Acipenser ruthenus (sterlet): 117426444
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Entry
117426444 CDS
T07327
Name
(RefSeq) tRNA pseudouridine synthase A-like
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
arut03016
]
117426444
Enzymes [BR:
arut01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
117426444
Transfer RNA biogenesis [BR:
arut03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
117426444
Prokaryotic type
117426444
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-GeneID:
117426444
NCBI-ProteinID:
XP_033899902
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Position
12:complement(5916619..5921517)
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AA seq
399 aa
AA seq
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MSCRMSEEQCLKALPAMGNESLKRGVEGKSEPAENGKGVKRFKANAEEPDKEEQKKLLKR
KVVLLMAYSGKGYHGMQRNVGSSQFKTIEDDLVHALVKSGCIPENHGTEMKKMSFQRCAR
TDKGVSAAGQVVSLKLWLIDDVMEKINGQLPAQIRILGLKRVTGGFNSKNKCDARTYSYM
LPTFAFAHKDNDKQDQGYRLNRETLERANVLFSCYKGTHNFHNFTSQKAARDPSAKRYIM
EMYLEEPFTLQGMEFAVIKVKGQSFMMHQIRKMIGLVIAVLKGYTADSIIERSWGEEKVD
IPKAPGLGLVLERVHFEKYNMRFGSDGLHEPLDWVEEEDRIAAFKEEHIYPTVIQTEIEE
KSMVNWLGTLPIHDFEATASGNQSAKAQDDEEDGNNDSD
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgcagaatgagtgaagagcagtgtttgaaagcgctccccgcgatggggaatgag
tccctgaagagaggcgtggaagggaagagtgaaccagcagagaacgggaaaggagtgaaa
agattcaaggcaaacgcagaggagcccgacaaggaggagcaaaagaaacttctcaaaagg
aaggtggttctacttatggcatattcagggaaaggctatcacggcatgcagagaaatgtg
ggctcatcccagttcaagacaatcgaagacgatttagttcatgcgctcgtcaagtcaggc
tgcattccagagaaccatggcactgaaatgaagaagatgtctttccaaagatgcgcaagg
actgataagggagtttctgcagctggtcaggttgtatctcttaaactttggctcattgat
gacgtaatggaaaagatcaatggacagctacctgctcaaatcagaattttagggctgaaa
agagtaactggtggctttaactccaagaacaagtgtgacgcgaggacctactcctacatg
ctgcccaccttcgccttcgcacacaaggacaacgacaagcaggaccaagggtaccggctc
aacagggagaccctggagagagccaatgtgctcttctcctgctacaaaggaacgcacaat
ttccacaacttcacctcccagaaggcggcccgggaccccagtgccaagcgctacatcatg
gagatgtacctggaggaacccttcaccctgcagggcatggagttcgccgtcatcaaggtg
aaaggtcagagcttcatgatgcaccagatcaggaagatgattggcctggtcatcgcggta
ttgaaaggctacacggccgattccatcatagagaggagctggggggaggagaaggtggat
attcccaaagcgccagggctgggcttggttctggagcgggtccatttcgaaaagtataac
atgcgcttcggaagcgacgggctccatgaacccctggactgggtggaggaggaggacagg
attgctgcttttaaagaagaacacatctaccccacagtcatccagactgaaattgaggag
aagtccatggtgaactggctaggcacactgccgatccatgacttcgaagccacagcatct
gggaatcagtctgctaaagcccaggacgatgaggaggatggcaataatgactctgattga
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