Acipenser ruthenus (sterlet): 117427831
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Entry
117427831 CDS
T07327
Name
(RefSeq) GATOR complex protein DEPDC5-like isoform X1
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
117427831
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arut04131
]
117427831
Membrane trafficking [BR:
arut04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
117427831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
FGGY_N
Motif
Other DBs
NCBI-GeneID:
117427831
NCBI-ProteinID:
XP_034757427
LinkDB
All DBs
Position
19:27394561..27422510
Genome browser
AA seq
1602 aa
AA seq
DB search
MRTNKVYKLVIHKKGFGGSDDELMMNPKVFPQVKLGDIVEIAHPNDEYSPLLLQVKSLKE
DLQKETISVDQTVAQAFKLRPYQDVYVNGVHPEDVTLDLVELTFKDQYIGRGDMWRLKQS
LVSTCAYITQKVEFAGIRAQASELWVKGEKVTCGYISEETRVVFRSTSAMVYIFIQMSCE
MWDFDIYGDLYFEKAVNGFLSDLFAKWKDKNCSHEVTVVLFSRTFYEAKTTEEFPEAHRS
SIRQDHEGRFYEDFYRVVAQNERREEWTTLLVTIKKLFIQYPVLVRLKVAGGFPSGHNST
AAEGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQRMIDN
GIGVDLVCMGEQPLHAVPLFKLHNRTVPGDSRLGDDYNLPHWINHSFYTSKSQQSCNYFT
PRIKLAGKKVPVEKGKNGKDQALAAPKESENNLPIQVDYDAYDAQVFRLPGPSRAQRSTN
FRTVRDREASTRKSSSSCDVSSSPPQPGKPLPLEEVRSQASDDSLGKISNILLIPRLHQH
QYEVSSSLGYTSTRDILERMMDAQTRDSSAPGRFHVGSAESMLHVRPGGYTPQRALINPF
APSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMAELQGSDLRDPTQSSAELLEL
AYHEATGRRTAVRQQVESGPYPGCGGMDEFTSSPASSHSTGTPVNRGSSFEDSTSSSPDP
ILMLSAPPVVPSFCCTVGVDWKSLTTPACLPLTTDYFPDRQSLQNDYTQGCYDLLPESNL
DRRDEEEALMTAQQVFEEFICQRLMQGYQIIVQPKNKKAAPSAGPPLSSSPLYTRGLVSR
NKPEEEEDQYWLSMGRTFHKVCLKDKIITVTRYLPKYPCESAQIQYSYSLCPSHSNAEFL
PCWVEFSHERLEEYKWNYLDQYICSSGSEDFSLIDSLKFWRTRFLLLPACITATKRIMEG
EARCDIYGERPRSDDEEWQLLDGFIRFIEGLNRIRRRHRSDRMIRKGAAIKGLQVTGPIA
AYPSEPPGPPLGKKGTSALSALLEMEANQKSLEEYQAAMLSAKSSAQLSDTAGVAMTPTY
MDSPRKDGAFFLEFVRSPRNTSIYHPQILADQSAAAGNATESGSAVQSGERSSLAGSVQN
CQNTGEQGAAWTSAGEGSAQPSSGVSRSLTSSSTLAEILEAMKHPTTGVQLLPEQKGLPA
HCFISAEVVHWLVNNVEGVHTQAMAIDIMQKMLDDQVIVHASGEAMRTFVYGFHFYRIVM
DRDPDRVQGIQPSTIWYTAAMEDFALFQRKWFEVAFVLEERLHSEIPVFFLPWLPSRPAS
YASRHSSFSRSFGGRSQAAALLAATVPEQKTVTLDVDVNNRSDRMEWCSCYYHGNFSLSA
AFEVKLHWMAVTAAVLFEMVQGWHRKATSCGFLLVPVLEVPFALPSYLYGDPLRAQLFIP
LAIGCLVKEGSEHLFEGFEPETYWDRMQLFQEAILYRFGFVQDKFSASAFNFPSENKPQY
IHVTGTVFLQLPYSKRKYNTGQQRRRRNSTSSSNQSLFGEEKIGYNWAYNTMLTKTWRSG
ATGDERLADRLLRDFTDFCANKDNRLVSFWESCLEKMNASAP
NT seq
4809 nt
NT seq
+upstream
nt +downstream
nt
atgcggaccaacaaggtttacaagctcgtgattcacaagaaggggttcggaggcagcgat
gacgagttgatgatgaaccccaaggtgtttcctcaggtcaagcttggggatattgttgag
