Acipenser ruthenus (sterlet): 117428002
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Entry
117428002 CDS
T07327
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03030
DNA replication
arut03410
Base excision repair
arut03420
Nucleotide excision repair
arut03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117428002
03410 Base excision repair
117428002
03420 Nucleotide excision repair
117428002
03430 Mismatch repair
117428002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
arut03032
]
117428002
03036 Chromosome and associated proteins [BR:
arut03036
]
117428002
03400 DNA repair and recombination proteins [BR:
arut03400
]
117428002
DNA replication proteins [BR:
arut03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
117428002
DNA Replication Termination Factors
ELG1-RFC complex
117428002
Chromosome and associated proteins [BR:
arut03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
117428002
DNA repair and recombination proteins [BR:
arut03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
117428002
Check point factors
HRAD17(Rad24)-RFC complex
117428002
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_11
AAA_22
AAA_14
AAA_lid_RFC1
RuvB_N
AAA_assoc_2
ResIII
DEAD
AAA_16
DUF815
PhoH
AAA_7
AAA_24
ATPase_2
AAA_19
AAA_5
TIP49
AAA_30
nSTAND_NTPase5
Thioredoxin_6
nSTAND3
DNAX_ATPase_lid
AAA_2
bpMoxR
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
117428002
NCBI-ProteinID:
XP_033902382
LinkDB
All DBs
Position
19:26767009..26775481
Genome browser
AA seq
334 aa
AA seq
DB search
MTSTCKSQLQSRNLPWVEKYRPQTLQDLISHQDILGTIQRFISEERLPHLLFYGPPGTGK
TSTILACAKQLYKEKEFNSMVLELNASDDRGIDVVRGPILSFSSTRTIFNRGFKLVILDE
ADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLSQEQMVPRL
EYVIEQESVDVTPDGMKAIVTLSNGDMRRSLNILQSTNMAYGKVSEDTVYTCTGHPLKSD
IANILDWMLNKDFAAAYNNIMELKTLKGLALHDILTEIHLLVHRVDFPASVRIHLLIKMA
NIEHRLASGTSEKIQLSSMIAAFQVARDMVAAEA
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaacttgcaaaagccagctgcagtcgaggaaccttccgtgggtggaaaagtat
cgaccgcagacgctgcaggacttgatttcgcatcaggacattctgggaacaattcagcgc
tttatcagtgaagagaggctccctcatctcctgttttatgggcctcccgggactgggaag
acctctaccatcctggcttgtgccaagcagctctacaaggagaaagaattcaactccatg
gtcctggagctcaatgcatcagatgacagaggtattgatgttgttcggggtccgatcctc
agcttctccagcaccaggaccatctttaatagaggatttaaactagttatattggatgaa
gcagacgccatgacccaggatgctcagaatgctttgagaagagtgattgagaagttcaca
gagaacaccaggttttgcttgatctgtaactacttgtcaaagatcattcccgcactgcag
tctcgatgcacgaggttccggttcggccccctgtcccaggagcagatggtgcccaggctg
gaatatgttatagagcaggaaagtgttgatgtaacccccgatggaatgaaggccattgtg
accctgtctaatggtgacatgcgtcgatctctcaacattttacagagtaccaacatggct
tatggaaaagtgagtgaggataccgtgtacacgtgcacaggtcaccctctgaagtcggac
attgctaacattctggactggatgctgaacaaggatttcgccgcggcgtacaataacatc
atggagcttaaaacattgaagggtttggcgttgcatgacatcctgacagagatccaccta
ttggtacacagagttgattttccagcttcagttcgaatccatttactcatcaagatggca
aacattgagcacagactggcttctgggacgagtgagaagatccagctgagctccatgatc
gcagcgtttcaggtggcccgggacatggtggcagctgaagcctga
DBGET
integrated database retrieval system