Acipenser ruthenus (sterlet): 117427793
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Entry
117427793 CDS
T07327
Name
(RefSeq) retinoblastoma-like protein 1
KO
K04681
retinoblastoma-like protein 1
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04110
Cell cycle
arut04218
Cellular senescence
arut04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117427793
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117427793
04218 Cellular senescence
117427793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arut03000
]
117427793
Transcription factors [BR:
arut03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
117427793
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
Rb_C
Motif
Other DBs
NCBI-GeneID:
117427793
NCBI-ProteinID:
XP_033901990
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Position
24:25720008..25731531
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AA seq
1083 aa
AA seq
DB search
MRGAKSDSDSGSGPESGKDEVTQVRKSLDALCQELNMDEETAAEALQNFTAIWDTYTLEG
DVVHWLACSLYTACRRGSTPTVGKGMMEGNFVSLTRILRSSKLSLIQFFNKMKKWADMSS
LSQEFRERIERLERNFEVSTVIFKKFEPIFLDMFQNPQEEPPKIPRSRKQRRLPCHVSDV
FKFCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLVFGNALLCPNRKDLINPHFKGLPAD
YHNPDYTPPEEPPCIIDRLCELHDGLVVEAKGIKEHYFKPYICKLFERQILKGNDEFFTE
MLDVLHFTDNNKAVNKEYEEYVLTVGDFDERVFLGADADEEIGTPRKSALEFPGGKLSAR
MQVECNLQQHFEKTRSFAPSTPLTGRRYLREKETMVTPVSSATQSVSRLQSMVLGLKNTP
SEQLLQIFSSCSRDPSETILNRVKSLGETFRQHYTKDTDEQPGSHMDFADNRLKLAEILY
YKILENVMAQETRRLHGKDMAVLLEQDIFHHSLLACCLEVVLFAYSSQRTFPWIINVFKL
RPFYFYKVIEVVIRSEEGLSRDMVKHLNSIEEQILESRAWSQDSALWECLRAAQNKVPTC
EEVTFPSNFESGNGSGGLSHLPMAPLSPVIHPRLKEVRTDLGGSVRRDVPPSPISVHDRY
SSPMAGSAKRRLFGEDPSSGYPVSKISFSQGGALKIIHTPSSPRDAAPLPPGCTLVTMAT
ATVTTTNGQKVMIPVKGVANETGGITFIPVGVNAADQQKGVDSSSPTPLSAQALLGASPT
RSRGAAAQEAQPASSKPKKTGSLALFFRKVYHLASVRLRDLCLKLDMSSELRRKIWTCFE
FSLVHCTDLMKDRHLDQLLLCAVYILAKVTKEERSFQDIMKCYRSQPQATSHVYRSVLLK
KAAKQPQPDANNAEGHEETMECEVESKEGSPTDNRIDPADDRGDLIQFYNSVYVLRMKSF
ALKYAITNLDHRMEAPPLSPFPSVKSLPLSPRRISQRHSIYVSPHKNGSCLTPVSAMTYR
FNGSPSKDLRDINNMIKQGERMSKKRAFTMDSDSESPAKRLCQESDDVLLKRLQDVVSER
ANH
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcgctaaaagcgattccgattccggatctggacccgagtcgggaaaggatgag
gtgacacaggttcggaaaagtttagatgcgctgtgccaagagttgaatatggacgaggag
acagcggctgaagccttgcaaaatttcacagcgatctgggacacatacactctggaggga
gacgtggttcactggctggcctgctcgttgtacactgcttgccgcagaggctccacccct
acagtggggaagggcatgatggaggggaactttgtgtctctgaccagaattctgcgctct
tcaaaattaagtttaatccagttcttcaataagatgaagaagtgggcggacatgtccagt
ttgtcgcaggagtttcgagaacgaattgagcgcctggagagaaacttcgaagtgtccacg
gtcatttttaagaagtttgagccgatttttctggacatgtttcaaaacccccaggaagag
cccccaaagatcccgcggagcagaaaacagagacgccttccctgccatgtcagcgatgtc
tttaaattctgctggaccctgtttgtgtatacgaaaggtaacttccgcatgatcggtgat
