Acipenser ruthenus (sterlet): 117426375
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Entry
117426375 CDS
T07327
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 2 isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04145
Phagosome
arut04814
Motor proteins
arut05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117426375
09142 Cell motility
04814 Motor proteins
117426375
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117426375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
arut03036
]
117426375
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
arut04812
]
117426375
Chromosome and associated proteins [BR:
arut03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
117426375
Cytoskeleton proteins [BR:
arut04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
117426375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EML
WDR55
Dynein_IC2
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WD40_RFWD3
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
117426375
NCBI-ProteinID:
XP_034780954
LinkDB
All DBs
Position
12:complement(30048180..30077487)
Genome browser
AA seq
643 aa
AA seq
DB search
MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKEADQKKEAAPPQDDSDLEKKRREAE
ALLQSMGITPDAPVAQQLRVVTADTCLFHYLVPPPMSPSSKSVSTPSEAGSQDSGDGAVG
ARTLHWDTDPSVLQLHSDLGRGPLKLGMAKMTHVDFPPREVVSYTKETQTPVVTQQKEEE
DEEEETAPLKPMIEPEEEKAVQKEEEEAPPHELTEEEKLQVLHSEEFLSFFDHSTRIVER
ALSEHVDVFFDYSGRDLEEKEGEIQAGAKLSLNRQFIDERWSKHRVVTCLDWSLQYPELL
VASYNNNEDAPHEPDGVALVWNMKYKKTTPEYVFHCQSAVMSAAFAKFHPNLVVGGTYSG
QIVLWDNRSNKRTPVQRTPLSAAAHTHPVYCVNVVGTPNAHNLISISTDGKMCSWSLDML
SQPQDSMELVHKQSKAVAVTCMSFPLGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGH
QGPITGIHCHTAAGPVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNSDYVYDIMWSPT
HPALFACVDGVGRLDLWNLNNDTEVPTASITVEGNPALNRVRWAHSGREIAVGDSDGQIL
IYDVGEQISVPRNDEWTRFARTLAEINANRADAEEEAAARLSA
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgtctgataaaagcgaactgaaagcagagcttgagcgcaagaaacagcgcctggctcaa
atcagggaggagaagaaaagaaaagaggaggagcggaagaaaaaagaagctgatcagaag
aaggaagcggccccgccccaggatgactctgacctggagaagaagcggcgtgaggcagag
gctttgctccagagcatgggcattacacctgacgctccagttgcacaacaactccgagta
gtaacagcggatacctgtctgtttcactatttagtccctccacctatgtctccgtcctct
aagtctgtgagcacaccaagcgaggctgggagccaagactctggtgatggcgccgttgga
gctaggacacttcactgggacactgatccatcagttctacaacttcactctgatctggga
cgaggcccccttaaacttggaatggccaaaatgacacatgtggatttccccccacgtgaa
gttgtatcctacacaaaggaaacccagaccccagttgtgacgcagcagaaagaagaagaa
gacgaggaagaggagactgccccactgaaaccaatgatagaacccgaggaggagaaggca
gtgcaaaaggaggaggaagaagctcctcctcatgaactgaccgaagaggaaaagctgcag
gttctccattcagaggagtttctgtctttctttgatcacagcacccgcatcgtggagcgg
gccctctctgaacacgtggatgtgttctttgactacagcggcagggatttagaagagaag
gaaggagagatccaggctggagctaaactgtctttaaacagacagttcatagatgaacgt
tggtcaaagcatcgtgttgttacctgcctggattggtcacttcagtatcctgaactgctt
gttgcctcatacaacaacaacgaggatgccccccatgagccagatggcgtggctcttgtg
tggaacatgaaatacaaaaaaaccacaccagagtatgtctttcattgccagtcagcagtg
atgtcagctgcctttgcaaaatttcatccaaacctagttgttggtggcacatattctggc
cagatagttctgtgggataaccgcagcaataagaggactccagtgcagaggactccactc
tccgctgctgcacacacgcatccagtgtactgtgtgaacgtggtgggtactccgaatgct
cacaacctgatcagcatctcaaccgatggaaaaatgtgttcctggagtttggacatgctg
tctcagccacaggacagtatggaattggtccacaagcagtccaaggctgtagctgtcacc
tgcatgtccttccccctgggcgatgtcaacaactttgtggtgggaagtgaagagggctct
gtgtacactgcatgtcgtcatggaagcaaagctggaatcagtgagatgtttgaagggcac
cagggaccgattacaggtatccactgtcacacagcagcaggaccagtggatttctcccac
ctgtttgtcacctcatcctttgactggacagtgaaactgtggacaaccaagaataacaag
ccactttactcatttgaggataactcagactatgtttatgatatcatgtggtcccccacc
cacccagccttgtttgcttgtgttgatggagtaggccggcttgatctgtggaatctcaac
aatgacacagaggtacctacagcaagtataacagtggaaggaaatccagccttgaatcgt
gtgagatgggcacattctggcagagaaattgctgttggagactcagatgggcagatactc
atttatgatgttggagagcaaatctcagttccacgcaatgatgaatggacacgttttgcc
cgcacacttgcagaaatcaacgcgaacagagcggatgcagaagaggaagctgctgcgcgt
ttatcagcctga
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integrated database retrieval system
