Acipenser ruthenus (sterlet): 117426810
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Entry
117426810 CDS
T07327
Name
(RefSeq) obscurin-like isoform X1
KO
K19574
obscurin-like protein 1
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
arut03036
]
117426810
Chromosome and associated proteins [BR:
arut03036
]
Eukaryotic type
Centrosome formation proteins
3M complex
117426810
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
V-set
Ig_MYOM1
VEGFR1-3_N_Ig-like
Ig_6
Ig_5
C2-set_2
Ig_4
SECTM1_Ig
Izumo-Ig
VEGFR-1-like_Ig-like
Ig_C17orf99
fn3
Motif
Other DBs
NCBI-GeneID:
117426810
NCBI-ProteinID:
XP_033900759
LinkDB
All DBs
Position
12:complement(22452889..22515099)
Genome browser
AA seq
2525 aa
AA seq
DB search
MDVFGGAPRFLAYPRPLVVQGGTDAVLKCQIAGDPRPAVIWERANKQLHPDGRYRLFEDG
NIYNLIISRVGAEDSGQYICKAKNSIGETYAAATLKVEGEAPERALREENKPHFLIKPLS
VRVGRSEDAVFSCKLWGKPRPEIIWEKDGKKLNDIFESAHFSIGHQDGGWFQLKIFQTRA
PDAGVYTCRARNEHGEALAGAVLLVDAGPGHEEEAATLNGYVNGNWKHHQGKRGSMLSGT
HNIEEPAPNSAKVKMFTVSEGKHAKFRCYVTGKPKPEIVWRKDGVVIMSGRRYLLYEDRE
GYFTLKVLYCKQQDNGLYVCAASNTAGQTLSAVHLNVKEPAVRFKQPLNDVEVRERELAV
LECEVSVDSVPTTWYLEDRRLQPGAKYGIEQCGTVRRLTIRDIGADDDGIYLCEMADGGR
SIAEVSVRGTIVRKLPRKVDLLEGENAAFCVEVEDEEMDIHWFKDGLELRETHQTILKSF
GKTHILVFVNATPQDSGIVTFVVGRSKTSSQLRVKAVRQSPPSCPVGVQMNTERSNSALL
SWVPAHDSRKNPPTGYVLERQEVGSQEWLQCLTTDLASAVEILGDSVPSEADYRFRICSV
NKYGRSGHVEFSSVVHLVPVARIKTPLQDVLVSEGKDAEFSIELSALVIGTWFLNGSQIQ
EDERYTIHRSRTEHSLRLKATNPSDNRSEITFIAYGVRDSAMLYVQPPPVKFESLPEMDR
NKKTEAGSPIVLYCELSDANAQVHWYKDGVELHTQEGIHVQSEGTMRRLVIQSADFSHSG
EYRCDAIDDVLKFNVEVEAPRVKFAALSLMDRHKNIESGSPIELCCELSNPNTQVSWYKD
GMALHPQDGFDIQSEGTKRQLVIQSAEASHSGVYSCDAVDDVIKFNVDVEVAPPVKFAAM
SEMDRHKSIESGSPIELCCELSNPNTRVRWYKDGTELHPQEGFDIQSVGSTRRLVIQSAE
VSHSGVYCCDAVDDVIKFNVDVEAPPVKFAALSETDRNKSIESGSPIELFCELSNPNTRV
RWYKDGTELHPQEGFDIQSEGSTRRLVIQSAEVSHSGVYCCDAVDDVIKFNVDIEAPPVK
FNPLPEADLHKSIVESSPVVLYCQVSRPDAPVRWYKDGIEIQPNDGITVQSDKTMRRLVI
QSSKLSDSGVYTCHAVDDAVVFNVNIQEPPVTVVHPRGDVHLEHQVSEQIVLSCELSRSN
AAVHWYKDGQELLESDDVILESEGPHRRLIILQGRPENSGEYVCDTADDSIFYQVTVTEP
AVQIVSPSQSPMVLEFLTEECVVLSCEVSRPNADVCWYQDGLELEETEDLILETEGVHRR
LIIPKAAVQDSAEYICDAVDDSVTFMVKITEPPVKFVRPHKAPGAVKVFVGDPVVLECEV
SHSNAKVSWRKEGQEMEDSKEVTIEEVGVLRRLTIHSPKLEDSGNYFCDAKDETMDFRVK
