Acipenser ruthenus (sterlet): 117428105
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Entry
117428105 CDS
T07327
Name
(RefSeq) protein strawberry notch homolog 1 isoform X1
KO
K26273
protein strawberry notch
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
arut03036
]
117428105
Chromosome and associated proteins [BR:
arut03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
117428105
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
RESC11
Motif
Other DBs
NCBI-GeneID:
117428105
NCBI-ProteinID:
XP_034757962
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All DBs
Position
19:24265061..24281372
Genome browser
AA seq
1400 aa
AA seq
DB search
MMMDPGQDLLLAALSESGISPNDLFDIGPLDAGLGAPLPSAGNQQSVPISALEQDLGAVT
VKQGPALPPTPTVTVRKPQPSTTTFVLNQLNQLPSLGTIVVTKPSGTTSRQTITMAKIVH
TSATTRPSYTSPVMRTTLTTPGKDQIQLKDLLRSSSLNELMKLKPPSNIAQPVATAAKII
VLSTKMLNKPADLNGVKKEVSNKDVARIWINDDIKMRSFSPTNKIPGIKEEEEPDEEDEE
ELGHAETYAEYMPMKLKVGLRHPDPVVETSSLSSVSPPDVWYRLSLSEEIIDRGWLSALQ
LEAITYTAQQHETFLPNGDRAAYLIGDGAGVGKGRTIAGIIYENYILGRKRALWFSVSND
LKYDAERDLRDIGAKNIQVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGESQSGGKY
KTRFKQLLHWCGEDFDGVIVFDECHKAKNVCPIGNSKPTKTGLAVLELQNKLPKARVVYA
SATGASEPRNMAYMNRLGIWGEGTPFKEFSNFIQAVERRGVGAMEIVAMDMKLRGMYIAR
QLSFSGVTFKIEEVPLTQDYVKMYNKAVRLWVAAREKFQLAANLMDAEQRMKKSMWGQFW
SAHQRFFKYLCIASKVKRVVQLAREEIKNGKCVVIGLQSTGEARTLEALEEGGGELNDFV
STAKGVLQSLVEKHFPAPDRQKLFSLLGIDLSAKKTPSPNDCASTDNKGKKRKGQDTKKE
AKKPRKSGGLGGSSSDESDSDSASAKEAESDNDSFKSVSSGEDDEDDFNPFRDESSEDDE
DDPWLIRKDHKKTKDKKNKKKKKNIDPDSIHSALLASGLGSKRPAFSTPVANTTSSAPSI
AKKDSESSSCVTSQDAVENAQQMKRELLDKLEKLAEELPPNTLDELIDELGGPDNVAEMT
GRKGRVVSNDDGSISYESRSELDVPVEILNITEKQRFMDGEKNIAIISEAASSGISLQAD
RRVKNQRRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRFASIVAK
RLESLGALTHGDRRATESRDLSRFNFDNKYGRSALEIVMKSIVNLDSPIVSPPANFDGDF
FKEIRHGLIGVGLINVEDRSGILMLDKDYNNIGKFLNRILGMEVQQQNALFQYFSDTLSA
VIQNAKKNGRYDMGILDLGSGDEKVRKVESKKFLTPGYSTSGHVELYTVSVERGMSWEDS
TRVWAEQSGPDDGFYIQIRNNKKTAILVKEVNAKKRLFLVYRPNTGKQLKLEIYADIRKK
CKKVLSEDAKQHWIEQYNSSADTCSHAYWRGNCKKASVGLQCEIGLRCRTYFVLCGSVLS
VWTKVEGVLASVSGTNVKMQIVRLRTEDGQRIVGLIIPANCVAPLMNILSSSDQSQQLAV
QQQQMWQQLHPQSINHFSNT
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggatccaggtcaagacctgttacttgctgctctgagcgagagtggaatcagt
ccaaatgatctctttgatattggtccactggatgctggattgggggctcccttgccatct
gctggtaatcaacagtcagtaccaattagtgcattggaacaagacttgggagcagtaaca
gtgaagcagggaccagctcttccacctactccaactgtgactgttaggaagccacaaccc
tccaccacaacgttcgtcttgaatcagctgaatcagctcccatccctgggaacaatagtt
gtgaccaagccttctggcacaacatccagacagactatcaccatggcaaaaattgttcac
acctctgcgacaacgcggccatcctacacaagtccagtaatgcgcactacactgaccaca
cctggcaaggaccagattcaactaaaagacctccttagaagcagcagtctcaatgaactg
atgaaactgaagccaccttcaaatattgctcagccagtagcaacagctgccaagatcatt
gtgctctcaacaaagatgttaaataaaccagctgatctaaatggtgtaaagaaggaagtc
tcaaacaaagatgttgcacgaatttggattaatgatgatattaaaatgcggagcttttcg
cctactaacaaaataccaggaataaaagaagaggaggagccagatgaggaggatgaggag
gagcttggccatgcagaaacctatgctgaatacatgccaatgaaattgaaagttggtctg
cgtcatcctgacccagtcgttgagacaagttcattgtccagtgtttctccacctgatgtg
tggtacaggttgtctttatctgaggagatcattgatagaggatggctttcagcattgcag
cttgaagcaattacatacacagcacagcaacatgaaacgttccttccaaatggagacaga
gctgcctatttaataggcgatggagctggtgtagggaaagggagaaccattgcaggcatc
atttacgagaattacattttgggcaggaaaagggcactctggtttagtgtttccaatgac
