KEGG   Acipenser ruthenus (sterlet): 117426562
Entry
117426562         CDS       T07327                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut03030  DNA replication
arut03410  Base excision repair
arut03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:arut00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    117426562
   03410 Base excision repair
    117426562
   03420 Nucleotide excision repair
    117426562
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:arut03032]
    117426562
   03400 DNA repair and recombination proteins [BR:arut03400]
    117426562
Enzymes [BR:arut01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     117426562
DNA replication proteins [BR:arut03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    117426562
DNA repair and recombination proteins [BR:arut03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      117426562
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf_DPOE_2 zf-DPOE DNA_pol_B DNA_pol_B_exo2 RNase_H_2 zf-RRPl_C4
Other DBs
NCBI-GeneID: 117426562
NCBI-ProteinID: XP_034781128
LinkDB
Position
12:complement(3847525..3869133)
AA seq 2303 aa
MVLQNSGRFKADRDRGQSGDQENQQDDASAMSALKRLERSQFTDEMDARFGFERMKDPGE
KTGWLINMHPTEILDDDKRMVSAVDYYFIQEDGSRFKVALPFKPYFYIATKKGCEREVIS
FLSKKYQGKIAKLEVMPKEDLDLPNHLVGLKRNYVKLSFNTVDDLIKVRREISPAVRKNR
EREKSNDAYTAMLSSALAGGSMTTLDDDGPSKKITDQLDNVVDLREYDVPYHVRLSIDLK
IHVAHWYNVRYRGSAYPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAESDQIMMMS
YMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFTVFNEPDEARLIQRWFEHIHETKPN
IFVTYNGDFFDWPFVETRAAQHGLDMYREIGFQKDSQGEYKASQAIHMDCFRWVKRDSYL
PVGSQNLKAAAKAKLSYDPVELDPEEMCRMATEQPQTLATYSVSDAVATYYLYMKYVHPF
IFALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIVFPNKQEQVFNKLTDDGHVLDSE
TYVGGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVEQTLRHAIEEEESIPMEQVTNLD
EVCEEIKKKLVSLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFN
KPGANCQRKMAWQWRGEYMPASRSEYHRIQQQLESEKFPPFFPNGRPRAFHELNREEQAR
HEKKRLGDYCRKAYKKVRTTRLEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKK
KLSVAQESGDAAEVKRCKNMEILYESLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCH
TGANIITQARELVEQIGRPLELDTDGIWCVLPNTFPENFVVKTTNEKKPKVTISYPGAML
NIMVKEGFTNHQYQELKDPASLTYETRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYA
VFNEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLEEVYASVAMVADYWLDVL
YSKGANMPDAELFELISENRSMSRRLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCR
YIIARKPEGSPVTERAIPLAIFQAEPSVRKHYLRKWLKTPALHEMDIRTILDWNYYIERL
GSAIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISELFSSEGKKQVVS
HQPAGSSSEGGGVGDVEDFGVKRGPLQPAIPISTKRKRVSLGEESQAESQELELTQSWRE
VLGPPPPSGNTREDRLVWLRYHKKKWELQARQRRERTKKRRLADGEVQPAGGGAIRGGPT