gatttggtcaattcgtatcatcttctgctttgctgcctggacttggttttcggtaacgcg
ttgctgtgtccgaacaggaaggatctcatcaatcctcattttaaaggattgccagcggat
taccacaaccctgactacactccccctgaggagcctccctgcatcattgaccggctgtgt
gaactgcatgacgggctggtggtggaagccaagggcataaaggagcactactttaaaccc
tacatctgcaagctgttcgagagacagattttaaaaggaaacgatgagtttttcacagaa
atgttggacgttctgcatttcacagacaacaacaaagcggtcaacaaggagtatgaagag
tacgttctgacagtgggggatttcgacgagagggtgtttttgggagccgatgctgatgag
gagatcggaactcctcggaagtctgctctggaattccctggagggaagctgtctgcgagg
atgcaggtggaatgcaaccttcagcagcattttgaaaagacgcggtcttttgcaccctcg
actccattgacaggacgccggtacctgagagagaaggagaccatggtgacgcctgtttcc
tcggcaacacagagtgtcagccgcttgcaaagcatggtgctggggctgaagaacactccc
agcgagcagctgctgcagatcttcagctcttgttcccgggaccccagcgaaaccatttta
aacagagtaaagagcctgggagagactttccgtcaacactatacaaaagacacagacgag
cagcccggctctcatatggactttgctgacaacagattgaagctagccgagatcctttat
tataaaattcttgagaatgtcatggcgcaggaaacccgaagactgcatggcaaagacatg
gcagtgttgctggagcaggatatatttcaccactctctgctggcttgctgtctggaggtt
gtcctttttgcatacagctctcagcgcactttcccctggatcatcaatgtcttcaagctc
agacctttctacttctataaggttatagaggttgtgatccgatccgaggaggggctgtcc
cgggacatggtgaagcatctgaacagcatcgaggagcagatcctggagagccgtgcctgg
agccaggactctgcgctgtgggagtgtctgagagcggcacagaacaaagtgcctacctgt
gaggaggtgacctttcctagcaattttgaaagtggaaacggcagcgggggtttgtctcac
ctgcccatggcgcccctttctccagtcattcaccctcgtcttaaagaagtgcggactgac
ctgggtgggagcgtgagacgagatgtcccgccttcacccatttcggtgcacgatcgctac
agctccccaatggctggcagtgccaagaggcgtctgtttggagaggacccctcctcggga
tacccggtgagcaagatctccttctctcagggcggggcgctgaagatcatccacaccccc
tcctcccctagagacgctgctcctctcccccctgggtgcacactggtgactatggcaaca
gcgacggtaaccacgacaaatgggcagaaggtcatgatacctgtgaaaggtgtggcgaat
gagacggggggcatcaccttcatacccgtgggggtgaacgctgctgaccagcagaagggt
gttgacagcagcagcccgaccccgctctctgctcaagcactgctcggcgcgtctccgaca
cgctctcgtggggccgcagcacaagaggctcagccagcgtccagcaagcccaagaagact
ggctctctggcgctgttcttcagaaaggtttatcacttggcgagtgtgcggctgagggac
ctgtgtctgaagctggatatgtcttcagagttaagaaggaagatctggacctgctttgag
ttctccctcgtccactgcactgacctaatgaaggacagacacctggaccagttactgctc
tgtgccgtctacatactggcaaaggtcacaaaagaagagcgatcattccaggatataatg
aaatgttaccggagtcagccacaggccaccagtcacgtgtataggagcgttctgttgaag
aaagcagccaaacagccacagcctgatgccaacaatgctgaggggcatgaagagacgatg
gagtgtgaagttgaaagtaaagaaggttccccgacagacaatcgcattgatccagcagat
gacagaggcgacctcatccaattctacaattcagtatacgtgctgcgaatgaaatcattt
gcattgaagtacgccatcactaacctggaccataggatggaggctccccccttgtctccg
ttcccatctgttaaatccctcccgctgtctcctcgccgtatatcacagagacactctatc
tatgtgtctccacacaagaatgggtcctgtctcacccccgtctctgccatgacctacagg
tttaacggcagcccttcaaaggatctgcgagatatcaacaacatgatcaagcagggagag
cggatgagcaagaaacgagcttttactatggacagcgactctgaatcgccggctaaacgg
ctgtgtcaggaaagcgacgatgtcctactgaagcggctgcaggatgttgtgagcgagagg
gccaatcactga
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