Acipenser ruthenus (sterlet): 117427842
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Entry
117427842 CDS
T07327
Name
(RefSeq) rab5 GDP/GTP exchange factor-like isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117427842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arut04131
]
117427842
Membrane trafficking [BR:
arut04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
117427842
Protein recycling
Other Rab GTPase associated proteins
117427842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
zf-A20
DUF5601
Myelin_MBP
CEP104-like_TOG
Dyp_perox_N
Motif
Other DBs
NCBI-GeneID:
117427842
NCBI-ProteinID:
XP_033902075
LinkDB
All DBs
Position
19:21492863..21503014
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AA seq
440 aa
AA seq
DB search
MIMWEAHRGIHVDQSELLCKEGCGYYGNPAWQGYCSKCWRKRNRSQPDQKRDTGPCPSVE
GGKPLTFSKFEEKKSSEISRRVNTMKRLFGGSRTPPKRGSEPSDTQSVTSSAPQKSQPVD
FTEFLKSLRKPSTQVLHRRCTAFLSNLESQRYLPVQKQSDLVQDFYQSIAGHFHSFPEEQ
SAPMMEHIEKLIMTRLYKWVFCPDSSDDEHRDLTLQRRIRALHWVTPQMLRVPVGEGRSE
VNDHFLSAITAIIGMDAKRAPQDKLSCVFKCSQSIFTALASSNPEPANVDDFLSGLIHVV
LKANPPRLHSNMQYIIRFGLPHSLMAGESGYYFTNLCCAVTFIEKLNGLSLNLSPEQFEG
YMQGRKPEERESPVSEPESEGLRLAKKNRELLGEIEKRQERVALGMREMEEELGKWVQSV
HAQVQEIKAKALLDVISTKS
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgataatgtgggaggcgcacagagggatccatgttgaccaatcagagctgctgtgcaaa
gagggctgtggttactatggtaacccagcatggcaggggtactgctccaaatgttggcgg
aagaggaacaggagtcaacctgaccagaagagagacactggaccttgtcccagtgtggaa
ggggggaagcccctgaccttctccaagtttgaggagaagaagagcagtgagataagccgg
cgtgtcaacaccatgaagagactctttgggggctccagaactccccccaagagagggagc
gaaccgtctgacacccagtcagtcacctcatcagcacctcagaaatcacaacccgtggac
ttcactgaatttctgaagtccctgcgtaaaccctccacgcaggtcctacaccgccgctgc
acagccttcctcagcaacctggagtcacagcggtaccttccagtacagaagcagtcagac
ctggtccaggatttctaccagagcatcgcaggacactttcacagcttcccagaggagcag
agtgccccgatgatggagcacatcgagaagctgatcatgacgcggctgtataagtgggtg
ttctgtccagacagctcggacgatgagcacagagacctgactctgcagaggaggatacga
gctcttcactgggtcaccccacagatgcttcgtgtcccagttggcgagggtcgctctgag
gtcaatgaccacttcctctcggccatcacagcaataatcgggatggacgctaagcgtgcc
cctcaggataagctctcctgtgtgttcaagtgcagccagagtatcttcactgccctggcc
tcctccaaccctgagccggccaacgtagacgacttcctgtcagggctgatccacgtggtg
ctgaaggccaaccctccccgtctgcactccaacatgcagtacatcatccgcttcggtctg
ccgcacagcctcatggccggggaatccggatactacttcaccaacctgtgctgcgctgtc
accttcattgagaagctgaacgggctgtctctgaacctgagcccggagcagtttgagggg
tacatgcagggcaggaagccggaggagcgggagagcccggtgtcggagccagagtcggag
ggtctgcggctggctaagaagaaccgggagctgctgggggagattgagaagcgacaggag
cgggtggcactggggatgcgagagatggaggaggagctgggaaagtgggtgcagtctgtg
catgctcaggtgcaggagatcaaggcaaaggctcttctggatgttatcagcacaaagagt
tag
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