Acipenser ruthenus (sterlet): 117428210
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Entry
117428210 CDS
T07327
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arut03021
]
117428210
Transcription machinery [BR:
arut03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
117428210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
117428210
NCBI-ProteinID:
XP_033902908
LinkDB
All DBs
Position
12:10319461..10450339
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AA seq
2099 aa
AA seq
DB search
MTAAANWVANGASLEDCHSNLFSLAELTGIKWRRYSFHGNGECGPVISAPAQDDPILRSF
TRCVHANLLCVWRRDVKPDAKELWIFWWGEDPNLTDIIHHELEVAEEGLWESGLSYECRT
LLFKAIHNLLERCLMDKSFVRIGKWFVKPYEKDEKTVNNSEHLSCAFTFFLHGESNVCTS
VEIAQHQPVYLINEEHITIAQSRAAPCQVILSPYGLSGTLTGQAYKMSDPAARKLMEEWC
YFYPMVLRRRESERADGEPGYDNSSHVAVEVIVGGVRMVYPSAFVLIAQSEVPVAQPSTS
AGLRDPTGCSIPLTPPSSPEQTCTGDSGIQTAISSLPGQEPGIMTTPSPKHSGRKLANQT
VQQVWKECYRNRTQHKRTLSGSTTPEEEVPAWGFTDPVERAHCCCSRHKLQKQRQATAVG
RTPLNPQPGSNPTPPAVPSLPPPAPPKHKAADKPEKIDKQPKRQALIPFHHRPLFCEELC
LDQDPRAGPKLGPMDPPTEVLSDRKYSKQLPPPSKALDSPPHSPASPLPPTLSPHPRGQD
SDGREPGVGLPMYQELLPGRKLPDLSETALYAPPLCSGEEGGGWWRGYKTPNAEDSEFRT
PELLPDCGEFKMEAVTEGAALKRLFAQPHKRFKMCEERVREQVQAGAEGLGDPCDPYTFV
DGEIEYSFTASKRGRGQSQERDPCRKTKAEDGNSTPVPDGKDAMSIFSSAPKSEEPQEDS
AAAKAILNPSLTRETDLVVLISDLENIFDNSDSDELGTTSPTRRSLKAAVLGSEDRPLGK
DGRTAVPYHPTVADLQRMFPTPPSLEQHPAFSPVMTYRDALGSEPANLASMETPLSTLAS
APLSAFRMEVEEGMASPKPEEIKDFSFVFRPPQVQPLIGSSMFAPLRTLPSQCLPPLKIP
ESCCYRPPWSVPPKIEQLPLTPHAPFSRDGYVNVPSVGSLMEQDYIQMNTPQTSTPAAVN
SAASASNTAVQPSPSPATPRFSVPTPRTPRTPRTPRGGGAASGQGSVKYDGTDLCSPAST
PSTSRPLSSVEPSALAPLPEAHSLYVVLILSDSVLNIFKDRNFDSCCICACNMNVKGADV
GLYIPDSTREDQYRCMCGFSAIVNRRLAHAAGLFLEDELDIFGRGSEMGQAAERRLALCH
RTSPLGDPASKRPQDPPAALLVLLQEQCSQPLSSLSSLDLPATCSCPGRQGALSQSWAAE
KLWADGSDSCVECFNALEQGQQYVDNPAGGKVDQALVRSSALHDWPHNSVLDVSVLSSQD
VVRMLLSLQPFLQDAIQKKRTGRTWENIQHVQGPLTWQQFHKMAGRGSYGSEESPEPLPI
PTLLVGYDRDFLALSPLALPFWEKLLLEPYGGQRDTAFLVVCPDSEALISGAKSFFRDLS
SVYEACRLGQHRPLARVSRDGLVRVGSLSPQRLEEEPVDEWFSQPWGSNGDEDNLTKLRL
YAHTCRHQLAPQLAALSLDSTLLLPPKPQPPTASPTGQSTPSSLPPAPLPTGHTSTPTPP
APASQPPPPTSGSTAGQTGTERPQENSLNTEAENGQSLAPPATGQHESQESSAERERIGI
PTEPESADSHAHPPSIVVYVVDPFQSEAAEEAEPGSVWLLGLLRCYTDILQSLPDTLKPA
LVLQLVPCQYLLQPVKDERSHYIQHLRSLAFSTYSQCRRLLPTQIHIKSLTGFGPAATID
TVLKNTERPSPLQLYSPPFVLGPMRNRQLEMGEAAGEAAQRYSVLLVGYCLSHDQRWLLV
