVFPEKTVAQYTGVPWWIILVAILAGI
LMLALLVFLLWKCGFFKRSKYADSVPSYNAVRIRKEERQFKDGKSKDKYEKKQWKTTWNE
NESYS
NT seq 3258 nt   +upstreamnt  +downstreamnt
atggctttttctgcaaagtggcttttgctttatttaccactaatctgtttcttcaagtgg
acagttatttcagcttttaaccttgacacggaaaatgttttcaggaaaaacggagagccc
ggcagcttgttcggcttttcactcgccatgcacaggcaactaaatcccaccgatcaaaga
atattgcttgttggagcacctaaagcaaagtctttatccaatcaaaaggccaacataact
ggtggtttgtacagctgtcaacttaacatacaacaagatgattgtaagcgcgtcatgttt
gacaatgacattaacccgtcagaagagaacaaggaaaaccagtggatgggtgtgacagta
caaagtcagggaccaggtggaaagattgtgacctgtgcacatcggtacgagaagcgacag
tttgtaaatacaccacaggaatccagagacatcattggccgctgctatgttctgagtgaa
gacctgaccattcaggatgagatggacgggggtggctggaagttctgtgacggtcgattg
cgggggcatgagaggtttggctcttgtcagcagggtctatcagcaactttcacaaaggac
tatcattatattatttttggagcaccaggcacctacaactggaaaggggttgtgcgagta
gagcaaaggaacaatactcttgtggatttaggaatcttggaagatggtccctatgaagtt
ggggatgagacccgttttgatgaaaacctagtgcctgtgccagctaacagttacctagga
ttttcattggactctgggacaggcatcactaataaagaaaatataacgtttgtgtctggc
gcaccaagagccaatcacagtggcgcagtggtgtttctgaagaaagacgggcagttctcc
agaagtcttagtccagagtacattcttgaaggagagggacttgcttcttcttttggatat
gatgtggctgtagttgacctcaacagtgatggatggaaagatattgttgtcggagcgcct
cagttttttgtccgcgatggagagatcggtggagcagtttatgtctacatcaataacgct
gggaaatgggatgatgtcaaaccgacccgtctgaatggtaccagagactcaatgtttgga
ctagctgttgaaaacattggggacattaatcaggatggatttgaagatattgcagttggc
gcaccttatgatggtggttcaggaaaggtgttcatttaccacggatccaaaagtggagtt
aacaccaaagccgcacagattcttgatggccaggactttggtattaagttttttggatac
tcgttggctgggaatatggatcttgatgggaatttatatcctgatattgctgttggatca
ctctcggatgccctgtttgttttcagggcaaagccagttataagcatcaagaaaacaatt
gaaacatctcctgccagaatcgaccttgaaacaaaaaactgcctgaatggcaaaagtatt
tgtatgtctgctgaagcatgctttaagtacactgccaaccccagtgactacaaccctcga
ctaactattgcatacacatttgaagctgaatctgagaggaaaaaaattaacctgccatca
agagtaacgtttttaaataacatgccaggagacccagactatcagcatacaggatctctg
gagctgaggggacaaaataaggaaaaatgtgtcaaagctgaacttaagctgcaggataac
atcaaagacaaactgcgtgctattcccataacagttgctgttgaaatcaaacaggcaaga
cgcaagaaaagacaagctggcaaactcttacctcttgtcccagtcctaaactctaatgat
cccagcactgcacgatcagaggtaaactttctgaaagaaggttgtggctcagataatatc
tgtcagagcaaattgaagctagaatacaagttctgttccagagatgacaatgacaacttt
acaccactaaatgtggaggatggtttgccagtgatagctctgagtcaacagaaagacatt
gcccttgaaataactgtgaccaatgtggctggggatgatgcacacgaagccaaactcata
gcgacgttccccgacaccctatcctactctgctttccgccatagttcagacaagcagctc
atatgtagtgccaatcagaatgggtctcaggctgactgcgaactgggaaaccccttcaag
agagattctaaagttactttctacgtgatcttaagtacaactcatgttaatcttgatact
acagatattgaaatcaacctgaagcttgacacgacaagtgaacagaaggatttggctcca
gtcacagcgaaggctcgggtcgttattgaacttcttctctctgtgtcgggtgtggctaag
ccttcccaggtctactttggaggttctgtgaaaggagaggctgccatgaagatggaagat
gaagttggaagtttagttgaatatgaattcagaattattaacttgggaaaaccactgaaa
tcgttggatggtgcctatctagacattcagtggccaaaggaaatcagcaatggcaaatgg
ttactgtatttgatgaagatcgagaccaagcatctggatattgtaacctgcacccctaca
aaggaaataaacccaagaagactgctggattctctcagttcctcaaggaaaaagcgtgac
actggaggacagcagacagaagaaaaactgtccctcttatcagacaaaagaaaatacctc
accctggattgtgggaagaatgttaactgtgtgaacatcaggtgccccctaaagggatta
gacagcaatgcagaagtggtcttgcgatcaagactgtggaacagcacattcctggaggaa
tattcaaaactgaactaccttgatattattgttaaagcaagtatcaacattattgccact
aatgtggtccttagaaatgctaacactcaggttcgagtgacagtatttccagagaaaact
gtggcacagtacactggagttccctggtggatcatacttgttgcgattcttgctgggatc
ctgatgttggcactgctggtgtttttattgtggaagtgtggatttttcaaacggtccaaa
tatgccgacagtgttccaagttacaatgctgtgcgaattcgaaaagaggagcgccaattt
aaagatggaaaatcaaaagataaatatgagaaaaagcaatggaagacaacgtggaatgaa
aacgaaagctactcttga

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