TGLGGFLRRTARSMLDLPWQIVQIAETSRPGLFKLWAVVGSDLHCMKLNIPRVFYVNQRV
PKQEEGALYKKVSRILPRSNVVYNLYQYSVPEEMYQEHINEINADLSAPDIEGVYETQVP
LLFRALVQLGCVCMVNKQLSREMAGREADTFDLEHLEMRSLAQFSYLEPGSVRHIYLYHH
GQGNKALFGLFIPSQRKASIFVLDTVRSNQMPSLTALYAAERAALLEKLGEDLLPPEKHT
FEVRAESDPKTVYRALQRALLNYKDERRGPTLIAVQSNWELRRLAAGMPVLEEFPVVPVH
VVDEISYSVLDWQRHGARRMLRHYLNLDSCLSQAFDMARYFHLPVGNLPEDVSTFGSDLF
LARHLRRHNHLLWLSPTARPDLGGKEADDSRLVMENEERSSVELNTQGCYSTVCVELDLQ
SLAVNTILQSQHVNDMEGGASMGVSFDVIQQASLEEMMSGNQGASSLASYDETALCSNTF
RILKSMVVGWVKEITQFHNVYADNQVIHFYRWLRSPSSLLYDPALHRTLHNMMKKVFLQL
VAEFRRLGSSVVYANFNRIILCTKKRRIEDAIAYVDYITNSIHSREIFHSLSISFSRCWE
FLLWMDLANYGGIKGKLPSSVHYGEEDKSSSARRQREEQEEGSEDEDEETAPPGGEEEEQ
LESEDVEELIESNWNIMQYLPQTASCQSYFLMIVSAYIAAVYHSMREELRRNAPGATPIK
RRGGSQVSQEAVGDSNALPGMITFSQEYVSSELTQNFFTITQKIQKKVTGSRNTTETSEM
FPVLPGSHLPLNNPALEFIKNVCKVLSLDSNITNQVNKLKRDLLRLVDVGEFSEHAQFKD
PCQSYILPEVICRHCNFCRDLDLCKDPSVVQDGVVTPQWFCSNCQAQYETDAIETALVEA
LQKKLMTYTLQDLICMKCKGVKQANMPIYCSCAGDFSLSLSIKGFSEQIGVFRNIAAHYS
MPFLRENIDWMLQMNPELGKEKA
NT seq 6912 nt   +upstreamnt  +downstreamnt
atggttctgcaaaacagcggaagattcaaagcggaccgggacaggggccagagcggagac
caggaaaaccagcaggatgatgcctcggcgatgtccgctcttaagcggctggagcgcagt
cagttcacagacgagatggacgctcgcttcggcttcgagaggatgaaagatccaggagag
aagacaggctggctcatcaacatgcacccgacggagatcctagacgatgacaaacgcatg
gtcagtgccgtcgattattacttcattcaggaggacggcagcaggtttaaggttgcactt
ccctttaaaccctatttctacatagcaactaagaagggctgcgagagagaggtgatctcc
ttcctttctaagaagtaccaggggaaaatcgccaagctggaggtcatgcccaaggaggac
ctggatctgcccaatcacctggtgggtctgaagaggaactacgtcaagctgtccttcaac
accgtcgacgacctcatcaaagtgaggcgcgagatctctccagccgtgaggaagaaccgg
gagcgcgagaaatccaacgatgcctacaccgccatgctgtccagtgcgctggccgggggc
agcatgactaccctggacgatgatggcccctccaaaaagatcaccgaccagctggacaac
gttgtggacctgcgggagtacgacgtgccctaccacgtgcgtctgtccatcgacctgaag
atccacgtggctcactggtataacgtgcgttaccgtggcagcgcctaccccccagagatt
gtgcgcagggatgacttggtggagcggccggacccggtcgtgttggcgttcgatattgag
accaccaagctgcccttgaagttccccgacgcggagagcgaccagatcatgatgatgtca
tacatgattgatggacagggctacctgatcacaaaccgtgagattgtgtcggaggatatt
gaggattttgagttcacccccaaaccagagtacgagggccccttcactgtgtttaatgag
cctgatgaggcccgtttgattcagagatggtttgaacacatccacgagaccaagcccaac
atcttcgtcacctacaatggagacttcttcgactggccctttgtggagacgcgggcagca
cagcacggccttgacatgtaccgcgagatcggctttcagaaggacagccagggagagtac
aaggccagccaagccattcacatggactgcttcaggtgggtgaagcgagacagctatctg
ccggtgggcagtcaaaacctgaaggcggcagcgaaggccaagctgagctacgaccccgtg
gagctggacccggaggaaatgtgccgcatggccacggagcagccgcagacattggcgacc
tattcggtgtcagatgctgttgccacctactacctgtacatgaagtacgtgcaccccttc
atcttcgcgctgtgcaccatcattcctatggagcctgatgaggtcctgcggaagggctct
ggcaccctgtgtgaggctctcctgatggtccaggccttccacgccaacatcgtcttcccc
aacaagcaggagcaggtcttcaacaagctgacggacgacggccacgtgctggactctgag