SCTDLHGDLLETCVINIDVPNRARRTKVSARKMGLQKVWEWCVGIIQMTSQPWRIVIGRL
GRLGHGELKDWSILLGECSLQSISRQLKETCRMCGISACDSPSILSACLVAMEPQGSFVV
MPDAVTMGSVFGRSTALNLQTSQLNTPQDASCTHILVFPTSATTQVAPGTYPIEDNQDDM
FDIPFPDELENDIGNDMMLITSSPVPSPGSPSGIGGGSHFQHSRSQGERLLSREAPEELK
QQPLALGYYVSTAKADNLPQWFWASCPQAQYQCPLFLKASLHHHISVAHTDELILNKNSQ
RTPHPLDSKTTSDVLRFVLEQYNSLSWLTCSPATQDRRSCLPVHFVVLTQMYNAILNML
NT seq
6300 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgcagcgaattgggtggctaacggggcgagccttgaggactgccattccaac
ctcttttctctggcagagctgaccggtatcaaatggcgtcggtacagtttccatgggaac
ggggagtgcggcccggtgatctcggcgcccgcccaggacgaccccatcctgcgcagcttc
acacgctgtgtccacgccaacctgctctgcgtgtggcgccgcgatgtcaaacccgacgcc
aaggagctgtggatcttctggtggggggaggaccccaacctcactgacatcatccaccat
gagctggaggtggcggaggaggggctgtgggagagtgggctgtcttacgagtgcaggacg
ctcctcttcaaagcgatccataacctgctggagaggtgcctcatggacaaaagctttgtg
cggattgggaaatggtttgtcaagccttacgagaaggacgagaaaactgtgaataacagt
gagcacctgtcctgcgcgttcacattcttcctgcatggtgaaagcaatgtctgcacaagt
gtggagatcgctcagcaccagccagtgtacctgatcaatgaagagcacatcaccatcgcc
cagagcagagctgctccctgccaagtgattctgagcccctatgggctgagcgggaccctt
actggccaggcctacaagatgtctgacccggcggcccgcaagctgatggaggagtggtgc
tacttctaccccatggtgctgcgcaggagagagagcgagcgggccgacggggagccaggc
tacgacaacagcagccacgtggcggtcgaggtcattgtgggtggtgtgcggatggtgtac
ccctctgcctttgtgctcattgctcagagcgaggtgcctgtggctcagccctccactagt
gcaggactgagggaccccacaggatgcagcatccccctgaccccccccagctccccggag
cagacctgcacaggtgacagtgggatccagaccgcgatcagcagcctgccaggacaggag
ccgggcatcatgaccacccccagccccaagcattcggggagaaaactggccaaccagact
gttcagcaggtgtggaaggagtgctaccggaacagaacgcagcacaagaggaccttatct
ggcagcacaacccccgaggaggaagtgccagcgtggggcttcaccgaccctgtggagcga
gcgcactgctgctgttccagacacaaactacagaagcagcgtcaagccactgcagtaggc
cgcacccccttgaaccctcagccaggctccaaccccacccctcccgctgtcccctctctc
ccccctcctgcgccccccaagcacaaggcagccgacaaacctgagaagatagacaaacag
cccaagagacaggcactgatccccttccaccatcgccccctcttctgtgaagagctctgc
ctggatcaggaccctagagctggacccaagctgggacccatggacccccctactgaggtt
ctctctgaccgcaagtactccaagcagctcccccctcccagtaaagcccttgattccccc
ccgcactccccggcctcccccctgccccccaccctcagcccgcaccctcgggggcaggac
tcagatgggcgggagcctggtgtggggctgcccatgtaccaggagctgctgccaggccgc
aagctgcccgatctgagtgagacggctttgtatgcacccccgctatgctccggcgaggag
gggggaggctggtggagaggctacaagacccctaacgcagaggactccgagttcagaacc
cctgaactgcttcccgactgcggagagttcaaaatggaggctgtgactgagggggccgcc
