Acipenser ruthenus (sterlet): 117427009
Help
Entry
117427009 CDS
T07327
Name
(RefSeq) CAP-Gly domain-containing linker protein 1-like isoform X1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
117427009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
arut03036
]
117427009
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
arut04812
]
117427009
Chromosome and associated proteins [BR:
arut03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
117427009
Cytoskeleton proteins [BR:
arut04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
117427009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
ATG16
DUF1664
ERM_helical
ACBP4_C
Motif
Other DBs
NCBI-GeneID:
117427009
NCBI-ProteinID:
XP_034758199
LinkDB
All DBs
Position
19:24539385..24588913
Genome browser
AA seq
2329 aa
AA seq
DB search
MSMLKPSGLKAPSKISKAAATATKTSTAAAPAKQASVDKTSSSPASASQEDFVDDFHVGE
RVWVNGNKPGFIQFLGETQFAPGQWAGIVLDESIGKNDGSVGGVRYFQCEAQRGIFTRPS
KLSRNPLADGEANGTQTAPQSRSTSPARDSASVSLPPPASSASAAQKTSTTPVTPTTPTT
PVTNLTRTASESVSNLSEAGSVKKGERELKFGDRVLVGGTKAGVVRFLGDTDFAKGEWCG
VELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTKIGFPSTTPAKSKTPARKVLPTPS
GLKRSPSASSISSLSSVASSVGGKPSRTGLLTETSSRYARKISGTTALQEALKEKQQHIE
QLLAERDVERGEVAKATSHVGEIEQELSLLRSGHEQYVLEMESKMDQLRTLVEGADKDKV
DLVNQLEEEKRKVEDLQFRVEEACITKGDLETQTKLEHARIKELEQSLLFEKTKADKLQR
ELEDTRVATVSEKSRIMELERDLRSQVREVSELRHRLEASRGSGESDTAAPLLEELSSLR
DQLASISKDHQMELHALKEKLRSSEQAREAELSQLQADSEKLSKENTSLKTKLNQASQEN
SDVIELWRSKLESAGASHQQTMEELKMSFSKGASGQATELIELKSSVEKLKLEHKMKLEN
IRAKHVAENSVCFKEIEDLKTKLLEVTEEKEKLVENLKTNLEDIEEQHLVEMEDALNKLH
NAEEKVKELEAFEAKASEQTKAIETLKQELRAAEDKLKDLDLLKKAEEAGMVEIRSLEEK
LETAEALAASQDSKANNFAKELEGKDEKLSSLEQSLAALSQDKASLEQQLQTLKQNLDGT
ADDHKKVQQTMQALLEKLSKKDEQCSSLSNEVEALKTKFGEMERKMKSSEERAEQLTKDK
ARLESDITETMKSSGDSSAQLTKMNDELNQKERKLEQLQTRLSEANEKAAQMEESLKQAT
CRAEQVQLETNGKHQAEVKSMQQRLGEMEQKVEKSIAQNKDLQATHEKTLAEVTVKNKQL
VDELKQKAQQSDQALASAQERISKMEAVITELKQHKEQAASVTSELASAKAEVKQLTEDV
RELNSEKNKFMLEGEKLGSERDLLVKKISDVEMTYSDLEKKHQSLLSQSEELRVEKEELR
KEKEEFQSRNQQLEQEKGALTSDKEQLDQEVEHLKAEIEKSAAETESLQTSKLELTSKLE
ELQKSIEARKVDLLKYQQEILHENSARQNLLAENEEIIKQKDDILEELKQTQEKASQEHK
KLMEQREAVECQKKVLEVAHSELQVRHSALEIEREHLAQVNSKLLLEKEKLEKDKAELDS
NLQKTVLEKDASAAKKGELQSQLNSVKKDLDKMVRDTAELLASKESLAKLLEEIKTSREV
TDSERVHLLQEKEDLLAAQRRVCAENEELLREREETSEKLRLLGEEADATREKFRQEKEA
FGREKEALHQKWVELENKFQALLEEKKTLESKIESEKDSYMKEREDLTEKHEKELSEKEA
LALERDQLAVNVESVKGELEKTAQENADLQAAKSSLSSLLDQLQQGKEAVESAHASLQRE
KDELKAQLQKECMEKESLVKEKVDLEEKCQKLEAAAIDVQGERTLERDAVQMEKDSLTDQ
QLELRDKLQSLQKEKEDLAVQYKDLLLKKESILKEKEELQSQQKHSAEEKHSLLAEKDGL
VSKIEELQKEAEALSQENAKLHASESSLLKDLDALRSSQEATDSDCTKLLREKEDLKAAH
