Acipenser ruthenus (sterlet): 117428124
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Entry
117428124 CDS
T07327
Name
(RefSeq) clathrin heavy chain 1-like isoform X1
KO
K04646
clathrin heavy chain
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04142
Lysosome
arut04144
Endocytosis
arut05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117428124
04142 Lysosome
117428124
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
117428124
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arut04131
]
117428124
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
arut04147
]
117428124
Membrane trafficking [BR:
arut04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
117428124
Exosome [BR:
arut04147
]
Exosomal proteins
Proteins found in most exosomes
117428124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_PEP5_VPS11
TPR_Vps41
Gp18_dom_I
Motif
Other DBs
NCBI-GeneID:
117428124
NCBI-ProteinID:
XP_033902641
LinkDB
All DBs
Position
19:complement(28617310..28643138)
Genome browser
AA seq
1683 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGVNPANIGFSYLTMESDKFICIREKVGDQAQVVIIDMSDPTN
PIRRPISADSAIMNPTSKVIALKDAAKTLQIFNIEMKSKMKAHTMTEEVMFWKWISVNTV
ALVTETAVYHWSMEGDSQPLKVFDRHASLAGCQIINYRTDEQQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAAAFADFKVEGNAKPSTLFCFAVRSPAGGKLHIIEVGQPAAG
NQPFAKKAVDVFFPPEAQTDFPVAMQIGTKHGVIYLITKYGYIHMYDLESGVCIYMNRIS
AETIFVTAAHEPTSGIIGVNKKGQVLSVCVEEENIVNYATNVLQNPDLGLRMAIRSNLAG
AEELFARKFNTLFTQGNYSEAAKVAASAPKGILRTADTIRKFQGVPAQPGQASPLLQYFG
ILLDQGQLNKFESLELCRPVLGQGRKQLLEKWLKEDKLECSEELGDLVKTADPTLALSVY
LRANVPSKVIQCFAETGQFQKIVLYAKKVGYTPDWVFLLRNVMRVSPDQGLQFSQMLVQD
EEPLANINQIVDVFMENNLVQQCTSFLLDALKNNRPAEGHLQTRLLEMNLVHAPQVADAI
LGNQMFTHYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGALS
VEDSVECLRAMLSANIRQNLQLCVQVASKYHEQLGTQTLVELFESFKSYEGLFYFLGSIV
NFSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPDRVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRLPVVIGGLLDVDCAEDVIKNLIMVVRGQ
FSTDELVAEVEKRNRLKLLLPWLESRIHEACEEPATHNALAKIYIDSNNNPERFLRENTF
YDSCVVGKYCEKRDPHLACVAYERGECDLELIKVCNENSLFKSEARYLVRRKDPELWANV
LEENNPFRRPLIDQVVQTALSETQDPEEVSVSVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNT
SAIQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLQKDLVKEAIDSYIKADDPSAYME
VVQAASKNSNWEDLVKFLQMARKKARESYVETELIFALAKTNRLSELEEFVSGPNNAHIQ
QVGDRCYDDGMYDAAKLLYNNVSNFARLASTLVHLGEYQAAVDSARKASSTRTWKEVCFA
CVDGTEFRLAQICGLHIVIHADELEELISYYQDRGYFEELIALLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMM
NHPSDAWKEGQFKDIIAKVANVELYYKALQFYLDYKPLLINDLLVVLSPRLDHTRAVSFF
AKMNQLQLVKPYLRSVQNHNNKGVNESLNNLLTEEEDYQGLRASIDAYDNFDNISLAQRL
ERHELIEFRRIAAFLYKGNNRWKQSVELCKKDRLYKDAMQYAAESKDTELAENLLQWFLE
EGKRECFASCLFTSYDLLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKVDEIAEKVTV
DKLEDSESLRKTEEEVAEPTPIVFGQQLMLTAGSSPVPPQAGYPAYGYTAPGFASQSAYG
YNM
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatacttccaatacgatttcaggaacatctgcagttgcagaaccttggggtg
aacccagccaacattgggttcagctacctgacaatggagtctgacaagttcatctgtatt
cgggagaaggtaggagaccaggcccaggtggttatcatcgacatgagtgaccctacaaac
ccaatcaggcgtcccatttctgcagacagtgccatcatgaatccgaccagcaaggtcatc
gctttgaaagatgctgcaaaaactctacagatctttaacattgagatgaagagtaaaatg
aaagctcacacaatgacagaagaggtaatgttctggaaatggatctctgtgaacactgtt
gccttggtaacggagacagcggtctatcactggagcatggagggagactcccagccgttg
aaggtgtttgacagacatgccagtttagcaggatgccagatcatcaactaccgaacagac
gagcagcagaaatggctgcttctgatcggaatctctgcacagcaaaaccgtgtggtagga
gccatgcagctgtactctgtagacaggaaagtgtcccagccaatcgaagggcatgcagca
gcatttgctgacttcaaggtcgaggggaatgccaaaccatcaactctcttctgctttgct
gttcgcagtcctgccggaggcaagctgcacattatagaagtaggtcagcctgcagctggg
aaccaaccctttgctaaaaaagctgtggacgttttctttccccctgaggctcagactgac
tttcctgtggcaatgcagattggaaccaagcacggtgttatctatctcattactaagtat
ggctatatacacatgtatgacctggagtctggggtgtgcatctacatgaaccgcatcagc
gcagagactatctttgtcactgccgcgcatgagcccacctctggaatcattggcgtcaat
aagaaaggacaggtgctgtctgtatgtgttgaggaagaaaacattgtgaactacgctacc
aacgtccttcagaacccagaccttggactgcgcatggccatccgcagcaacctggcaggc
gctgaggagctctttgctaggaaattcaacacgctcttcactcaaggaaactactccgag
gctgccaaagtagctgcctctgcaccaaagggaatactgcgtactgccgataccatccgg
aaattccagggtgtcccggcacagcctggccaggcctctcctctgctgcagtacttcggc
atcctgctggatcaagggcagctgaataagtttgagtcgcttgaactgtgccgacccgtt
ctggggcagggccggaagcagcttttagaaaagtggctgaaggaggataagctggagtgt
tcagaagagctgggtgacctggtaaagactgctgacccaaccctggctctcagtgtctac
ttgcgtgccaatgtgcccagcaaggttattcagtgttttgcagaaactggacagtttcag
aaaattgtgctctatgctaaaaaggttggctacacaccagactgggttttcctgctgaga
aacgtgatgcgggtgagccctgaccagggactgcagttctctcagatgctggtccaggac
gaggagcctttagccaacatcaaccagattgtggatgtgttcatggagaacaacctggtt
cagcagtgcacctcattcctattggatgctctgaagaataaccgtcccgctgaaggacat
ctgcagactcgacttctggaaatgaatcttgtacatgcgccacaggtagccgacgccatt
cttggaaaccagatgtttacacactatgaccgtgcccacattgcacagctctgtgagaag
gcaggcctgctgcagcgagccctggagcactacacggacctgtatgatattaaacgtgct
gtcgttcacacccatctcctgaacccggagtggctggtgaacttctttggtgctctgtcg
gtggaagactctgtagaatgcctgcgagccatgctgtctgcgaacatccgccaaaacctg
cagctgtgtgtacaggtggcatccaagtaccacgagcagcttgggactcaaaccctggtg
gaactgtttgagtcctttaagagctatgaaggactgttctatttcctgggctccattgta
aacttcagccaggacccggatgtgcatttcaaatacattcaagcagcctgcaaaacaggc
cagatcaaagaagtggagcggatctgccgggaaagcaactgttacgacccggaccgtgtc
aagaacttccttaaggaagccaagttaactgaccagcttcctctaatcattgtgtgtgat
cggtttgacttcgttcacgacctggttctctacttgtaccgcaacagtctacagaaatac
attgaaatctacgtgcagaaggttaaccctagccgtcttccagtggtcatcggaggcctg
