Acipenser ruthenus (sterlet): 117427828
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Entry
117427828 CDS
T07327
Name
(RefSeq) hepatocyte nuclear factor 1-alpha-like
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arut03000
]
117427828
Transcription factors [BR:
arut03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
117427828
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
117427828
NCBI-ProteinID:
XP_033902051
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Position
19:27310627..27320145
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AA seq
613 aa
AA seq
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MGQSKRRLSEIVMVTRLTTLQQELLSALLGSGLSKQTLLEALGEMEACRPPQAEESPLEE
GEDEPRLGGGVEDSSEEEGEEFTPPIFKELEALSPEEASRQRALVDRFLQQDSWHVAKIV
KSYMQQHNLPQREVVDSTGLNQSHLSQHLNKGTPMKSQKRAALYTWYVRKQGEINQQFTN
ASRGLLGEDPSEELTNKKVRRNRFKWGPASQQILFQAYERQKNPSKEEREALVEECNRAE
CIQRGVSPSQVHGLGSNLVTEVRVYNWFANRRKEEAFRHKLAMDSYGSQPPPPHSAASGS
GAGAHNSNPLNTTGLSASPAHGVRYSEQQANEGLTCSISHHGNSGMVTTQSILQSVSPPG
LEPSHSLLSNDCKLVSTAGGTLPPVSTLTALHGLLPHSAHTHPQTQGLIMASLPSVMTIG
PGESSFVIGLASTQSQNIPVLNSVGGGLTALQPVQFQQQLHHGHQQPIMQQFQSHMAQNS
FMATMAQFQSPHMYSHKSELPQYAPTSLFPQTMVITDTGNLSTLTSLTAVKQILTSDPDS
QSNTPTHTPMSHSQDGTLHLLQGSPPVAVSSAGSLVMYQTQQGNESHPHLLHPPQGTIET
FIAAQMTSSSSSQ
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgggacagagcaagaggaggctgagtgagatcgtcatggtcacccgcttgaccaccttg
cagcaggagctgctgagcgctttgctggggtcggggttgagcaagcagaccctgctggag
gctctgggggagatggaagcctgcaggcccccccaggccgaggagagccccctggaggag
ggggaggatgagccgcggctgggggggggggtggaggacagctcggaggaggagggggag
gagtttaccccccctatattcaaggagctggaggccctgagcccggaggaagcaagccga
cagagagccttggtggacaggttcttacagcaggactcgtggcacgtggctaagatagtg
aagagctacatgcagcagcacaacctcccccagagagaggtagtggattccaccggactg
aaccagtcccacctctcccagcacctcaacaagggcactcccatgaagagccagaagagg
gcagcactgtacacctggtacgtgcgcaagcagggagagatcaaccagcaattcaccaat
gccagccggggactgctgggggaggaccccagcgaggagctgaccaataagaaggtgcgg
aggaaccggttcaagtggggccccgcctcccagcagattctcttccaggcctacgagaga
cagaagaacccgagcaaagaggagagggaggcgctggtggaagagtgcaacagggcggag
tgtatccagcgtggtgtgtccccctctcaggttcacgggctgggctctaacctggtcacg
gaggtgcgggtgtataactggttcgctaaccggcgcaaagaggaggcgttccgtcacaaa
ctggccatggactcgtacgggagccagcccccccctccccacagcgcagcctccgggagc
ggggctggagcacacaacagcaaccccctcaacactaccgggctctcagccagtcctgca
cacggagtaaggtacagcgaacaacaggccaacgaggggctgacatgcagcatcagtcac
catggaaacagcggcatggtaaccacacagtctatactgcagtctgtgtctcctcccggc
ctagagcccagccacagcctgctgagcaacgactgcaaactggtgtcaactgcaggaggg
accctgcccccagtcagcaccctgactgcactgcacggcctgctcccccactccgctcac
acacacccccagacccaggggctcatcatggcctcgctgcccagcgtcatgaccatcggc
ccgggggagtcctccttcgtcatcggtctcgcctccacgcagtctcagaatatccccgtc
ctcaacagcgtggggggcgggctcacagctctccagccagtgcagttccagcagcagctg
caccacggacaccagcagccaatcatgcagcagtttcagagtcacatggcccagaactcc
ttcatggccaccatggcgcagtttcagtccccgcacatgtacagccacaagtcagagctg
ccccagtacgcccccaccagcctcttccctcagaccatggtgatcacagacacagggaac
ctcagcactctcaccagcctgaccgccgtcaaacagattctgacctcggatcccgacagc
cagtcgaatactccgacccacacgcctatgtcgcactcccaggacgggaccctccacctc
ctgcagggcagcccacctgtggcagtgtcctctgcaggcagcctggtgatgtatcaaacc
caacagggcaacgagagtcacccccacctcctgcaccccccccagggcaccatagagacc
ttcatcgctgcgcagatgacctcctcctcctcctcacagtag
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