KEGG   Acipenser ruthenus (sterlet): 117426884
Entry
117426884         CDS       T07327                                 
Name
(RefSeq) integrin beta-5-like isoform X1
  KO
K06588  integrin beta 5
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut04145  Phagosome
arut04148  Efferocytosis
arut04510  Focal adhesion
arut04512  ECM-receptor interaction
arut04810  Regulation of actin cytoskeleton
arut04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:arut00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    117426884
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    117426884
   04148 Efferocytosis
    117426884
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    117426884
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    117426884
   04810 Regulation of actin cytoskeleton
    117426884
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:arut04131]
    117426884
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:arut04515]
    117426884
Membrane trafficking [BR:arut04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    117426884
Cell adhesion molecules [BR:arut04515]
 Integrins
  Integrin beta subunits
   117426884
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail PSI_integrin EGF_integrin Integrin_b_cyt I-EGF_1 EGF_2 vWA_SIBA-E EGF_Teneurin
Other DBs
NCBI-GeneID: 117426884
NCBI-ProteinID: XP_033900938
LinkDB
Position
12:37691051..37733566
AA seq 771 aa
MSGSATSCEECLLIHPDCAWCAQEEFGSRRTVTSRCDYRESLMKRGCEKHFIQSPSSSMA
VLKNMPLSSKGSGPTQYDVIQIMPQKIALNLRPGDQTSFGVQVRQVEDYPVDLYYLMDLS
LSMKDDLDTIRNLGTKLAEEMKKLTSNFRLGFGSFVDKNISPFSYTAAKYRNNPCNGYKL
FPNCVPSFGFRHLLSLTDKVDRFNEEVQKQMVSRNRDAPEGGFDAILQAAVCKDKIGWRK
EAFHLLVFTTDDVPHLALDGRLGGVVQPHDGQCHLNEKNEYSGSTKMDYPSLALLGEKLA
ENNIHLIFAVTKRLYVIYKNFTALIPGTTVEILDQDSKNIIQLIINAYNSIRSKVELTVW
DHPEDINLSFTATCQDGRPRPGLRKCGDLKIGDTVSFNVSVDARGCPAEDTRHKFTIKPV
GFKDTLEVTVNYKCTCGCTTETENNSTKCSSIGTYQCGICSCDPGYLGAQCECQEGEDSM
YQTMCREAEGKQICSGRGECSCNQCLCYESEFGKIYGTFCECDDFSCARHKGILCSGHGE
CHCGECKCHAGYIGDSCICSTETDTCLSNDGQICSGRGNCVCGECQCSEPGAFGDTCEKC
PTCPDACGTKRDCIECRLFNSGRLADNQTCHRLCTDEIITVDTLNTDDQNAVLCLYKTEN
DCVMKFTYSEHASGQSVLAALKEPECGTPPDALTVLLAVVGSILLVGIVLLAIWKLIITV
HDRREFARFQSARSRARYEMASNPLYKQPISSHAVETVFNMQNKSYNGTVH
NT seq 2316 nt   +upstreamnt  +downstreamnt
atgagtggcagtgctacctcttgtgaagagtgccttctcatccatccagactgtgcctgg
tgtgcccaagaggaattcggcagtaggaggacagtcacttcaagatgcgactacagggaa
agcctgatgaagaggggctgtgagaagcactttatccagagccctagcagcagcatggcc
gtgctcaaaaatatgcctttaagctccaagggctccggtcccacccagtacgatgttatt
cagataatgcctcagaagattgctctcaatctgagacccggtgaccagacctcttttggg
gtgcaggtgcggcaggtggaggactatcccgtggatctctactacctgatggacctctcc
ctctccatgaaggacgacctggacaccatccgcaacctgggcaccaaactggcggaagaa
atgaaaaagctcaccagcaatttccgtctgggctttggctcgttcgtggacaaaaatata
tccccgttctcctacacagcggcaaaatatcggaacaacccctgcaacggatacaagctg
ttcccgaattgcgtcccgtcgtttgggttccgccacctcctatccctgactgacaaagtg
gaccggttcaacgaggaagtgcagaagcagatggtgtctcggaacagggacgcgcctgag
ggggggtttgacgccatcctgcaggctgcggtgtgcaaggacaagattggctggaggaag
gaggcgttccacttgctggtcttcaccacggatgacgttccacaccttgcgctagacggc
aggctgggcggagtggtccagccgcacgatgggcagtgtcacctgaacgagaagaatgag
tacagcggctccacaaagatggattatccatcacttgcactcctgggggaaaaactagca
gaaaataacatccatctcatcttcgctgtgacaaaaaggctctacgtgatttacaagaac
tttactgcactgataccagggacgactgtggaaattcttgaccaggactccaagaacata
attcagctgatcatcaatgcctataatagtatccgttctaaagtggagttgactgtctgg
gatcacccggaagacattaatctgtccttcacagccacttgtcaggacggacggccacgc
ccagggctcaggaagtgcggggacctcaaaatcggggacactgtctctttcaatgtatct
gtggacgccaggggctgccctgctgaggacaccaggcacaagttcactatcaaacccgtc
ggctttaaggatactctggaggtcactgtcaactacaagtgtacctgcggatgcaccaca
gagacagagaacaacagcaccaagtgcagcagcatcggcacctaccagtgtggcatctgc
agctgtgatcctgggtacctgggagcccagtgcgagtgccaggagggcgaggacagcatg
taccagaccatgtgccgggaggccgaggggaagcagatctgcagtggcaggggggagtgc
agctgcaatcagtgcctctgctatgagagcgagtttgggaagatatacgggacattctgt
gagtgcgacgacttctcctgcgcccggcacaaaggcattctctgctcaggtcatggggaa
tgccactgtggagaatgcaagtgtcacgccggctatatcggagacagctgtatctgctcg
acagaaacagatacgtgtctttccaatgatggtcagatctgcagcggccgggggaactgt
gtctgcggggaatgccagtgcagcgagccgggagctttcggggacacctgcgaaaaatgc
cctacctgccctgacgcctgtggcacaaagagagactgcattgagtgcaggttatttaac
tcaggaaggcttgccgacaaccagacctgtcacagactctgcacggatgagatcatcaca
gtggacacactcaatacagatgaccagaatgcagttctgtgcctgtataaaactgagaac
gattgtgtgatgaagtttacgtactcggaacacgccagcggccagtcggtcctcgctgca
ctcaaagagcctgagtgcggcactcctccggacgcgctcacggtgctcctagctgtcgtc
ggcagcatcctgctggtgggcatcgtgctgctggcgatttggaagctcatcatcactgtc
cacgacagacgggaatttgccaggttccagagtgcccgttccagagccagatacgagatg
gcatccaatcccctgtacaagcagcctatctctagccatgctgtggagactgtgtttaac
atgcaaaacaagtcatacaatggcacggtccactga

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