ttgaagtatgatgctgaaagagatttgagagacattggagccaaaaatatccaggtccat
tcactgaataagtttaaatatgggaaaatttcttccaaacacaatggaagtgtgaagaaa
ggtgtaatttttgcaacttactcctctctgattggtgaaagtcagtccggtggaaaatac
aagaccagatttaaacagcttcttcattggtgtggtgaagactttgatggagttattgtg
tttgatgaatgccacaaagcaaaaaatgtatgtccaattgggaattcgaaacctaccaag
actgggttagctgtcttagaactgcaaaacaaactgccaaaagcaagggtggtgtatgct
agtgctacaggtgcctctgagccacggaacatggcatatatgaatcgtcttggaatttgg
ggtgaaggaactccattcaaggagttcagcaatttcattcaagctgtggagagaaggggg
gtaggtgccatggaaattgttgccatggatatgaagctacgtggaatgtacattgcaaga
cagttgagcttttcaggtgtgaccttcaaaatcgaggaagttcctctgacccaagactat
gtcaagatgtataacaaggctgtgcgattgtgggttgcagccagagagaagttccagctg
gcagcaaacctcatggatgcagagcaacggatgaagaagtctatgtggggccagttctgg
tcggcacaccaaaggttcttcaaatatctctgtatagcatcgaaggtgaagagagttgtg
caacttgctcgagaagaaataaaaaacggaaagtgcgtagttattggtcttcagtccact
ggagaagcccgcacactagaagcactggaagagggaggtggggagctaaacgactttgtt
tccacagcaaagggagttctgcagtcccttgtagagaaacatttcccagcacctgacaga
caaaagctgtttagcttattgggaattgatttatctgctaagaaaactccatctcccaat
gactgtgcctctacagacaataagggaaagaaacggaaaggccaagacacaaagaaggaa
gcaaagaagcctcgcaagtctggtgggctcgggggcagcagttctgatgaaagtgacagt
gactctgcttctgcaaaggaagctgaaagtgacaatgacagtttcaagtctgtcagctct
ggggaggatgatgaagatgacttcaatcctttcagagatgaatccagtgaggacgatgaa
gatgatccttggctaataagaaaagatcacaagaaaacaaaagacaagaagaataaaaag
aaaaagaagaatatagatccagattctatccacagtgccttgttggcatctggtcttggc
tcaaaacgaccggctttttcaactccagttgctaacactacaagtagtgcaccttccatc
gcaaaaaaagacagtgaaagtagcagctgtgtaactagccaggatgctgttgaaaatgcc
cagcagatgaaacgagagctgctagacaaactagagaagcttgctgaagagctgcctccc
aacactctcgacgaactgattgatgaacttggaggtccagataatgtggcagagatgact
gggcgtaagggcagagttgtgagcaatgatgacggaagcatatcctatgaatcgagatca
gagcttgatgttccagtggaaatcctgaatatcacagagaaacagaggttcatggatgga
gagaagaacattgccataatatcagaagctgcaagttctggtatctcattgcaagcagac
cggagagttaaaaaccagaggagacgcgtgcacatgactttggagttgccctggagtgct
gatagagccattcagcagtttggacgaacacacagatcaaaccaggtgactgctccagag
tacgtgttcctcatatccgagctagctggagaacagagatttgcatcaattgtggccaaa
aggcttgagagtttgggagcccttacgcatggtgatagaagagccaccgaatccagagac
ctaagcagattcaattttgacaataagtatggtagaagtgctctggaaattgtgatgaag
tccattgtaaacttggattccccaatagtgtcaccccctgctaactttgatggagatttc
tttaaagaaattcgtcatgggttgattggtgttggattaataaatgtggaagatcgttca
ggaatcctcatgttggataaagattataacaacattggcaagttcttgaatcgaattctt
ggcatggaggtccaacaacagaatgcactctttcagtatttctcggacacattaagtgct
gtaattcagaatgccaaaaagaatggtcgatatgatatgggtattttggatcttggctct
ggggatgagaaggtgaggaaagtagaatccaagaaatttcttactccgggatattcaacc
tcaggacatgtggaattgtatacagtaagtgtcgagagaggaatgtcttgggaggattca
accagagtttgggctgaacagtcgggaccagatgatggattttatatacagatcaggaac
aacaaaaagactgcaatccttgttaaggaagttaatgccaaaaagaggttgtttctggtg
tatcgaccaaacacaggaaaacagctcaaactggagatctacgcagacattaggaagaaa
tgcaagaaggtactttctgaagatgccaagcaacattggatagagcagtacaattcatca
gcagacacatgttcccatgcctattggcgaggcaattgcaaaaaggcatctgtaggacta
cagtgtgaaatcggtctacgctgccgaacgtactttgtcctgtgtggttcggtactgagt
gtctggacaaaagttgagggtgttctggcctcagtgagtggaacaaatgtcaaaatgcaa
atagttcggttaagaacagaagatggacagaggattgtgggtttgatcattcctgcaaac
tgcgtggctccattaatgaacatcctttcctcctccgaccagtctcaacagctagcagta
cagcagcagcagatgtggcaacagcttcatccacagagcattaaccacttcagcaacaca
tag
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