AKLLSKNQELLHEKQQLEQAHKDLCEEAATTTKDKEDISARLSDVSNEKEALIKGKEDLE
SQLKRSGDEKQDLVAEKDSLASKIEELKHEVEALTKEKAGLQASESSLLRKLEALSSSQQ
VTDSDRTRLLQEKEDLQAAHAKLLSENHELLKDKKQLELIYKNSCEQSAVTAQEKGEFAS
RLEEMKTERETLLKEKREGTMKLTELEALHKSAISEKLEAAKTAEEALHSLDQITKEKND
TKASLEETKQTNQKLQHELDALKQQNSRFQEELNVSKEQLASENKRTDGLSKEIEELKLA
AVQKSQHLSALQEENVKLCAELGSSREEVSSHQKLEEERSALNNQLLEMKKSLPNNTLRE
SLLKKGSNEEKASLEKSIQKTSALISEKDKELEKLRNEITVLRGENAKTKTLQSAVQSLE
TDKAKLQEKVQNLEKKLTENKRDNNTGSPGDAHLEQLREDRESAESQQDMLDFLNSVIID
LQRKNEELKSKLEKMAEASLNGNNASELDNYDSFNETQEKKKKPAPRLFCDICDCFDLHD
TEDCPTQAQMSETPPHTAYHGSRKDERPYCDICEVFGHLTNSCNDDETF
NT seq
6990 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgcttaaaccgagcgggctgaaagctcccagcaagatcagtaaagcagcagcc
actgcaaccaaaaccagcacagccgctgctccagcgaaacaagcctccgtagacaagacc
tcctcaagcccggcatcggcgtctcaggaggactttgtggatgattttcacgtcggagag
cgagtctgggtcaatggaaacaaacccggattcattcagttcctgggggagactcagttc
gcccctggccagtgggcaggaattgttttggatgaatcgatagggaaaaacgatgggtcg
gtgggcggggtgcgatactttcagtgcgaagcccaacgaggcatatttacccggccgtcc
aagctatcccgcaatcccctagcggatggcgaggccaacggcacgcagacagccccccag
tctagaagcacgtcccccgcacgcgactctgccagcgtgtccttgccgccaccagcatct
tccgcctcagctgctcaaaagacatcaaccaccccggtcactcccaccacgcccaccacc
ccagtgaccaacctcacaaggactgccagcgagtccgtatcaaacctgtctgaggcgggc
tccgtaaagaaaggggagagggagttgaaattcggggatcgtgtcctggttgggggtacg
aaggctggagtggtgagattcctaggagatacagactttgcgaagggagagtggtgtgga
gtcgagcttgatgagcccttgggaaagaatgatggggccgtggctggaaccaggtacttc
cagtgccagcccaaatatgggttatttgcaccagtccataaagtaacaaagattggattt
ccatctacaacgccagccaagtcaaaaacaccggcacggaaagtactacctaccccgtca
ggcctgaaacgaagccccagcgcctcctccatcagctccctcagctcggttgcttcttca
gtgggcggcaaacccagccgcactggcctgctcacagagacctcctcccgatatgcaagg
aagatctcgggcaccacagccctgcaggaggccctgaaggagaagcagcagcacatcgag
cagctcctggccgagcgggatgtggagagaggcgaggtcgccaaggcaaccagccacgtg
ggagaaatcgagcaggagctctcactgctccgatcaggccatgaacagtatgtgttggaa
atggagtctaagatggaccagctgcgcacgctggtggagggtgcggacaaggataaagtg
gacctggtcaaccagctggaagaggagaagaggaaggtagaggacctgcagttccgggtg
gaggaggcttgcattaccaaaggagatctggagacgcagaccaaactggagcatgcccgc
attaaggagcttgaacagagcctgctctttgaaaagaccaaagctgacaaactccagaga
gagttagaagacactagggtagccactgtatcggagaagtcccgcatcatggagctagag
agagatctgaggtcccaggtgagagaggtgtctgagctccgtcacagactggaggcttcc
agggggtcgggcgagtccgacactgctgctccgctgctcgaggaactgagctctttgaga
gaccagctcgcctccataagcaaagatcaccaaatggaactccatgccttaaaagaaaaa
cttagaagttcagagcaggcgcgtgaagcggagctgtcccagctccaggctgacagtgag
aaactctccaaagagaacacatccttgaagaccaaactaaaccaggccagccaggagaac
tcggacgtcattgaactgtggcgttcgaagctggaatccgccggcgcttcacaccagcaa
accatggaagagctcaaaatgtccttcagcaaaggggccagcgggcaggccacagagctc
