Acipenser ruthenus (sterlet): 117426510
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Entry
117426510 CDS
T07327
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger CCHC domain-containing protein 8-like
KO
K13128
zinc finger CCHC domain-containing protein 8
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arut03041
]
117426510
Spliceosome [BR:
arut03041
]
Complex C
Other components
Complex C specific factors
117426510
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GFIT
Motif
Pfam:
PSP
Herpes_BLRF2
KASH_CCD
RPN6_N
Knl1_RWD_C
zf-CCHC
CCDC113_CCDC96_CC
Motif
Other DBs
NCBI-GeneID:
117426510
NCBI-ProteinID:
XP_034781053
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Position
12:complement(5161317..5167483)
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AA seq
718 aa
AA seq
DB search
MAEVDFGCSELFQQLDEDKPAATHIRFEDARESEDESQGLRERLEECEETVVRLKEENQE
LKRKLNILTRPSGIEVEESRLDGPLLQILFTNNAISKQYHQEIEDCIFSLVQKYQEQSKN
DTEKASFDVKPQPSSFILEENHKVKTANTVKKIKDAFSVVGSVLYFTNFCLDKLGQPLLN
ENPQLTDGWEIPKYQQVFSQVISVDGQEVQIKDKRPKPCCFNCGSDLHQLKDCPRXVCFC
KPRDFARISEKRKELSQNSNQNSYQRYHADEERFGKYKAGTISAELQTALGIPENSLPPF
IYRMRQLGYPPGWLKEAEMENSGLALYDGKDDGGMDKDKNDQSRQVSYDVSKLIDFPGFN
VPAPKRMLDEWSSYNSIPMQHNHLKECFATYLSSNYPEPGSSSNKRAYESDSTPCNPKKR
RSDINETVMCLDMDVDSGSEMPHSSQGYDNFRFQPPLPPGSPAMSTLPPLPRGTPPGTPP
NFVPPPPLTPTPPPLPKGTPPPTPTNGSPAVQPHVVDDSTDADALTLEELEEQQRLIWAA
LENSETTTNSDSETLADTPLTGTSQTSSPSRNDTEAVTREAGELKLEAADTTVKDGDKES
EKPVPAVESISSVVADSTSNSTDSYEVPMEIKEGPVCIGASESPSSSTALEAGNRTDEEA
RDVSEIVGFVPHRSNFAAGITPFEDTGEYTNVAKTTGVYLKLRDLLKSSPRNQTKAKN
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggtggattttgggtgcagcgagcttttccagcaactcgatgaagacaaaccg
gcagcaactcacattcggttcgaagatgcccgggaaagtgaagacgaaagccaaggactg
cgagagaggctggaggaatgcgaggagacggtggtccgcttgaaagaggagaaccaggaa
ctgaagagaaaattgaacattttgaccagaccaagtggaattgaagtggaagaatccagg
cttgatggacctctactacagattttatttaccaacaatgcaatctccaaacaataccac
caagaaattgaagactgtattttcagtttagttcagaagtatcaggaacagtcaaaaaat
gacacagaaaaagcttcctttgatgtcaaacctcagccatcaagttttattctggaagag
aaccataaagtgaaaactgcaaatacagtcaagaaaatcaaagatgcttttagtgtagtg
ggaagtgttctttattttaccaatttttgtcttgacaaacttgggcagcctttgttgaat
gagaatccacaactgacagacggatgggaaatacccaaataccagcaagtcttcagtcag
gttatttccgtagatggacaggaggtgcaaataaaggataaaagacccaagccttgttgc
ttcaactgtggttcagacttgcaccagttaaaggactgtccaaggtaagtttgtttttgt
aagccgagggactttgcccgaatcagtgaaaaaaggaaggagttatctcaaaacagcaat
caaaacagttaccagcggtatcatgctgatgaagagagatttggaaaatacaaagcaggg
acaataagtgcagaactgcaaactgccctgggtattcctgaaaactccctccctccattc
atataccgcatgcgtcagctgggatatcctccagggtggctgaaggaagcagagatggag
aattctggactagctttgtatgatggaaaagatgatggaggaatggacaaggataaaaat
gaccagagcagacaagtctcttatgatgtctctaagctgatcgatttccctggattcaat
gttccagctccaaaacgaatgcttgatgaatggagttcatacaattcaatccctatgcag
cataatcatttgaaggaatgctttgcaacctacctgtctagtaactatccagagcctggt
tcaagttccaacaaaagagcttatgaatcagattcaaccccttgcaacccaaaaaagcga
agatcggatataaatgagacagtaatgtgtttggacatggacgttgattcaggctctgaa
atgcctcatagttcccagggctacgacaatttccgttttcagcccccactcccccccggg
tctccagcaatgagtaccctgccccctctgccccgcggaacacctcctggcacccctcct
aacttcgttcctcctccgcccctcacccccacccctcccccgcttcccaagggcactccg
ccccccacccccaccaacggctccccggcagtgcagccacacgtggtggacgactctaca
gatgcagacgccttgaccctggaggagctggaggagcagcagaggctgatctgggctgct
cttgagaactcggagaccactaccaacagcgactcggagactctcgcagacacccccctc
accggcacgtcgcaaacctcctcgccctcgaggaacgacaccgaggcagtcactcgggag
gcaggagaactgaaattggaggctgccgatactactgtcaaagatggggacaaggaatcg
gagaagccagtacctgcagttgaaagtatcagctctgtggttgctgacagcactagcaac
tccactgacagttacgaggtcccaatggaaataaaggaagggccagtgtgcataggagct
tcggagtccccgagcagcagcacagcacttgaggcaggcaataggactgatgaggaggcc
agagatgtctctgagatagtcgggtttgtccctcacaggagtaattttgctgctggaata
accccctttgaagacactggggaatacactaatgttgctaaaaccacaggagtctacctc
aaactaagagacttgctgaaaagttccccaagaaaccaaacgaaagcaaaaaattaa
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