ctgaaaaggcttttcgctcagccccacaagcgtttcaagatgtgtgaggagcgtgtccgt
gagcaggtgcaggcgggggctgaggggctgggggacccctgtgacccctacacctttgtg
gatggagagatcgagtacagcttcactgccagcaagagaggaagagggcagagccaggag
agagacccctgcaggaagacaaaggcggaagatggcaactctaccccagtgcccgatggg
aaagatgctatgtcaatttttagttctgctcctaagtcagaggagcctcaggaggacagc
gctgcagccaaagccatcctgaaccccagcctgaccagggagaccgacctcgtggtcctc
atctctgacctggagaacatattcgacaactcggactcggacgagctggggaccacctcc
ccaacacgccggtccttgaaggctgccgtcttgggatctgaagatcgccccctggggaaa
gacggtagaactgcagtgccatatcatccaacagtggcagatctgcagcgcatgttcccc
acgcccccctctctggagcagcaccctgccttctctcctgtcatgacgtaccgggacgcg
ctgggctcggagcctgccaatctggccagcatggagacccctttgagcacgctcgccagc
gcccccctctctgccttcaggatggaggtggaggaaggcatggccagccccaagccggag
gagatcaaggacttttcctttgtgttccggccgccccaagtgcagcccctgattggttcg
tccatgttcgcccccctgcggaccctccccagccagtgcctcccccccctcaagatccca
gagtcctgctgctaccggccgccctggtccgtgccccccaagatcgaacagctgcccctg
actccacacgcccccttcagtcgagacggatatgtcaatgtgcctagcgtgggaagcctg
atggagcaggactacattcagatgaacacgccccagaccagcacaccagcagcagttaac
agtgcagcctctgccagcaacactgccgtccagccctccccctccccagccacccctcgc
ttctctgtgcccacccctcgcactccccgcaccccccgcacgcccaggggagggggggcc
gccagcgggcaggggtcagtcaagtacgacgggacggatctgtgttccccagcttctact
ccctccactagccgaccgctcagctctgtagagccctcggcgctggcccctctgcctgag
gcacacagcctgtacgtggtgctcatcctgtccgactctgtgctcaacatcttcaaggac
cgaaacttcgacagctgctgcatctgcgcctgtaacatgaacgtgaagggggccgacgtg
gggctgtacatccctgactccacacgggaagaccagtaccgctgcatgtgcggcttcagt
gccatcgtcaaccgccgcctcgctcacgccgcgggcctcttcctggaagacgagctggat
atcttcggccggggctcggagatgggccaggcggctgagcggagactggcactgtgccac
aggacctccccactcggagaccccgccagcaagcgccctcaagaccccccggctgctctg
ctggtgctgctgcaggagcagtgctcccagcccctctcctccctcagctccctggacctc
cccgccacctgctcctgccccggccgccagggggctctctcgcagagctgggctgctgag
aagctgtgggcagacgggagtgactcttgtgtggagtgttttaatgcgctggagcagggg
cagcagtatgtggataacccggctgggggcaaagtggaccaggcccttgtgaggagcagc
gctttgcatgactggccacataacagcgtgctggatgtcagcgtgctgtcttcgcaggac
gtggtgcgcatgctgttgtccctgcagcccttcctgcaggacgccatccagaagaaaagg
accggccggacctgggagaacatccagcacgtgcagggcccgctcacctggcagcagttc
cacaagatggccggccgcggctcctacggttcggaggagtccccggagcctctccctatc
cccactctgctggtgggctatgaccgggacttcctggctctgtcccccctggccctgccc
ttctgggagaagctgctgctggagccgtatgggggccagagagacaccgctttcctggtg