ctggatgtggattgcgctgaagatgtgattaaaaacttgatcatggtggtgaggggacag
ttctcaactgatgagctggtcgctgaagtggagaaaagaaacaggctgaagctgctgctt
ccgtggctggaatcgagaatccatgaagcctgtgaagagcctgccacccacaatgcgctc
gccaaaatctacatcgacagcaacaacaaccccgagcgcttcctgcgcgagaacactttc
tacgacagctgcgtggtcgggaagtactgtgaaaagagggacccgcacctcgcctgtgta
gcctacgaaagaggggagtgtgatctggaactcatcaaggtttgcaatgagaactcacta
ttcaagagtgaggctcgctaccttgtgcgcaggaaggacccagaactctgggcaaatgtt
cttgaagagaacaacccattccgtcgtccgctgattgaccaggttgtgcagacagccctg
tcggagacacaggacccagaggaggtgtctgtctctgtgaaagctttcatgacggctgac
cttcccaatgagctgattgagctgctggagaagattgtcctggataactctgtcttcagt
gagcacagaaacctacagaacctgctgatcctgactgccattaaagctgaccgcacccgg
gttatggagtatataaaccgtctggataactacgatgcgcctgatattgcaaacatcgca
atcagcaatgagctgttcgaggaggcatttgccatcttcagaaagtttgatgtgaacact
tccgctatccaggtcttaatagagcacattgggaatctggaccgtgcctatgagtttgca
gagcgctgtaatgagccagcagtgtggagccagctggccagggcacagctgcagaaagac
ctggtcaaggaagccattgactcctacatcaaggctgatgatccctctgcatacatggaa
gtagtccaagcagccagcaaaaacagcaactgggaggacctggttaaattcctgcagatg
gcccgaaagaaagctagagagtcgtacgtggaaacagaactgatctttgctttagcaaaa
acgaaccgtctctcagaactagaggaatttgttagcgggccaaacaatgctcacatccag
caagttggcgatcgctgttacgatgacgggatgtacgacgcagccaagttgctttacaac
aatgtctctaactttgcccgcctggcctcaacgctggtacacctgggagaataccaggct
gcagtggacagcgcccgcaaggccagcagcaccaggacctggaaggaggtttgctttgcc
tgcgtcgatgggacggagttccgcttggcacagatctgcggcttgcacattgtcatccac
gctgatgagctggaggaattgataagttactatcaggaccgtggatactttgaggagctg
attgctctgctggaggcagctctgggtctggagcgggcgcacatgggaatgttcacagag
ctggccatcctgtactccaaattcaaaccacagaagatgagggagcacctggaactcttc
tggtccagagtcaatattccgaaggtcctccgtgctgcagaacaggcacacctgtgggca
gagctggtcttcctctatgataaatatgaagagtatgataatgcaataataaccatgatg
aatcacccctctgatgcttggaaggaagggcagttcaaagacatcatcgctaaggtggcg
aatgtggagctgtattacaaagccctgcagttctatttggattacaaacccctgctgatc
aatgaccttctggtggtgctgtctcctcgacttgaccacaccagggcagttagtttcttt
gcaaagatgaaccagctgcagcttgttaagccttacctacgctcggtgcagaatcacaac
aacaaaggtgtaaacgaatctttaaataacctgcttactgaagaggaagattaccagggc
ctgagagcatccatcgatgcttatgataactttgacaacatcagccttgcccagagacta
gagcggcatgaactgattgaattccgacgcatcgctgctttcctgtacaagggtaacaac
cgctggaaacagagcgtggagctttgcaagaaagatcgtctctacaaggatgccatgcag
tatgcagccgagtccaaggacacggagctggcggagaatcttctgcagtggttcctggag
gaaggtaaacgggagtgcttcgcttcctgtctcttcacatcctacgatctgctgcaccct
gatgtggtcctggagctggcttggaggcataacattatggactttgcaatgccttacttc
atccaagtaatgagggaataccttactaaagttgatgagattgctgagaaggtgacggtg
gataaactagaggactcggaaagcctgcgaaagaccgaggaggaagttgcagaaccaact
ccaatcgtgtttggtcagcagctgatgttgactgcaggttccagtccggtcccccctcag
gcaggatatccagcatatggatacactgctcctggctttgcctcccagtccgcctatgga
tacaatatgtaa
DBGET
integrated database retrieval system