attgcacatcccaacgatgaatacagtccgctcttgctgcaagtaaagtctctcaaggaa
gatcttcagaaagagaccatcagcgttgaccagaccgtggcccaggcgttcaaactaaga
ccgtatcaggatgtctacgttaacggagttcatccagaggatgtgacccttgacctcgtg
gagctgacctttaaagaccagtacatcggcagaggagacatgtggcgcctaaagcagagc
ctggtcagcacgtgtgcctacatcacacagaaagtggagtttgctggaatcagagcgcaa
gctagcgagttgtgggtgaaaggtgaaaaggtgacatgtggctacataagtgaagagacc
agggttgtgttccgctccacctcagccatggtctatatcttcatccagatgagctgtgag
atgtgggactttgacatctacggcgatctgtattttgaaaaagctgtcaatggcttcctg
tcagacctgtttgctaagtggaaggataagaactgcagccatgaagtgacggtggtcctt
ttctccaggaccttctatgaagcaaagaccacagaggagttccctgaggcccatcgctcc
tccattcggcaggatcatgaaggcaggttctatgaggatttttacagggttgtggctcag
aacgagagacgggaggagtggacaacgctgctagtgaccattaaaaagctgtttatccag
tacccagtactggtgcgactcaaggtagcaggtggctttcccagcggacacaactccact
gcagcagaaggaaactacttggaggccatcaacctctcctttaacgtgtttgataagcat
tacatcaaccggaacttcgaccgcactggccagatgtctgtggtgatcacgcctggggtg
ggcgtgttcgaggtggacaggctcctcatgatcctcaccaagcagcgcatgatcgacaac
gggatcggtgtcgacctggtctgcatgggggagcaacctctgcatgcagtcccactcttc
aagctacacaaccgcactgttcccggagactcgcgcctgggagacgactacaatctgcct
cactggataaaccacagtttctacacgtcgaagagccagcagtcttgtaactacttcacc
ccgagaatcaagctggctggaaagaaggtcccagttgaaaaaggcaaaaacggcaaagac
caggctctcgctgctcccaaggagtcggagaacaacctccctatccaggtggattacgat
gcgtacgacgcccaggtgttcagactgccaggcccgtctcgagcacagcggagcaccaac
ttcaggacggtgcgtgatcgggaggccagcacccggaagagctcgagctcgtgtgacgtg
tcgagcagccccccccagcccggcaagcccctgcccctggaggaggtgcgcagccaggcc
tccgacgacagcctgggcaagatctccaacatcctgctcatcccccggctccaccagcac
cagtatgaggtcagcagctcgctgggctacaccagcacacgagatatcctggagaggatg
atggacgctcagactcgagactccagcgctccgggccggttccacgtgggcagtgccgag
tccatgctgcacgtgcggccggggggctacaccccacagcgcgccctcatcaaccccttc
gccccctcgcgcatgcccatgaagctcacctccaatcggaggaggtggatgcacaccttc
ccagtgggcccctccggagaggcaattcagatccatcaccagacccggcagaacatggcg
gagctgcaggggagcgacctgcgagaccccacccagtcctccgcagagctgctggaactg
gcctatcacgaagccaccggcagacgcactgccgttcgtcagcaggtggagagcggcccg
tacccgggatgtggagggatggacgagttcaccagcagcccagccagcagccacagcacc
gggacgcctgtaaaccggggatcctctttcgaagactcgacgtccagcagccctgaccca
attctgatgctgtctgctccccctgtagtgcccagtttctgttgcacagtgggggtagac
tggaagtctctgaccacaccggcctgtctacccctcaccaccgattacttcccggacaga
cagagcctccagaacgactacacccagggctgctacgatctgctcccggagtccaacctc
gacaggagagatgaggaggaggctctgatgacagcccagcaggtgtttgaggagtttatc
tgccagcggctcatgcaggggtaccagatcattgtgcagcccaagaacaagaaggcagcc
ccctccgcgggacccccgctcagcagcagcccgctgtacacccgagggctggtgtcccgt