gtgtgtcctgacagcgaggccctgatcagcggagccaagagcttcttcagggacctgagc
tctgtctacgaggcctgtcggctggggcagcaccgcccccttgccagggtgtcccgggat
ggtctggtgcgcgtgggctccctgtctccccagcgcctggaggaggagccggtggatgag
tggttcagtcagccctgggggagcaatggggatgaggacaacctgaccaaactgcggctc
tacgcacacacctgcagacaccagctggcacctcagcttgcagcgctgtcactagacagc
accctgctcctgcctcccaaacctcagcccccaacagcgtcccctacaggccagtccacg
ccaagctccctgccacccgcaccactgcccacaggacatacttccacccctaccccccca
gccccagcgtcccagccccccccacccacctcaggctccactgcagggcagacggggacc
gagcgcccccaggagaactccctgaacacagaggctgagaatgggcagagcctggctcca
ccagcaacagggcaacacgagagccaggagagctctgcagagagggagcgaatcggaatc
cccacggagccggagtcggcagacagccacgcccacccgccgtcgatcgtggtttacgtg
gtggaccccttccagagcgaggctgccgaggaggcggagcctggcagtgtgtggctgctg
ggactgctgcgctgctacactgacatcctgcagagcctgcctgacaccttgaagccagcc
ctagtactgcagctggtgccctgccagtacctgcttcagcctgtgaaggatgagcgctcc
cactacatccagcacctgcgatcgctggccttctctacctactcacagtgccggcgcctg
cttcccacgcagatacacatcaagagcctcactggctttggacccgccgccaccatcgac
accgtgctcaagaacacagagcggcccagtcctctgcagctgtactctccccccttcgtg
ctgggacccatgaggaaccggcagctggagatgggggaggcagcgggggaggctgcccag
cgctacagtgttctcttggtggggtactgcctgtcccatgaccagcgctggctgcttgtt
tcctgcacagacctgcacggggatctgctggagacctgcgtcatcaacatcgacgtgcca
aaccgggctcgcaggacgaaggtttctgccaggaagatgggcctgcagaaggtctgggag
tggtgtgtgggcatcatccagatgacatcacagccatggaggatagtgattggccggttg
ggacgtctgggtcatggagaacttaaagactggagtatcctcctgggagagtgctctctt
cagtccatcagtcggcagctcaaagagacatgtcggatgtgtgggatctcagcctgcgac
tccccctctatcctcagtgcctgcctggtcgccatggagccccagggatcctttgtcgtg
atgccagacgcagtgaccatgggctctgtgtttggccgcagcactgccctcaacctgcag
acctctcagctcaacaccccgcaggacgcctcttgcacgcacatcctggtcttccccacc
tccgccacaacccaggtggcacccgggacctaccccatagaagacaaccaagatgacatg
tttgacatcccgttcccggacgagctggagaacgacattgggaatgacatgatgctgatc
acctcctcccccgtcccctccccggggtccccctcagggattggagggggctcccacttc
cagcacagccggagtcaaggagagaggctgctgtcccgggaggccccggaggagctcaag
cagcagccgctggctctcggctactatgtctccactgccaaggctgacaacctgccccag
tggttctgggcatcctgcccgcaggcacagtaccagtgcccgctctttctcaaggcttcc
cttcaccaccacatctcggtagctcacacagacgagctcatcttgaacaagaactcccaa
aggaccccccacccacttgactctaagaccacctctgatgtgttgaggtttgtcctggag
cagtacaactctctgtcctggctcacctgcagccctgccacccaagaccgccgctcctgc
ctgcccgtccactttgtggtcctcacacagatgtacaatgccatcctgaacatgctttag
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