KEGG   Acipenser ruthenus (sterlet): 117426929
Entry
117426929         CDS       T07327                                 
Name
(RefSeq) polyubiquitin-C isoform X1
  KO
K08770  ubiquitin B/C
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut03320  PPAR signaling pathway
arut04120  Ubiquitin mediated proteolysis
arut04137  Mitophagy - animal
arut04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:arut00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    117426929
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    117426929
   04137 Mitophagy - animal
    117426929
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    117426929
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:arut04121]
    117426929
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:arut04147]
    117426929
Ubiquitin system [BR:arut04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   117426929
Exosome [BR:arut04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   117426929
  Exosomal proteins of other body fluids (saliva and urine)
   117426929
  Exosomal proteins of colorectal cancer cells
   117426929
  Exosomal proteins of bladder cancer cells
   117426929
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 Rad60-SLD_2 DUF2604 TBK1_ULD Ubiquitin_5
Other DBs
NCBI-GeneID: 117426929
NCBI-ProteinID: XP_034757965
LinkDB
Position
19
AA seq 457 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPADTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPADTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGQ
NT seq 1374 nt   +upstreamnt  +downstreamnt
atgcagatctttgtgaagaccttgactggtaagaccatcaccctggaggttgagcccagt
gacaccattgagaacgtcaaggccaagatccaagacaaggaaggcatccccccagaccag
cagaggctgatcttcgctggcaagcagcttgaagatggccgtaccctgtccgactacaac
atccagaaggaatccaccctgcacttggtgctgcgtctgaggggaggtatgcagatcttt
gtgaagaccttgactggtaagaccatcaccctggaggttgagcccagtgacaccattgag
aacgtcaaggccaagatccaagacaaggaaggcatccccccagaccagcagaggctgatc
ttcgctggcaagcagcttgaagatggccgtaccctgtccgactacaacatccagaaggaa
tccaccctgcacttggtgctgcgtctgaggggaggtatgcagatctttgtgaagaccttg
actggtaagaccatcaccctggaggttgagcccagtgacaccattgagaacgtcaaggcc
aagatccaagacaaggaaggcatccccccagaccagcagaggttgatcttcgctggcaag
cagcttgaagatggccgtaccctgtctgactacaacatccagaaggaatccaccctgcac
ttggtgctgcgtctgaggggaggtatgcagatctttgtgaagaccttgactggtaagacc
atcaccctggaggttgaaccagctgacaccattgagaacgtcaaggccaagatccaagac
aaggaaggcatccctccagaccagcagaggctgatcttcgctggcaagcagcttgaagat
ggtcgcacgctgtccgactacaacatccagaaggaatccaccctgcacttggtgctgcgt
ctgaggggaggtatgcagatctttgtgaagaccttgactggtaagaccatcaccctggag
gttgaaccagctgacaccattgagaacgtcaaggccaagatccaagacaaggaaggcatc
cccccagaccagcagaggttgatcttcgctggcaagcagcttgaagatggtcgcacactg
tccgactacaacatccagaaggagtccaccctgcacttggtgctgcgtctgaggggaggt
atgcagatctttgtgaagaccttgactggtaagaccatcaccctggaggttgagcccagt
gacaccattgagaacgtgaaggccaagatccaagacaaggaaggcatccccccagaccag
cagaggttgatcttcgctggcaagcagcttgaagatggtcgcacgctgtccgactacaac
atccagaaggagtccaccctgcacttggtgctgcgtctgaggggaggacagtaa

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