acctacgtggggggccacgtggaggcgctggagtccggggtcttccgcagcgacatcccc
tgccgcttcaaaatgaacccggccgccttcgacttcttgctgcagcgagtggagcagacc
ctgcggcacgccatcgaggaggaggagagcatccccatggagcaggtcaccaacctggac
gaggtgtgcgaggagattaagaagaagctggtctctctgaaggaggtgcccaacaggatc
gagtgtcccctcatttaccatctcgacgtgggggccatgtaccccaatatcatcctcacc
aaccggctgcagccttctgccatggtggacgaggccacttgtgccgcctgtgacttcaac
aaacctggagccaactgccagaggaagatggcatggcaatggagaggagagtacatgccc
gcgtcacgcagtgagtaccaccgcattcagcagcagctggagtccgagaagttcccgccc
ttcttcccgaacgggcgcccccgggccttccacgagctgaaccgcgaggagcaggcgagg
cacgagaagaagcggctgggagattactgccgcaaggcctacaagaaggtgcgcaccacg
cggctggaggagcgcgtcaccaccatctgccagcgggagaactccttctacgtggacacc
gtgcgcgctttcagagaccgccgctacgagttcaaggggctgcacaaggtgtggaagaag
aagctgtctgtggcccaggagagcggggacgctgctgaggtgaagcgctgcaagaacatg
gagatcctctacgagtccctgcagctcgctcacaagtgcatcctcaactccttctacggc
tacgtcatgagaaagggggcacgctggtactccatggagatggctgggattgtgtgccac
actggagccaacatcatcacacaggctagggagctggtggagcagattgggagacccctg
gagctggatacagacgggatctggtgcgtcctccccaacaccttccctgagaatttcgtt
gtcaagacgaccaacgagaagaagcccaaggtgacgatctcctaccctggagccatgctg
aacatcatggtcaaggagggcttcaccaatcaccagtaccaggaactgaaggacccggcc
tcgctcacttacgagactcgctcagagaacagcatcttctttgaggtggacgggccttac
ctagccatgatcctacctgcctccaaggaggagggcaagaaactgaagaagaggtacgct
gtgttcaacgaggacggctctctggctgagctcaagggcttcgaggtgaagcgcaggggg
gagctgcagcttatcaagatcttccagtcctccgtgttcgaggccttcctcaagggcacc
acgctggaggaggtctacgcctccgtggccatggtggcagattactggctggacgtgctc
tacagcaagggtgccaacatgccggacgcggagctgttcgagctgatctcagagaaccgc
tccatgtcgcgccggctggaggactacggagagcagaagtccacgtccatcagcacggcc
aagcggctggcggagttcctgggtgaccagatggtgaaggacgccgggctgagctgccgc
tacatcatcgccaggaaaccggagggctcgcccgtcacagagagagccattccgctggcc
atcttccaggcagagcccagcgtccgcaagcactatctgcgcaagtggctgaagacccct
gccttgcatgaaatggatatccgcactatcctcgactggaactattacattgagaggctg
ggcagtgccatccagaaaatcatcaccatccctgccgccctgcagcaggtaaagaacccc
gttccgagggtgaggcaccccgactggctgcacaagaagcttctggagaagaatgacatc
tacaagcagaagaagatcagcgagctgttcagcagtgagggaaagaaacaggtggtgtct
caccagccggcaggcagcagcagtgaaggcggaggggtgggtgacgtggaagactttggg
gtgaagcggggccccctgcagcccgccatccccatcagcaccaagcggaagcgcgtctct
ctgggggaggagagccaggcggagtcccaggagctggagctcacgcagtcctggagggag
gtcctggggccacccccgcccagcgggaacacacgggaggacaggctggtctggcttcgt
tatcacaagaagaagtgggagctgcaggctcggcagcggcgggagcgcaccaagaagcgc
aggctggcggacggggaggtgcagcccgcggggggaggagccatccggggcggcccgacc
acggggctgggcggcttcctcaggagaaccgcccgcagcatgctggacctgccctggcag
atcgtgcagatagcagagacgagtcggccgggtcttttcaagctctgggcggtggtcggc
tctgacctgcactgcatgaagctcaatatcccgagagtcttctacgtgaaccagcgagtg
cccaagcaagaggagggggccttgtacaagaaggtgagccggatcctgccgcgctccaac
gtggtgtataacctgtaccagtactctgtgcccgaggagatgtaccaggagcacatcaac
gagatcaacgcagacctctccgcgcccgacatcgagggggtctatgagacacaggttccc