atcgagctgaagagcagcgtggagaagctgaagctggagcacaaaatgaaacttgaaaat
atcagagcgaaacatgtcgccgagaactctgtgtgcttcaaagagatcgaggacctgaag
accaagctgctggaggtcactgaggagaaggagaagctggtggagaacctcaagaccaat
ctggaggacatagaggagcagcacctggtggagatggaagacgccctgaacaagctgcac
aacgcggaagagaaggtaaaagagctggaggcgtttgaggcaaaggccagtgagcaaaca
aaggccattgagacgctgaagcaggagctgagggctgcagaagacaagctgaaggatctg
gacttgctgaagaaagcagaggaggcaggtatggtggagatcaggagcctggaggaaaag
ctggagacggctgaagccttggcagcttctcaggacagcaaggctaataactttgccaaa
gagcttgagggaaaagatgagaaactttccagtctcgagcagagcctggcagcattgagc
caggacaaggcctctttggaacagcagctgcagactttgaaacagaaccttgatggcaca
gcagacgatcacaagaaagtccaacaaactatgcaagcattacttgaaaagctcagtaaa
aaagatgaacagtgctcgtccctgtctaacgaggtggaggccttgaaaactaaatttgga
gaaatggaaaggaaaatgaagtccagcgaggagagagcggaacagctgaccaaagacaag
gcgagactggagagtgacatcaccgaaacgatgaagtcatcaggggacagctctgcccag
ctcacgaaaatgaacgacgagcttaaccagaaagaaagaaagctagagcagctgcagacc
cggctttcagaggccaatgaaaaggcagcccagatggaggagagcctcaagcaggcgaca
tgcagagcagagcaggtccagctggagacgaacgggaagcaccaggcagaagtgaaatcc
atgcagcagagactgggagagatggaacagaaagttgagaagagcattgcccagaacaag
gacttgcaggccactcatgagaagacccttgcagaagtgactgtgaagaacaagcagctt
gtggacgagctgaagcagaaggcacagcagagtgatcaagcgctggcgagcgcgcaggag
aggatcagcaaaatggaggcagtgatcaccgaactcaaacagcacaaggagcaagctgcg
tctgtaacttctgagctagcatcagccaaagctgaggttaagcaattaacagaggacgtg
agagagctgaactccgaaaaaaacaagttcatgctagaaggagagaagctcgggtctgaa
agagacttgctcgtgaagaaaatatcggatgtggaaatgacatattccgacctggaaaag
aagcaccagagcctgctctcacaaagcgaagagctgcgagtggaaaaggaagaactgcgc
aaagaaaaggaggaatttcagtctagaaaccagcagctcgaacaagagaagggagctctg
acatcagataaagagcagcttgatcaggaggtagagcacctgaaagcagagattgaaaag
tcagctgcggagacggaaagccttcagacctccaagctggaactgacgagcaaactggag
gaacttcagaaatccatcgaggccagaaaggttgatcttctgaaatatcaacaggagatc
ctgcatgagaactctgctaggcagaatctgttggcagaaaatgaggagatcatcaaacag
aaggacgacatccttgaggagctgaaacagactcaagaaaaagcatcacaagagcacaag
aagcttatggagcaaagggaagcagtggaatgccagaagaaggtgctggaggtcgcacat
tctgagcttcaagttcgacacagcgctttagaaatagagagggaacatctggctcaagta
aactccaagctgctcttagaaaaagagaaactagaaaaagacaaagcagaacttgactca
aatctgcagaagactgtcttggagaaagacgcctcagcagccaaaaaaggagagcttcag
agccaactgaacagcgtcaagaaggacctggacaagatggtccgcgatactgctgaactc
ctagcctcgaaagaaagcttggctaaactcctggaagaaattaagaccagtagggaggtg
acggattccgagcgggttcatctgctccaggaaaaagaagacctgcttgcagctcagagg
agggtgtgtgctgagaatgaggagcttctgagagagagggaggagacttcagagaagctc
cgtctgttgggtgaggaggcagacgccactcgagagaagttccggcaggagaaagaagcc
ttcggaagagagaaagaggctctccatcaaaagtgggttgaactcgagaacaagttccag
gcactgctggaagaaaagaaaaccctggaatccaaaattgagtctgaaaaggattcctac
atgaaggaaagagaagatctgacggagaagcatgagaaggagctctcggagaaggaagcc
