Acipenser ruthenus (sterlet): 117426332
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Entry
117426332 CDS
T07327
Name
(RefSeq) hepatocyte nuclear factor 1-alpha-like
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arut03000
]
117426332
Transcription factors [BR:
arut03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
117426332
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
117426332
NCBI-ProteinID:
XP_034780973
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Position
12:complement(2488465..2497816)
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AA seq
612 aa
AA seq
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MGQSKRRLSKIVMVTRLTTLQQELLSALLGSGLSKQTLLEALGEMEACRPPQAGESPLEE
GEDEPRQGVVEDSSEEEGEEFTPPIFKELEALSPEEASRQRALVDRFLQQDSWHVAKIVK
SYMQQHNLPQREVVDSTGLNQSHLSQHLNKGTPMKSQKRAALYTWYVRKQGEINQQFTNA
SRGLLGEDPSEELTNKKVRRNRFKWGPASQQILFQAYERQKNPSKEEREALVEECNRAEC
IQRGVSPSQVHGLGSNLVTEVRVYNWFANRRKEEAFRHKLAMDSYGSQPPPPHSAASGSG
AGAHNSNPLNTTGLSASPAHGVRYSEQQANEGLTCSISHHGNSGMVTTQSILQSVSPPGL
EPSHSLLSNDCKLVSAAGGTLPPVSTLTALHGLLPHSAHTHPQTQGLIMASLPSVMTIGP
GESSFVIGLASTQSQNIPVLNSVGGGLTALQPVQFQQQLHHGHQQPIMQQFQSHMAQNSF
MATMAQFQSPHMYSHKSELPQYAPTSLFPQTMVITDTGNLSTLTSLTAVKQILTSDPDSQ
SNTPTHTPVSHSQDGTLHLLQGSPPVAVSSAGSLVMYQTQQGNESHPHLLHPPQGTIETF
IAAQMTSSSSSQ
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgggacagagcaagaggaggctgagtaagatcgtcatggtcacccgcttgaccaccttg
cagcaggagctgctgagcgctttgctggggtcggggttgagcaagcagaccctgctggag
gctctgggggagatggaagcctgcaggcccccccaggctggggagagccccctggaggag
ggggaggacgagccacggcagggggtggtggaggacagctcggaggaggagggggaggag
tttaccccccctatattcaaggagctggaggccctgagcccggaggaagcaagccgacag
agagccttggtggacaggttcttacagcaggactcatggcacgtggctaagatagtgaag
agctacatgcagcagcacaacctcccccagagagaggtagtggattccaccggactgaac
cagtcccacctctcccagcacctcaacaagggcactcccatgaagagccagaagagggca
gcactgtacacctggtacgtgcgcaagcagggagagatcaaccagcaattcaccaatgcc
agccggggactgctgggggaggaccccagcgaggagctgaccaataagaaggtgcggagg
aaccggttcaagtggggccccgcctcccagcagattctcttccaggcctacgagagacag
aagaacccgagcaaagaggagagggaggcgctggtggaagagtgcaacagggcggagtgt
atccagcgtggtgtgtccccctctcaggttcacgggctgggctctaacctggtcacggag
gtgcgggtgtataactggttcgctaaccggcgcaaagaggaggcgttccgtcacaaactg
gccatggactcgtacgggagccagcccccccctccccacagcgcagcctccgggagcggg
gctggagcacacaacagcaaccccctcaacactaccgggctctcagccagtcctgcacac
ggagtaaggtacagcgaacaacaggccaacgaggggctgacatgcagcatcagtcaccat
ggaaacagcggcatggtaaccacacagtctatactgcagtctgtgtctcctcccggccta
gagcccagccacagcctgctgagcaacgactgcaaactggtgtcagcagcaggagggacc
ctgcccccagtcagcaccctgactgcactgcacggcctgctcccccactccgctcacaca
cacccccagacccaggggcttatcatggcctcgctgcccagcgtcatgaccatcggcccg
ggggagtcctccttcgtcatcggtctcgcctccacgcagtctcagaatatccccgtcctc
aacagcgtggggggcgggctcacagctctccagccagtgcagttccagcagcagctgcac
cacggacaccagcagccaatcatgcagcagtttcagagtcacatggcccagaactccttc
atggccaccatggcgcagtttcagtccccgcacatgtacagccacaagtcagagctgccc
cagtatgcccccaccagcctcttccctcagaccatggtgatcacagacacagggaacctc
agcactctcaccagcctgaccgccgtcaaacagattctgacctcggatcccgacagccag
tcgaatactccgacccacacgcccgtgtcgcactcccaggacgggaccctccacctcctg
cagggcagcccacctgtggcagtgtcctctgcaggcagcctggtgatgtatcaaacccaa
cagggcaacgagagtcacccccacctcctgcaccccccccagggcaccatagagaccttc
atcgctgcgcagatgacctcctcctcctcctcacagtag
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