ctgctgttcagagccctggtccaactgggctgcgtctgcatggtcaacaagcagctgtcc
cgagagatggccggccgggaggctgacacctttgacctagagcaccttgaaatgaggtca
ctggcccagttcagctacctggagccaggcagtgtgcgtcacatctacctgtaccaccac
ggccagggcaacaaggctctgtttggactcttcattccgtcccagcgcaaggccagcatc
ttcgtcttggacacggtccgcagtaaccagatgcccagcctgacggccctgtacgctgcg
gagcgtgccgccctgctggagaagctgggggaggacctgctgccccccgagaaacacacc
ttcgaggtgcgggctgagagcgaccccaagaccgtctaccgggctctgcagagggcactg
ctcaactacaaggacgagcgccgcgggcccaccctcatcgcggtgcagtccaactgggag
ctgcggcggctggcggccgggatgccagtgctggaggagttccccgtggtgccggtgcac
gtggtggacgagatcagctacagcgtgctggactggcagcgccacggggcacggaggatg
ctgcggcactacctcaacctggacagctgcctctcgcaggcctttgatatggccaggtac
tttcacctgccggtgggtaacctgcccgaggatgtgtccaccttcgggtcggacctgttc
ctggcgcggcacctccgccgccacaaccacctgctgtggctctcccccaccgcgaggcct
gacctggggggcaaggaggcagacgacagtcgtctggtgatggagaacgaggagaggagc
tctgtggagctcaacactcaaggctgctactccacagtgtgcgtggagctggacctgcag
agcctggctgtcaacaccatcctgcagtctcaacacgtcaacgacatggagggcggagcc
agcatgggggtgagcttcgacgtcatccagcaggcctccctcgaggagatgatgtcaggc
aaccagggcgcaagctcgctggccagctacgacgagactgccctctgctccaacaccttc
aggattctgaagagcatggtggtgggctgggtgaaggagatcactcagtttcacaacgtc
tacgctgataatcaggtgatccacttctaccgctggctacgctcccccagctcgctgctg
tacgacccggcattgcaccgcaccctgcacaacatgatgaagaaggtcttcctgcagctg
gtagctgaattcaggcgcctgggttcctctgtggtttatgccaacttcaaccgcatcatc
ctatgcaccaagaaacgaaggattgaggacgccatcgcgtacgtggactacatcaccaac
agcattcattcccgggagattttccactctctctccatctccttctctcgctgttgggag
ttcctgctctggatggatctggcaaactacggggggatcaaaggcaaactgccgtccagc
gtgcactacggagaggaggacaagagcagctcagcacgccgacagcgagaggagcaggag
gagggcagtgaggatgaagatgaagagacagcgccgcctggtggtgaggaggaggagcag
ctggagagcgaggatgtggaggagctcatcgagagtaactggaacatcatgcagtacctg
cctcagaccgcgtcctgccagagctacttcctaatgatcgtctccgcctatatcgcagct
gtctatcacagcatgagggaggagctacgccgcaatgctccgggagccacgcccatcaag
cggagggggggcagccaggtttcccaggaggccgtgggtgacagcaacgctctgcctggg
atgatcacattctcccaggagtatgtctccagcgagctcacccagaacttcttcaccatc
acccagaagatccagaagaaggtgacgggttccaggaacaccacagagacctcggaaatg
ttcccagtgctgccgggatcccacctgcccctcaacaacccagcgctggagttcatcaaa
aacgtctgcaaggtgctgtctttagactccaacatcaccaatcaggtgaacaagctgaag
agggacctgctgcggctggtggacgtgggtgagttctctgagcacgcccagttcaaggac
ccctgccagtcctacatcctacccgaagtcatctgccggcactgcaacttctgccgagat
ctggacttgtgcaaggacccctcggtggtgcaggatggtgttgtgactccgcagtggttc
tgctctaactgccaggcgcagtacgagacggacgccattgagactgccctggtggaggct
ctgcagaagaagctcatgacctacaccctgcaggacctgatctgcatgaagtgtaaaggg
gtcaagcaggccaacatgcccatctactgcagctgtgccggagacttcagcctcagcctg
tccattaagggattttccgagcagatcggcgtcttccggaacatcgctgctcactacagc
atgcccttcttgcgggagaacatcgactggatgctgcagatgaaccctgagctgggcaag
gagaaggcgtga

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