VTEAPVQIKRKGELKTQQQVMVSDDVVLECELSRANGTIKWYKDGEKITDNERVCLEEEG
AFRSLVILNAETSDSGEYFCDACDDSVVFHVCVKEPPVTIIGNSDSPEHHSLIAGDDLVL
SCELSRSNATVEWYCNGKPLSSEDSRICIETIGSVRQLVISGLRPSDSAEYICNAGDDKM
VTTVTVKEPPVQILNKEDAKESIDVVENDSVTLCARVSKEDAAVQWLKNWKDISGERYCA
SSDGKSRLFSIRKVQLSDSGVYTCDAFSDEIHFTLQVKAAPIKFERKQEKPEDVFATETE
NTIMSAVVSSEKSEVKWLRHQSQIFDSEKYETRVEGRVHSLIVKNTSKEDCGMYTCISQD
DEMVFVVSVKELKLNFVRSLEEVYAYKDDTIILRCELCKPKGDVQWLKDGQQILPSRHLA
MKAEGRERSLTIHRATGNDTGEYICESKDDKTCARVTVEMPRVVEVIAELHNVTVLEGED
ATLKCVVSPEDAKLVWHRNGNVVVPDDKFVVSRKGLCHTLTIRDCQLTDSSKVTAEAEGV
VSKANLQVQEAQVLFTKKMEAVVAEEHGEATLEVEVSLESGEVQWMRQGVVIQPSPKFTL
SAKGRKRSLTVHNLTFSDRGTFRCETLHDRTQGKLNVEPRKISIKKGLTDTETLERETAS
FEVEVSHVDVQGVWQKDGIRIKPNNNWRVSTHGRVHALTLYNLTLEDSGTVTFSAESVRT
SARLTVKEPPVIFLRALEDLRIPESSGASLECELSRQNADVKWLKNGEELKPGKNYRIYS
MGRKRFLQITKCGIADSGTYTCDAVDSKVTAVLDVYERDVEIVQGLQDAIIQEDKNAVFM
CEVSVEDVKGEWLRNGEKIRPTSNVRIRQEGNKHFLLICNVKAEDSGKITFVAKQAESTA
NLEVEELPVQIVKPLRDKTALEKHRVILECTVSNPRCSVRWYQGETLILPSDHYEICSEG
CYRKLVIQHVTAMDEGTYSVQVGEHESSARLLVEEQAILVVRQLEDVEVKAPEEARFECE
ISVPIVKPPQWSLNGQPLQNGNGVRMESAGTVHRLILKETSSEMVGIVKFTTGKARSSAR
LSIKC
NT seq
7578 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgtttggtggtgccccacgcttcctggcataccctcgccccctggtggtgcag
ggtggcactgacgccgtgctgaagtgtcagatcgctggggacccccggccagccgtcatc
tgggagcgagctaataagcagctccaccctgatggacgttaccgcctctttgaagatggc
aatatctacaaccttatcatttccagagtgggggcggaggacagtgggcagtatatctgc
aaggccaaaaacagcattggggagacctacgccgcagctactcttaaggtcgagggagag
gcaccagagagggcgctacgagaggagaacaagcctcacttcctcatcaagcctctctca
gttcgagtcggccgaagtgaagatgccgtcttctcctgcaagctgtggggcaagccccgg
ccggagatcatctgggagaaggacggcaagaaactgaatgacattttcgaaagtgctcac
tttagcatcggccaccaggacgggggctggttccagctgaagatctttcagacccgggcc
cccgatgcaggagtctacacctgccgggccaggaatgagcatggtgaagcgctggctgga
gcggttttgttggtagatgccgggccaggacatgaggaggaggcagcgacccttaatggg
tacgtcaatggtaactggaagcaccatcagggcaagcgtggttccatgcttagtggcact
cataatatcgaggagcctgcgcccaactcggctaaagtgaaaatgttcacagtttcggaa
ggcaagcatgccaagttccgttgctacgtgacagggaaacccaaaccagagattgtgtgg
aggaaggatggcgttgtgataatgtctgggaggcggtatctgttgtatgaagatcgggaa
ggctacttcacgctgaaagtgctctactgtaagcagcaagacaatgggctttatgtctgt
gctgcctccaacacggcaggacagacccttagtgctgtgcatctcaacgtcaaagagccg
gcagtgcggttcaagcagcccctgaatgatgtggaggtacgtgagcgagagctggctgtg
