KEGG   Acipenser ruthenus (sterlet): 117428188
Entry
117428188         CDS       T07327                                 
Name
(RefSeq) LOW QUALITY PROTEIN: polyubiquitin-B
  KO
K08770  ubiquitin B/C
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut03320  PPAR signaling pathway
arut04120  Ubiquitin mediated proteolysis
arut04137  Mitophagy - animal
arut04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:arut00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    117428188
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    117428188
   04137 Mitophagy - animal
    117428188
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    117428188
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:arut04121]
    117428188
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:arut04147]
    117428188
Ubiquitin system [BR:arut04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   117428188
Exosome [BR:arut04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   117428188
  Exosomal proteins of other body fluids (saliva and urine)
   117428188
  Exosomal proteins of colorectal cancer cells
   117428188
  Exosomal proteins of bladder cancer cells
   117428188
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 Rad60-SLD_2 DUF2604 TBK1_ULD Dsc3_N Ubiquitin_5
Other DBs
NCBI-GeneID: 117428188
NCBI-ProteinID: XP_034781266
LinkDB
Position
12
AA seq 482 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKR
GGMQIFTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
TLHLVLRLRGGMQIFVKTLTGKTITLEVEPADTIENVKAKIQDKEGIPPDQQRLIFAGKQ
LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDK
EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESXQLEDGRTLSDYNIQKESTLHLVLRLRG
GQ
NT seq 1449 nt   +upstreamnt  +downstreamnt
atgcagatctttgtgaagaccttgactggtaagaccatcaccctggaggttgagcccagt
gacaccattgagaacgtgaaggccaagatccaagacaaggaaggcatccccccagaccag
cagaggctgatcttcgctggcaagcagcttgaagatggccgtaccctgtccgactacaac
atccagaaggaatccaccctgcacttggtgctgcgtctgaggggaggtatgcagatcttt
gtgaagaccttgactggtaagaccatcaccctggaggttgagcccagtgacaccattgag
aacgtcaaggccaagatccaagacaaggaaggcatccccccagaccagcagaggctgatc
ttcgctggcaagcagcttgaagatggccgtaccctgtccgactacaacatccagaaggaa
tccaccctgcacttggtgctgcgtctgaggggaggtatgcagatctttgtgaagaccctg
actggcaagaccatcaccctggaggttgagcccagtgacaccattgagaacgtcaaggcc
aagatccaagacaaggaaggcattcccccagatcagcagaggttgatctttgctggcaag
cagctggaggatggccgtaccctgtctgactacaacatccagaaggaatccaccctgcac
ttggtgctgcgtctgaggggaggtatgcagatctttgtgaagaccttgactggtaagagg
ggaggtatgcagatctttaccatcaccctggaggttgagccatctgacaccattgagaac
gtgaaggccaagatccaagacaaggaaggcatccccccagaccagcagaggctgatcttc
gctggcaagcagcttgaagatggtcgcacgctgtcagactacaacatccagaaggaatcc
accctgcacttggtgctgcgtctgaggggaggtatgcagatctttgtgaagaccttgact
ggtaagaccatcaccctggaggttgaaccagctgacaccattgagaacgtgaaggccaag
atccaagacaaggaaggcattcccccagatcagcagaggttgatctttgctggcaagcag
ctggaagatggccgcaccctgagcgactacaacatccagaaggagtcgacccttcacttg
gtcctgcgtctgagaggaggaatgcagatctttgtgaagaccctgactggcaagaccatc
actcttgaggttgagcccagtgacactattgagaacgtgaaagccaagatccaagacaag
gaaggcattcccccagatcagcagaggttgatcttcgctggcaagcagctggaggatggc
cgcaccctgagcgactacaacatccagaaggagtccnagcagcttgaagatggtcgcacg
ctgtccgactacaacatccagaaggagtccaccctgcacttggtgctgcgtctgagggga
ggacagtaa

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