Acipenser ruthenus (sterlet): 117428296
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Entry
117428296 CDS
T07327
Name
(RefSeq) E3 ubiquitin-protein ligase arih1 isoform X1
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117428296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117428296
Enzymes [BR:
arut01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
117428296
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
117428296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
UBA_ARI1
IBR_1
IBR_2
Ariadne
zf-C3HC4_2
zf-C3HC4
zf-RING_14
zf-RING_2
zf-RING_5
zf-RING_UBOX
zf-C3HC4_4
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
117428296
NCBI-ProteinID:
XP_033903063
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All DBs
Position
27:complement(24053690..24076025)
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AA seq
538 aa
AA seq
DB search
MDSDEGYNYEFDDEEECSEDSAEEELEDDTLELGEVELVDPAEAGGERDVCGETGSSGLG
PGQDEEDYRFEVLTADQILQHMVECIREVNEVIQNPATITRILLSHFNWDKEKLMERYFD
GNLEKLFSECHVVNPSKKSRTRQMNTRSSAQDLPCQICYLNYPNAYFTGLECGHKFCMQC
WGEYLTTKIIEEGMGQTISCPAHSCDILVDDNTVMRLITDSKVKLKYQHLITNSFVECNR
LLKWCPAPDCHHVVKVQYPDAKPVRCKCGRQFCFNCGENWHDPVKCKWLRKWIKKCDDDS
ETSNWIAANTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEPHGSAWYNCNR
YNEDDAKAARDAQEVKSGTGDGGLAKRSRAALQRYLFYCNRYMNHMQSLRFEHKLYAQVK
QKMEEMQQHNMSWIEVQFLKKAVDVLCQCRATLMFTYVFAFYLKKNNQSIIFENNQADLE
NATEVLSGYLERDISQDSLQDIKQKVQDKYRYCESRRRVLLQHVHEGYEKDLWEYIED
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggactcggacgaaggatacaattatgaattcgacgacgaagaggagtgcagcgaagac
agcgctgaagaggagctcgaagacgacaccctggagctcggagaggtggagttggtcgat
cctgccgaggccggcggcgagcgggatgtatgcggggagaccgggagcagcggcctgggg
cccggccaagacgaggaggattaccgctttgaggtgctcaccgcggatcagatcctccaa
cacatggtggagtgtatcagggaggtcaacgaggtcatccagaacccagcaacaattaca
agaatactacttagccacttcaactgggacaaggagaagctgatggagaggtactttgat
gggaacttggagaagctgttttcagaatgtcatgttgtaaaccctagtaagaaatcccgg
acacgccagatgaacacaaggtcctctgcacaggacctgccgtgccaaatctgctacctg
aactaccccaatgcgtatttcactggcctggagtgtggacacaaattctgcatgcagtgt
tggggtgaatacctaactaccaaaatcattgaggagggaatgggacagactatttcctgc
ccagctcacagctgtgatatcctagtagatgacaatacagttatgagactcataacagat
tcaaaagtgaagttgaagtaccagcatttaattactaatagttttgtagagtgcaataga
ctgttaaaatggtgccctgcgcctgattgccatcatgttgttaaagtccaataccctgac
gctaagccggtccgctgtaaatgtggccgccagttctgtttcaactgtggtgaaaattgg
catgaccctgtcaaatgcaagtggttaaggaagtggataaaaaagtgtgatgatgacagt
gaaacttcaaactggatcgcagctaacaccaaggagtgtcccaaatgccatgttaccatt
gagaaagatggcggctgtaatcacatggtctgtcgtaaccagaattgtaaagctgaattc
tgttgggtctgtcttggaccctgggaaccacatggatctgcttggtacaactgcaaccgc
tacaatgaagatgatgctaaagcagcgagagatgcccaggaggtaaagtccggaaccggg
gatggagggctagctaagcgctcccgggcagctctgcagaggtacctgttctactgcaat
cgctacatgaaccacatgcagagtctgcgctttgagcacaagctgtacgctcaggtcaag
cagaagatggaggagatgcagcagcacaacatgtcctggatcgaggtgcagtttttgaag
aaggctgtggacgtgctctgccagtgccgtgccacactcatgttcacttacgtttttgca
ttctacctcaagaagaataatcagtccattatctttgagaacaatcaggcagacttggag
aatgccaccgaggtgctgtctgggtacctggagcgtgatatttcgcaggattcactgcaa
gacatcaagcagaaagtgcaagataagtacagatattgtgagagtcggcgaagagtgttg
ctacaacatgtgcatgaaggttacgagaaagacctctgggagtatattgaggattga
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