Acipenser ruthenus (sterlet): 117428306
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Entry
117428306 CDS
T07327
Name
(RefSeq) LOW QUALITY PROTEIN: TP53-binding protein 1-like
KO
K20915
tumor suppressor p53-binding protein 1
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117428306
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Gene cluster
GFIT
Motif
Pfam:
53-BP1_Tudor
BRCT_3
Tudor_5
BRCT_2
RTT107_BRCT_5
DUF4537
SH3_Hsr9
Motif
Other DBs
NCBI-GeneID:
117428306
NCBI-ProteinID:
XP_034757921
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All DBs
Position
19:complement(8555050..8568033)
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AA seq
1434 aa
AA seq
DB search
MLDATKSVSLQKASEMGALDKTSNVPKVPAPVSSETAISLLKPSETVDLTNTSSSEKPDT
VDLTLTSSLPQVPVETLDLTKTTTSGLPQEVPELEDKPRAPGIVKGLEADSPATATQVHE
EPMEIQAGNVVVSSESQPEAAISSKASHHEIRDEPLEKRSEDVVEETPEEEQEKMEEGVE
GSGLCLALSQSQALSLGPEPMEEEEKSSERTGYPKSTDQPPCAQESILKQDSKEEKKSEA
ENSFSSSVIVVEESERESFDKGSEKTPQQRKGEAGSSQPIIVESCPDDSPSILEIPEEKG
GGTTKSSLAPTASARQDGEEPGQSKQLEEAGCAIEVEGQRGDKSLSDSSGDIPFHFTLPK
EGELIHPAASATPPLIGQLKQRPRHSTPIEVGSCSDNTVVTGDVTRETAMATSDIMAEES
GGEGAKQDSASTTAEHDGKLSLRMKLVTPVNEESPESARFSLQKPALSQEEGSVAMAPTV
AMAVTSPQRSQSVFSRVCEVRRQVEVAGPGHPSTPTRGDPYRTPCSQDGDAGLEGQRAPR
LKQISRSHALTSRSSLDIGQSGGTPQREEEPGSGSEGSQGHSGVSSSQSLPQERAMWASR
RVKEIQTEALTPRPVEEAATQTERLGLPEKQEEEEEEEEEEGEEEDDDDDEEGDPLERCS
AAVQTDSPAKSQLRRRAVSQQTSFESSGPQNLQSRLRQRAVSQQTSFEAGSTRSLHDKEE
LELPLSQPVPGHSVRRHVRTIREVRTIVTRIITDVYYEDGREVDRTVTEESEEPVVDCRV
LESDASPSRTGGSMTSGDLGDVSSLSSKTPSLHRSSSGASSGGAGTARAAGSGDTAGKFA
IPLGRGTPTRHANRQKASAQMPEGPEGTVAGGEDGDRAPGTPRGRGRRGRPPSRTSLSRE
CMVPAQRDGAPNPASSSSEEEAYTRVCVRPEQPPAHSAELSSPRGTLRRSDSPELPLXTV
PVPPDTSGGSSFVGLRVVAKWSSNGYFYSGCITQDTGAGRFRLLFDDGYECDVLGKDILL
CDPIPLETEVTALSDDEYFSAGVVKGHKKEGTDFYYCVEKDGQRKWYRRMAVILSLEQGN
RLREQFGLGPYEPVMPLTKASDISLDNLVEGKRKRRGNAVGSGTPTRGAADSPRGPGYAG
KRKLISSEDDKSPAKRGRKSASPKTGRRGELCGTSESGGELPSDPADLVETHGPLPRSAS
LFLGYAFLLTASSETDRETNHPGSESEDEYVETAPYNKRYTESQLRAGGGYILQNFNEGQ
CNAAYQTLLIADQHCRTRKYLLCLASGTPCVSHLWVRDSCHANQLLNFRSYLLPAGFGLQ
ENSIVDWHPRRSPFQSLKILLVSDRPLELWADLLMMGGASSVRQHNAATQNQEVAVGVFD
LVVTDRSCPASVLKCAAALDLPVVSPEWMIQSLIAGERLGYTTHPQYKHDHTAT
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
atgttagatgcaaccaagtccgtcagtcttcaaaaagcttctgaaatgggagctttggac
aagactagcaatgtgccaaaagttcctgccccagtgtcctcagaaacagccatcagtttg
ctgaaaccttctgaaacagtagaccttacaaacacaagcagttctgagaaaccagacact
gtagacctaactctcactagcagcttgccacaggttcctgtagaaacactagacctaact
aagaccaccaccagcggattgccgcaagaagtgccagaattagaagataaaccaagagct
cctgggattgtgaagggtctggaagctgatagtcctgctacagccactcaggtgcatgaa
gagccaatggaaatccaggctgggaatgttgtggtgtcatcggaatcacagccagaggca
gccatctccagtaaggccagtcatcatgaaattagggatgagcccttggaaaagaggagt
gaagatgtggtggaagagacacctgaggaagagcaagagaagatggaggagggagtcgaa
ggatcaggcctctgtcttgccttgtctcagagccaagctctctccctgggaccagagcct
