Acipenser ruthenus (sterlet): 117426251
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Entry
117426251 CDS
T07327
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
117426251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117426251
Enzymes [BR:
arut01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117426251
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117426251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-B_box
SPRY
ANCHR-like_BBOX
zf-UBR
Motif
Other DBs
NCBI-GeneID:
117426251
NCBI-ProteinID:
XP_034763725
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All DBs
Position
28:complement(19568821..19570666)
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AA seq
451 aa
AA seq
DB search
MCLETPHPAVRTCLKCEISMCALHLKPHLEKKTFQSHALVEPTSDLSARKCSKHDEAVKY
YCFEDKSCICVSCTIEGEHKNHNVKSFKTAHSELRIELESKVKKITEKLKQAGGFLEKAR
QNETSVKAANAELKQNALDIFNNIIQLVNKYKEQMTEMIEAEQRLLVDSLEHSTGKLTEQ
HHLFKEIQQQADSVLTETDGFLFIQKHQEIQTKLTEALEKPFTEPDEKDLNKRKLFEDLE
NKFVEFQAEMGKAHQDLKVLFLSSELILDPNTAHPKLMLSDDLKTVRYTATKQAYTDHPE
RFDHWRQVLCFQGFSSGEHYWELDTGEGELACGDLLQEHGRKGSGTDAELGCNAASWTLK
FHDELSVCHNNVGTPLQVSTQPTRLAVHLHYDAGTLTFLNLTDKQTRLHTFRTRFTEPVY
PAFWIQSVTSTSWITVRSRFKDNVPKHRQET
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttggagaccccacacccagctgtcaggacgtgtctcaagtgcgagatctcaatg
tgtgctctccatttaaaaccgcatttggaaaaaaaaacatttcaaagccacgccttggtg
gagcccacgtcagacctcagtgcaaggaaatgctcaaagcatgacgaagctgtaaagtat
tactgttttgaggacaagtcctgcatctgtgtctcctgcaccattgaaggtgagcacaag
aatcacaatgtgaaaagcttcaaaacagcccattctgaactgaggatagaactggaatca
aaagtgaaaaaaattacagagaaacttaaacaagcaggaggcttcttagagaaggcgaga
cagaacgaaacctcagttaaagctgccaacgcagaactgaagcagaatgcattggacatt
tttaacaacatcattcaacttgtgaacaagtacaaagaacagatgacggaaatgattgaa
gcagaacagcgcctccttgtggacagtctggagcacagcaccggcaagctcactgaacag
catcatctcttcaaggagatccagcagcaagctgactctgtcttgactgaaactgatgga
ttcctgttcattcagaagcaccaggaaatccagacaaaactcacagaagcgctggagaaa
ccttttactgaacctgatgaaaaagacctgaacaagagaaaactctttgaagatctagaa
aataagtttgttgaatttcaagctgaaatgggaaaggcacatcaagatctgaaggtttta
tttctctcttcagagctcatactagaccccaatacagctcatcctaaactgatgctttct
gatgatctcaagactgtcagatacactgctacaaaacaagcttacactgaccaccccgag
aggtttgatcactggcgtcaggttctgtgtttccagggcttctcatctggagagcattac
tgggagctggacacaggggagggggaactggcatgtggggatctgctacaggagcatggt
cggaaaggcagtggtacagatgctgaattagggtgcaatgctgcatcctggactcttaaa
ttccatgatgagctctctgtttgccataacaatgtgggaacaccccttcaggtgtccacc
cagcccaccaggcttgcagtgcacctacattatgatgcagggactctgacgtttctcaac
ctaactgataaacagacccgtctgcacacattcagaacaagattcactgaaccagtttat
ccagcgttctggattcagtctgttacatccacatcttggataactgtaagaagtcgtttc
aaggataacgtccctaaacacagacaggaaacataa
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