ctggagtgtgaggtctctgtggactccgttcctaccacctggtatctggaagatcggcga
ctgcagccaggagcaaagtatggcattgagcagtgtggtacagtgcgtcgactcaccatc
cgagacattggggcagatgatgatggaatctatctctgtgagatggctgatggagggagg
agtattgctgaggtgtctgtcagaggtacaattgtgcgcaagcttccccggaaggtggat
ttattagaaggggagaatgctgctttctgcgtggaggttgaggatgaagagatggacatt
cattggttcaaagatggactagagcttcgagagacgcaccaaactatcctcaaatccttt
ggcaaaacccacatccttgtctttgtcaatgcaacaccccaagactctgggattgtgact
tttgtagtgggcagatccaagacttcttcacagctccgtgtcaaggcggtccggcagtct
ccacccagttgcccggtgggtgtgcagatgaacacggagcgttcaaactcagcgttgctg
tcctgggtcccggcacacgattcacgcaagaacccccccacagggtacgtgctggagagg
caggaggtgggctcccaggagtggctgcagtgcctgaccacagacctagccagtgcggtg
gagatcctgggcgacagcgtgccctctgaggcagactaccggttccgcatctgcagcgtc
aacaagtacggcaggagcggccacgtggagttctcatcagtcgtccacctagtgccagtg
gctcggataaaaacgcctctacaggatgtcctggtgtctgagggcaaagatgctgagttt
tccattgagctgtctgccctggtgatcgggacctggtttttaaatggttcccaaatccag
gaggatgagaggtacaccatacaccgctcccgtacagagcattccctgcgtctcaaagct
acgaatccgtctgataacaggtctgaaatcaccttcattgcctacggagtgagggactcg
gcaatgctctatgtgcaacctccaccggtgaagtttgagtctctaccagagatggaccgc
aacaaaaaaactgaagcaggcagccctattgtcctgtactgtgaactgtcagatgccaac
gcgcaggtccattggtacaaggatggggtggagttacacactcaagaaggaattcatgtc
caatcagaaggcaccatgaggaggctggtcatccaatccgcagatttctctcattctggg
gagtacaggtgtgacgccattgatgatgtcctgaaatttaacgtggaggttgaagctcca
cgggtgaagtttgcagcactttcgttgatggaccgccacaaaaacattgaatcgggcagc
cccattgagctgtgctgtgaactgtcaaaccccaatactcaggtcagctggtacaaggat
ggaatggcgcttcacccacaggatgggtttgacatccaatcagagggcaccaagaggcag
ctggtcatccaatcagcagaggcctcccactctggggtgtatagctgtgacgccgttgat
gatgtcatcaaatttaacgtggatgttgaagtagctccacctgtgaagtttgcagccatg
tcagagatggaccgtcacaaaagcattgaatcgggcagccccattgagctgtgctgtgaa
ctgtctaatcccaacactcgggtacgctggtacaaggatggaacagagctccacccacag
gaaggatttgacatccaatcagtgggaagcacaaggaggctggtcatccaatcagcagag
gtctcccactcaggggtgtactgttgtgacgctgttgatgatgtcatcaaattcaatgtg
gatgttgaagctccaccggtgaagtttgcagccctgtcagagactgaccgcaacaaaagc
attgaatcaggcagccccattgagctgttctgtgaactgtctaatcccaacactcgggta
cgctggtacaaggatggaacggagctccacccacaggaaggctttgacatccaatcagag
ggaagcacaaggaggctggtcatccaatcagcagaggtctcccactcaggggtgtactgt
tgtgatgctgttgatgatgtcatcaagtttaacgtggacattgaagctcctcctgtgaaa
