Acipenser ruthenus (sterlet): 117428240
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Entry
117428240 CDS
T07327
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8-like isoform X1
KO
K11839
ubiquitin carboxyl-terminal hydrolase 8 [EC:
3.4.19.12
]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04137
Mitophagy - animal
arut04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117428240
04137 Mitophagy - animal
117428240
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
arut01002
]
117428240
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arut04131
]
117428240
04121 Ubiquitin system [BR:
arut04121
]
117428240
Enzymes [BR:
arut01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117428240
Peptidases and inhibitors [BR:
arut01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117428240
Membrane trafficking [BR:
arut04131
]
Endosome - Lysosome transport
Others
Others
117428240
Ubiquitin system [BR:
arut04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117428240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP8_dimer
WW_USP8
UCH_1
Rhodanese
Motif
Other DBs
NCBI-GeneID:
117428240
NCBI-ProteinID:
XP_033902987
LinkDB
All DBs
Position
19:3734319..3747498
Genome browser
AA seq
1084 aa
AA seq
DB search
MPGVSSGVKELYLSSSLGELNKKAEIRADKINTRSYVQSACKIFKTAEECRLDRDEEKAY
VLYMKYLSVYELIKKRPDFKQQQEYYLSILGPTSFKKAIEEAEKLSDSLKLRYEEAEVRK
RLEERERQEEKKKQEKFRNEEEDSGKSALKDLPGFRKENKKIKGDPIDAKKVESDTTKGG
ITAEKLFKMLQDPRISVIVMDARSQNDYQESRMQVSTQSCISVPEEAVSPGITVNLIEAK
LPEESKGQWKQRGVVDYIVMLDWFSSVKDLKLGTTLQSLKDALFKWDSQTILQSEPFVLE
GGYESWLLCYPMYTTNAKVILPRQERTETIPVSLNFSYPSLEEPPAPVTPEPEPEPQPEP
EPEPSLELNGMKGSVEAELPKEDVEELDETSRIITKQTPWSPSASAAKPVNVSARQPAVT
AKVIPQFDRTKKPSVKIPDSSRPNHEATAKDQQPVPNGPVIPDRSIKPSFDKKNQEEQRR
DQERQELERRMKEEEEEERKWREKLQEEREKEERERKLKEEVERLDAEKAEQDKEHTGDA
QEKSSRESSPDITTNDENKVPLKHSNEVENGSRKTRFIKDNTEEDIEKPKPQREPLTRAR
NEEMGRSVPGLPNGWMKFLDTVTGTYRYYHSPTNMVHLYLPEMSISATPPATPPTAKLMQ
PPQAELDREHSKLKRSYSSPDITQAIQEEGKKKVPVIPTINRETKPPSLTDYTKTEIVVR
PSAAKIRNLNPVFGGLGPALTGLRNLGNTCYMNSILQCLCNTPRMAEYFHRNYYQDDINR
SNFLGHKGEVADEFGVIMKALWSGQYKFISARDFKITIGKINDQFAGYDQQDSQELLLFL
MDGLHEDLNKRADNRKRYKEETTDHQDDNKAADLAWEKHKRLNESIIVALFQGQFKSTVQ
CLTCHRKSRTFEAFMYLSLPLASSNKCTLQDCLKLFSKEEKLTDNNRFFCSHCKTHRDST
KKIEIWKLPPILLVHLKRFSYEGRWKQKLQTSVDFPLENLGMSQYVIGPNNNLKKYHLYG
VSNHYGGLDGGHYTAYCKNAVKQRWYKFDDHDVSELSASSVKSSAAYIFFYSSLDHRVPE
MAAY
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgccaggagtgtcgtcaggtgtgaaggagctgtacctttcatcctctttgggtgagcta
aacaagaaggctgagattagagcagacaaaatcaatacaagaagctatgttcagagcgca
tgtaaaatctttaagacggcagaggagtgtcgtttagacagagatgaagaaaaggcatat
gtcctgtatatgaagtatctgtctgtctatgagcttattaaaaaacgaccagacttcaag
caacagcaggaatattacctctctatccttggaccaacaagctttaaaaaggctatcgaa
gaagcagagaagctgtcagatagtcttaagctcaggtatgaggaagccgaagtgcgcaaa
aggcttgaagaaagagaaaggcaagaagaaaagaaaaagcaggaaaaattcagaaatgag
gaagaggactcggggaagagtgccttgaaggacttgccaggtttcaggaaagaaaataag
