Acipenser ruthenus (sterlet): 117426884
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Entry
117426884 CDS
T07327
Name
(RefSeq) integrin beta-5-like isoform X1
KO
K06588
integrin beta 5
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04145
Phagosome
arut04148
Efferocytosis
arut04510
Focal adhesion
arut04512
ECM-receptor interaction
arut04810
Regulation of actin cytoskeleton
arut04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117426884
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117426884
04148 Efferocytosis
117426884
09144 Cellular community - eukaryotes
04510 Focal adhesion
117426884
09142 Cell motility
04820 Cytoskeleton in muscle cells
117426884
04810 Regulation of actin cytoskeleton
117426884
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arut04131
]
117426884
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
arut04515
]
117426884
Membrane trafficking [BR:
arut04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
117426884
Cell adhesion molecules [BR:
arut04515
]
Integrins
Integrin beta subunits
117426884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
PSI_integrin
EGF_integrin
Integrin_b_cyt
I-EGF_1
EGF_2
vWA_SIBA-E
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
117426884
NCBI-ProteinID:
XP_033900938
LinkDB
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Position
12:37691051..37733566
Genome browser
AA seq
771 aa
AA seq
DB search
MSGSATSCEECLLIHPDCAWCAQEEFGSRRTVTSRCDYRESLMKRGCEKHFIQSPSSSMA
VLKNMPLSSKGSGPTQYDVIQIMPQKIALNLRPGDQTSFGVQVRQVEDYPVDLYYLMDLS
LSMKDDLDTIRNLGTKLAEEMKKLTSNFRLGFGSFVDKNISPFSYTAAKYRNNPCNGYKL
FPNCVPSFGFRHLLSLTDKVDRFNEEVQKQMVSRNRDAPEGGFDAILQAAVCKDKIGWRK
EAFHLLVFTTDDVPHLALDGRLGGVVQPHDGQCHLNEKNEYSGSTKMDYPSLALLGEKLA
ENNIHLIFAVTKRLYVIYKNFTALIPGTTVEILDQDSKNIIQLIINAYNSIRSKVELTVW
DHPEDINLSFTATCQDGRPRPGLRKCGDLKIGDTVSFNVSVDARGCPAEDTRHKFTIKPV
GFKDTLEVTVNYKCTCGCTTETENNSTKCSSIGTYQCGICSCDPGYLGAQCECQEGEDSM
YQTMCREAEGKQICSGRGECSCNQCLCYESEFGKIYGTFCECDDFSCARHKGILCSGHGE
CHCGECKCHAGYIGDSCICSTETDTCLSNDGQICSGRGNCVCGECQCSEPGAFGDTCEKC
PTCPDACGTKRDCIECRLFNSGRLADNQTCHRLCTDEIITVDTLNTDDQNAVLCLYKTEN
DCVMKFTYSEHASGQSVLAALKEPECGTPPDALTVLLAVVGSILLVGIVLLAIWKLIITV
HDRREFARFQSARSRARYEMASNPLYKQPISSHAVETVFNMQNKSYNGTVH
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcagtgctacctcttgtgaagagtgccttctcatccatccagactgtgcctgg
tgtgcccaagaggaattcggcagtaggaggacagtcacttcaagatgcgactacagggaa
agcctgatgaagaggggctgtgagaagcactttatccagagccctagcagcagcatggcc
gtgctcaaaaatatgcctttaagctccaagggctccggtcccacccagtacgatgttatt
cagataatgcctcagaagattgctctcaatctgagacccggtgaccagacctcttttggg
gtgcaggtgcggcaggtggaggactatcccgtggatctctactacctgatggacctctcc
ctctccatgaaggacgacctggacaccatccgcaacctgggcaccaaactggcggaagaa
atgaaaaagctcaccagcaatttccgtctgggctttggctcgttcgtggacaaaaatata
tccccgttctcctacacagcggcaaaatatcggaacaacccctgcaacggatacaagctg
ttcccgaattgcgtcccgtcgtttgggttccgccacctcctatccctgactgacaaagtg
gaccggttcaacgaggaagtgcagaagcagatggtgtctcggaacagggacgcgcctgag
ggggggtttgacgccatcctgcaggctgcggtgtgcaaggacaagattggctggaggaag
gaggcgttccacttgctggtcttcaccacggatgacgttccacaccttgcgctagacggc
aggctgggcggagtggtccagccgcacgatgggcagtgtcacctgaacgagaagaatgag
tacagcggctccacaaagatggattatccatcacttgcactcctgggggaaaaactagca
gaaaataacatccatctcatcttcgctgtgacaaaaaggctctacgtgatttacaagaac
tttactgcactgataccagggacgactgtggaaattcttgaccaggactccaagaacata
attcagctgatcatcaatgcctataatagtatccgttctaaagtggagttgactgtctgg
gatcacccggaagacattaatctgtccttcacagccacttgtcaggacggacggccacgc
ccagggctcaggaagtgcggggacctcaaaatcggggacactgtctctttcaatgtatct
gtggacgccaggggctgccctgctgaggacaccaggcacaagttcactatcaaacccgtc
ggctttaaggatactctggaggtcactgtcaactacaagtgtacctgcggatgcaccaca
gagacagagaacaacagcaccaagtgcagcagcatcggcacctaccagtgtggcatctgc
agctgtgatcctgggtacctgggagcccagtgcgagtgccaggagggcgaggacagcatg
taccagaccatgtgccgggaggccgaggggaagcagatctgcagtggcaggggggagtgc
agctgcaatcagtgcctctgctatgagagcgagtttgggaagatatacgggacattctgt
gagtgcgacgacttctcctgcgcccggcacaaaggcattctctgctcaggtcatggggaa
tgccactgtggagaatgcaagtgtcacgccggctatatcggagacagctgtatctgctcg
acagaaacagatacgtgtctttccaatgatggtcagatctgcagcggccgggggaactgt
gtctgcggggaatgccagtgcagcgagccgggagctttcggggacacctgcgaaaaatgc
cctacctgccctgacgcctgtggcacaaagagagactgcattgagtgcaggttatttaac
tcaggaaggcttgccgacaaccagacctgtcacagactctgcacggatgagatcatcaca
gtggacacactcaatacagatgaccagaatgcagttctgtgcctgtataaaactgagaac
gattgtgtgatgaagtttacgtactcggaacacgccagcggccagtcggtcctcgctgca
ctcaaagagcctgagtgcggcactcctccggacgcgctcacggtgctcctagctgtcgtc
ggcagcatcctgctggtgggcatcgtgctgctggcgatttggaagctcatcatcactgtc
cacgacagacgggaatttgccaggttccagagtgcccgttccagagccagatacgagatg
gcatccaatcccctgtacaagcagcctatctctagccatgctgtggagactgtgtttaac
atgcaaaacaagtcatacaatggcacggtccactga
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