aacaagcccgaggaagaggaggaccagtactggctgagcatgggccggaccttccacaag
gtgtgcctgaaggacaagatcatcactgtcaccagatacctgcccaagtacccttgcgag
tcggctcagattcagtacagctacagcctgtgcccctcgcactccaacgcagagttcctg
ccctgctgggtggagttctctcacgagaggctggaggagtacaagtggaactacctggac
cagtacatctgctcatctggctctgaggacttcagcctcatcgactccctgaagttctgg
cgcacgaggttcctgctgctgcccgcctgcatcacggccacgaagcgcatcatggagggc
gaggcccgctgcgacatctacggggagcgcccgcgcagcgacgacgaggagtggcagctg
ctggacggcttcatccgattcatcgaggggctgaacagaatccgccgccgccaccgatcc
gacaggatgatccgcaagggggctgctatcaagggtctgcaggtgacgggtcccatcgct
gcgtacccctcggagccccccggaccgccgctagggaagaagggcacatcggcgctgtct
gcactgctggagatggaggccaatcagaagagcctggaggagtatcaggcagcgatgctg
tcagcgaagagctctgcacagctgagtgacaccgcgggggttgccatgacacccacttac
atggacagccccaggaaggacggagcgttctttctggagttcgtccgcagccctcgcaat
acctccatctaccacccccagatcttggcggatcagtcggcggccgcaggcaatgcaacg
gagagcggctctgcggtccagtcgggggagagatccagcttggctgggagtgtgcagaac
tgccagaacacaggggagcagggagcagcctggaccagcgccggagagggcagtgctcag
ccctcttctggagtctccagatcactgacgtcctcttcaacgctggctgagattttggag
gccatgaagcatccaaccactggagtccagcttctccctgagcagaagggcctccctgcc
cattgcttcatcagtgcggaggtggtgcactggctggtcaacaacgtggaaggagtgcat
acacaggccatggccatcgatataatgcagaaaatgctggatgaccaggtgatcgtgcac
gcctccggcgaggccatgcgcacgtttgtgtatggattccacttctacaggatcgtcatg
gacagagacccagacagagtccaggggatccagccgtccacgatctggtacacggctgcc
atggaggacttcgccctgttccagaggaagtggtttgaggtggcttttgttctggaggag
aggctgcactctgaaatccccgtgttcttccttccgtggctgcccagccggcccgcgtcc
tatgcaagtaggcacagttccttcagccgcagtttcggaggacggagccaggcagctgct
ttattagctgccacggtgccggagcagaagaccgtgactctggacgtggacgtgaataac
cgcagcgaccgcatggagtggtgcagctgctactaccatgggaacttctccctgagcgct
gccttcgaggtgaagctgcactggatggccgtcacggcagctgtgctcttcgagatggtc
caaggctggcaccggaaggccacctcttgcggattcctgctggtcccggtcctcgaggtg
cccttcgcgctgcccagctacctgtacggggacccgctgcgcgcccagctcttcatcccc
ctcgccatcggctgcctggtcaaggagggcagcgagcacctgttcgagggatttgaacct
gaaacatactgggacagaatgcagcttttccaagaggctattctctacagattcggtttt
gtgcaggacaagttctcggcttctgctttcaacttcccctctgagaacaagcctcagtac
atccatgtgacaggcaccgtgttcctgcagctgccctactccaagaggaagtacaacaca
gggcaacagaggcgcagacgcaactccaccagctcctccaaccagagcctgttcggagag
gagaagatcggctacaactgggcgtacaacaccatgctgaccaagacctggcgctccggg
gccaccggagacgagaggctggccgaccggctgctcagggatttcaccgacttctgcgcc
aacaaggacaaccgtctcgtcagcttctgggagagctgcctggagaagatgaacgccagc
gccccctga
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integrated database retrieval system