tttaatccacttcctgaagccgaccttcacaaaagcatcgttgagtcctctcccgtggtg
ctgtactgtcaggtgtctcgccccgacgctcctgtgcgctggtacaaggatggaattgaa
atccaaccaaacgatggcattactgttcaatctgacaaaacaatgaggcgactggttatc
caatcatcaaaactctcagactctggggtttacacctgccatgcagtagatgatgcagtg
gttttcaatgtgaacattcaagagccacctgtgactgtagtacatccaaggggggatgtc
catctggagcaccaggtttctgaacaaattgtgttgagctgtgagctgtcccgctccaat
gcagctgtgcactggtacaaggatggccaagagctcttggaaagcgatgatgtcatcctg
gaatctgagggacctcacaggagactaattatcctccagggacgccctgaaaattctggg
gagtatgtttgtgacacagcagacgactcaattttctatcaggttacagtgacagaacct
gcagtccagatcgtgtcccccagccagtcccccatggtgttagaattcctcacagaagag
tgtgtggtgctgagctgcgaggtctctcgacccaatgcagatgtgtgctggtaccaggat
gggctagagttagaggagacggaagatctcatcctggagaccgaaggagtccacagaagg
ctcattatccccaaggctgcagtccaagactctgctgaatacatctgtgacgcagttgat
gattcagtgaccttcatggtgaaaattacagaaccgccagtgaagtttgtgcggcctcac
aaagcccctggggctgtgaaagttttcgtgggagaccctgtggtgctggagtgtgaagtc
tcccattctaatgcgaaggtgagctggcggaaagagggacaggagatggaggacagcaaa
gaggtcaccatcgaggaggttggagttcttcggcggctgaccatccactcccccaagctg
gaggattctgggaattacttttgtgacgccaaagacgagacaatggatttcagagtgaaa
gttactgaggcaccagtgcagatcaagcggaaaggggaactgaagactcagcagcaggtt
atggtttcagacgatgttgtcctggagtgtgagctctctcgagccaatgggaccatcaag
tggtacaaggacggagagaaaatcacagataatgagcgtgtctgcctggaggaggagggg
gctttccgctcgctggtcatcctgaatgcagagacctcagactcaggggaatacttctgt
gatgcctgtgacgacagtgttgtgttccatgtctgtgtgaaagagccaccagtgaccatt
ataggaaattctgacagccctgagcaccacagtctgattgctggtgatgaccttgtgttg
tcctgtgaactctcccggtccaacgccacggtggagtggtactgcaacgggaagcccctg
tcctcagaagactcccgtatctgcatagagaccatcggctcagtgcgccagctggtcatc
tcaggccttcgaccctcagattcagccgaatacatctgcaatgcaggcgatgacaaaatg
gttacgacggtaactgtaaaagagccacctgttcaaattctgaacaaagaagatgcgaag
gagtcaattgatgttgtggagaatgacagcgtgacgctgtgtgcgcgggtctccaaggaa
gacgccgcggtgcagtggttaaagaactggaaggacataagtggggaacgctactgcgca
agcagtgacgggaagtcccgcctcttcagcattcgcaaagtgcagctgtcagacagcgga
gtgtacacatgtgatgccttcagtgatgaaattcacttcaccttgcaggtcaaagcggct
cccatcaagtttgaacgcaaacaggaaaaaccagaggacgtgtttgccacagaaactgaa
aacaccatcatgtcagcagtggtgtcaagtgaaaaaagtgaggtgaagtggctccgtcac
caaagccagatctttgacagtgagaagtacgagacgagggtggagggcagagttcacagc
ctcattgtgaagaacacatccaaggaagactgcggcatgtatacctgcatctctcaggac
gatgaaatggtgtttgtcgtcagtgtgaaagagctgaagttgaattttgtccgaagtttg