ttggctcttgagagggaccagcttgcagtcaatgttgagagtgtaaaaggggaacttgaa
aaaacggcccaagaaaacgccgacctgcaagcggcgaaatccagcctgtcttctctcttg
gaccagcttcagcaaggtaaggaggctgttgaatcggcgcatgcttccctccagcgggaa
aaagacgaactaaaagcacagcttcagaaggaatgcatggaaaaagaatcccttgtgaaa
gagaaggtggacctggaagagaagtgtcaaaaactagaagcagcagccattgacgtgcag
ggtgagcggactctcgaaagggatgctgttcaaatggaaaaggattccctcacggaccag
cagttggagcttagggacaaattgcagtcgttgcagaaggagaaagaggatcttgctgtt
cagtataaagacctgctgttgaagaaagagtccattcttaaagagaaggaagaactgcag
tcccaacagaagcacagtgctgaggagaaacacagtctactggctgagaaggatgggctg
gtgtccaagattgaggagctgcagaaagaggctgaagctttatctcaagagaatgctaag
ctgcatgcttctgagtccagcctcttgaaagacttggatgccctacgcagtagccaagaa
gcgacagactctgattgcaccaaactgctgcgggagaaggaagacctgaaggctgctcat
gcaaaactgctctccaagaatcaggagcttctccatgagaagcagcaattggagcaggca
cacaaggacttgtgtgaagaagccgccactaccaccaaggacaaagaagacatttcagcc
aggctgagtgacgtgagcaatgagaaagaagccttgattaaagggaaagaagacttggag
tcccagctaaagcgcagtggggatgagaaacaagatcttgtggccgagaaggacagtctg
gcttccaagattgaggagctgaagcatgaagtggaggctttgactaaggagaaggctggg
ctgcaggcctcggagtccagcctccttaggaagctagaagcactctctagcagccagcag
gtgacggactctgatcgtaccagactgctgcaggagaaagaagaccttcaggcagctcat
gcgaaactgctctccgaaaaccatgagcttctcaaggacaagaaacagctggagctgatt
tacaagaactcgtgcgagcaatctgctgtcactgcacaggagaaaggagagttcgcaagc
agactggaagaaatgaagaccgagagagagaccctgctcaaagagaagagggaaggaacc
atgaaattaacagaacttgaggctcttcacaaaagtgctatttcagagaagcttgaggct
gcaaaaacagctgaagaggctctgcactccctggaccagataaccaaggagaagaacgac
accaaggcctcactagaggagaccaagcaaacaaaccagaaactgcagcatgagcttgat
gcattaaaacaacagaactcaaggtttcaagaggaacttaatgtgtcgaaagagcaactc
gcatcagagaacaagaggacagacggcctcagcaaggaaatcgaggagctgaagctggca
gcagttcagaagtcccagcatctctcagctctgcaagaggagaacgtgaaactgtgtgca
gagctgggctcgagccgagaggaggtcagcagccatcagaagcttgaagaagagcgatct
gcccttaataatcagctactagaaatgaaaaagagcttgcccaataatactttaagagag
tctttattaaagaaaggatccaatgaggaaaaggcttccttagagaaatccatccaaaaa
actagtgccttgatctccgaaaaggacaaagaattggagaagctcagaaatgagattaca
gtgttgcgaggagagaatgccaagactaagacactgcagtctgcagtgcagtccctggaa
acagacaaagccaaactgcaagagaaggtgcagaatctggagaagaaactcactgaaaac
aagagggacaacaacactggctcaccgggagacgctcatcttgagcagctaagagaagac
agggagtctgcagagagccaacaggatatgcttgacttcctcaattcagtgattatagat
ctgcagaggaaaaatgaagagctgaagagcaaactggagaaaatggcagaagcgtctctc
aacggcaataatgccagtgaactggacaactatgacagtttcaatgaaacccaggagaag
aagaagaaacctgcccctcgtctcttctgtgatatctgcgattgcttcgacctccacgac
acggaggactgccccacgcaagcgcagatgtcagaaactccaccgcacaccgcttaccac
ggcagccggaaggacgagcgtccctactgtgatatctgcgaggtgttcggacacttgacc
aacagctgcaacgacgacgagaccttctag
DBGET
integrated database retrieval system