aagataaaaggggatccaatagatgcaaagaaggtagaaagtgatacaactaaaggagga
atcacagctgaaaaactcttcaaaatgctgcaggatccaagaatcagtgtcattgtcatg
gatgcaaggagtcaaaatgattaccaagagtcacgaatgcaagtgtctacccagagctgc
atcagcgttcctgaagaggctgtcagtcctggaataactgtaaacctgattgaggccaag
ttgccagaggaatccaaagggcagtggaagcagcggggggttgtggattacatcgttatg
ttggactggttcagctctgtgaaggatctaaagctagggacaactctgcagagtctaaaa
gacgccctgtttaagtgggacagtcagactatcttacagagtgagcccttcgtcttggaa
ggaggttatgaaagctggcttttgtgttatcccatgtatacaaccaatgctaaagtcata
ctgcccaggcaagaaaggactgaaactatccctgtgtctttgaacttcagctatccatcc
ttggaggagcctcctgcccctgttaccccagagccagagcccgagccgcagccagagccc
gagccagagccctctctggagctgaatggaatgaaagggtctgttgaagcagagcttccg
aaggaagacgtggaagagctggatgagacctcaagaataatcactaagcagactccatgg
tctccttcggcttctgctgctaaacctgtgaatgtgtcagccaggcagcctgcagtgacg
gcaaaggttattcctcagtttgaccgcacaaaaaagccatcggttaaaataccagacagt
tccagaccaaaccatgaagccacagccaaggaccaacagccagttccaaatggaccagtc
attccagaccgttcaataaagccatcgttcgacaagaagaaccaggaggagcagcggaga
gatcaagagaggcaagagctggagcggaggatgaaggaagaggaggaggaggagaggaag
tggagagagaagctgcaggaggagagagagaaggaagaaagagagcgcaaactcaaagaa
gaggtggaaaggcttgatgcagaaaaggcagagcaggacaaggagcacactggagatgct
caggagaagagctctagagaatcctctcctgatattacaaccaatgatgagaacaaagtt
cctttgaaacatagtaatgaagtagagaatgggagccgaaagacaagatttataaaagat
aataccgaagaagacattgaaaaaccgaagccccagcgagagccattaacacgagcaaga
aatgaggagatggggcgaagtgtcccgggactgccaaatgggtggatgaagtttttggac
acggtgactggtacttaccgttactatcattcacctacaaacatggtccacttgtacctg
cctgagatgagtatatctgcgactccacctgctactccccccaccgctaaactaatgcag
cccccccaggcagagctggacagggagcactccaagctgaaacgctcctattcgtcccca
gacatcacccaggccattcaggaggaggggaagaagaaagtccctgtgatacccaccatc
aaccgggaaaccaagcccccaagcctcactgactacactaaaacagaaattgttgtgcga
ccctcggcagccaagatccgtaacctgaaccctgtgttcggaggcctagggcccgctctc
actgggcttcgaaatctcggcaatacctgctacatgaactccatcctgcagtgtctgtgc
aacacgccccgcatggctgaatacttccacaggaactattatcaagatgatattaacaga
tccaattttctgggacataaaggtgaggtagctgatgaatttggggtaataatgaaggca
ctgtggtcagggcagtataaattcataagtgctcgagacttcaaaatcaccattgggaag
atcaacgaccagtttgctggctatgatcagcaggattcacaggagctgttgcttttcctg
atggatgggctccatgaagatctgaataaaagagctgacaataggaagaggtacaaagaa
gaaaccactgaccaccaggatgacaacaaagcagcagaccttgcttgggaaaaacacaag
aggctcaacgagtccatcattgtcgctctgttccaaggccagttcaaatccacagtacag
tgtctgacttgccatagaaaatcaaggacgttcgaagctttcatgtatttatcattgcca
ctagcatcctcaaacaagtgtacactgcaggactgcctgaagttattctccaaagaggag
aagctgacagacaataacagattcttttgcagtcactgcaaaactcacagagattcaaca
aagaaaatagaaatctggaaactcccacctattctgttagtgcatttaaaacgattttca
tatgaaggacggtggaaacagaagctccagacttctgtagactttcctttggaaaacttg
ggcatgtcccaatatgtcattggcccaaataataacttgaaaaaatatcacctctatgga
gtatctaaccattatggaggcttggatggagggcactacactgcctactgtaagaatgct
gtgaagcagcggtggtacaagtttgatgaccatgacgtgtcagaactttctgcatcttca
gtaaagtcctcggctgcttatatcttcttctactcctcactggaccaccgagtgcctgaa
atggctgcatattaa
DBGET
integrated database retrieval system