gaagaggtctacgcttacaaggacgacacgatcattctacgttgcgagctctgcaaaccc
aagggagatgtccagtggctgaaagatggccaacagatccttcccagcagacatcttgct
atgaaggccgaaggtcgcgagcgctcactgaccattcaccgtgctacaggcaacgacacc
ggggagtatatctgtgaatccaaagatgacaaaacatgtgccagagttactgtggagatg
cctcgggtggtggaggtcatcgcagaactgcacaacgtcaccgtgctggaaggggaagac
gccacattgaagtgcgttgtgtcaccagaagatgccaagctggtgtggcacaggaacggc
aatgtggttgttccagatgacaagtttgtggtgtccagaaaagggctgtgtcacacactg
accatccgggactgccagcttactgatagctccaaggtgacggctgaggctgagggggtg
gtgtcgaaggcaaaccttcaggttcaggaagcgcaggtcctgttcacaaagaagatggaa
gccgtggttgcagaggagcacggggaggccacgctggaagtggaggtcagtctggagtca
ggggaggtccagtggatgagacagggtgtggtcatccagcccagccccaaattcacactg
agtgcgaaagggaggaagcgcagcctcactgtccacaacctcaccttctcagaccggggc
accttccgctgcgagactctacatgaccggacacagggcaagctcaacgtggagcccagg
aaaatctcaatcaagaaaggcctgacggatacagaaacgttagagcgggagacggcctcg
tttgaggtggaggtctcgcacgtggatgtgcagggggtgtggcagaaggacgggatccgc
atcaaacccaacaataactggcgagtcagcacccatgggagagtgcacgcactcaccctg
tacaacctcacactggaggacagtggcaccgtcaccttcagtgcagagagtgtgagaaca
tcagcaagactcactgtgaaagaacccccagtgatattcctgagagctctggaggatctc
cggatacccgaaagctctggagcatcgcttgagtgtgagctgtccagacagaatgcagat
gttaagtggttaaagaacggagaggagctgaaaccaggaaagaactatcgcatctactca
atggggaggaagcggtttcttcagataacgaagtgcgggatcgcagattcagggacttac
acctgcgacgctgtggacagcaaagtgaccgctgtcttggatgtctatgagcgggatgtg
gagatagtgcaaggactgcaggatgctattatccaggaagacaagaacgctgtatttatg
tgcgaggtgtcagtggaggatgtgaagggtgagtggctgagaaacggggagaaaatcagg
cccaccagcaatgtcagaattcgtcaggaagggaataagcacttcctcctgatttgcaat
gtgaaggcagaggattctgggaagattacatttgttgctaaacaagcagaatccacagcc
aacctggaagtggaagagctcccagtgcagatcgtgaagcccctgcgtgataagaccgcc
ctggagaagcaccgtgtgatcctggagtgcaccgtgtcaaacccacgatgcagtgtgcgc
tggtaccaaggagagaccctcatcctgccctcagaccactacgagatctgcagcgagggc
tgctaccgcaaattggtcatccagcatgtcactgccatggacgaggggacttacagtgtc
caggttggggagcacgagtcctctgcgcgcctgttagtggaagagcaggctatcctggtg
gtgcgacagctggaggatgtggaagtgaaggccccggaagaagcccgctttgagtgcgag
atctccgtgcccattgtcaagccaccccagtggagtctgaacgggcagcccctgcagaac
gggaatggggttcgaatggagagtgccggcacagtgcacaggctcatcctgaaggagacc
tcgtctgaaatggttggaatcgtcaaattcactactggaaaagcccggtcaagcgcgagg
ctcagtatcaagtgttga
DBGET
integrated database retrieval system