atggaagaggaagaaaagtcctcagaaagaactgggtaccccaaaagcactgatcagcct
ccttgtgcgcaggagagcatcctcaaacaggacagcaaggaggagaagaagagcgaggca
gagaacagctttagtagcagtgtgattgtagtggaggagagcgagagagaatcctttgac
aaggggagtgagaagactccccagcaaaggaaaggggaggcaggatcatcccagcccatt
attgtggagtcttgtccagatgattctcctagtattctggagattcctgaggagaaggga
ggcgggaccacaaagagctccctcgcccccacggcctctgccagacaggatggggaggag
ccagggcagagcaagcagctggaggaggcagggtgtgccatagaggtagaaggtcagaga
ggggacaagagtctgagtgacagctcaggggatatcccatttcattttactcttcccaag
gaaggagagctgattcacccagcagccagtgcaacacctccactgattggtcagctgaaa
cagcgcccccgacacagcactcccattgaggttggatcctgttctgacaacactgtggta
actggtgatgttaccagggagactgccatggcaactagtgacattatggctgaggagagt
gggggtgagggggccaaacaggactctgcctccaccactgctgagcatgatgggaaactg
agtctgaggatgaaactcgtgacgccagtgaatgaggagagcccagagtcggcacgtttc
agtttgcaaaagccggcactgtctcaagaggaaggctctgttgccatggctcccactgtt
gctatggctgtaaccagcccccagcggagccagtctgtgtttagccgggtgtgtgaagta
cggagacaagtggaggttgcaggacctgggcaccccagcacccccaccaggggtgacccc
taccgtaccccttgttcccaggacggagacgctggtctggaggggcagagggctccgagg
ctgaagcagatctcccgcagtcacgccttgacctctcggtcctcgctggacatcggccag
tctggggggaccccacagagggaggaggagcctggctcgggatcggagggcagtcaaggt
cactcaggggtcagcagcagtcagagccttccccaggagagggcgatgtgggcgagccgc
agggtaaaggagatccagacagaagccctgacacccaggccagtggaggaggctgccact
cagacagagagactggggctccctgagaagcaggaggaggaggaggaggaggaggaggag
gaaggggaggaggaggatgacgacgatgatgaagaaggagatcccctggagagatgcagc
gcagcagtgcagactgacagcccagccaagagccagctgcgccgcagagcagtgtcccag
caaacgagctttgagtcaagtggccctcagaatctacagagcaggcttcgtcagagagcc
gtatcccagcagaccagctttgaggcaggcagcactcggagtctacatgacaaggaagag
ttggagttgcccctgtctcagccagttccgggtcactctgtccggagacacgtgaggaca
atccgggaggtgcgaaccatcgtcacgcgcatcatcactgatgtatactacgaggacggg
agggaggtggaccgcactgtcactgaggagtcggaggagccggttgtcgactgccgcgtc
ctggagagtgatgcctccccgtctcgcactggcggctccatgacctccggtgacctgggt
gatgtcagctccctgtcctccaagacgcccagcctgcatcgcagctccagtggtgccagt
agcgggggggccgggacggccagggcagcggggagcggtgacaccgctgggaagtttgct
attcccctgggccgtggcacacccaccaggcatgccaaccggcagaaggcaagtgcacag
atgccagagggccccgaggggacggtggcgggcggggaggatggagacagagcgcccggg
acgccccgcggcagggggagacgaggccgacccccgtcccgaacctccctctccagggag
tgtatggttcctgcacagagggatggcgcccctaacccagccagctcttcctctgaagag
gaagcctatacccgggtatgtgtccgtccggagcagccccctgcccactctgctgagctg
tcctccccacgagggaccttgcggcgctccgactcccctgaactccccttgnctacagtc
ccagttccccctgacaccagtggcggcagttcctttgtagggctgcgtgtcgtcgccaag
tggtcctctaacgggtacttctactcgggctgcatcacccaggacacgggtgccgggcgc
ttccgcctgctcttcgacgatggctacgagtgcgacgtgctgggcaaggacatcctgctg
tgtgaccccatccctctggagacagaggtgactgcactgtccgatgatgagtacttcagt
gcaggtgtggtgaagggccacaagaaggagggtacagacttctattactgcgtggagaag
gatgggcagcgcaagtggtaccgcaggatggcagtgatcctgtctctggagcaggggaat
cggctgagggagcagtttggactgggaccatacgagcctgtcatgccccttaccaaggcc
tccgatatcagcctggataacctggtggaggggaagcgaaaacgtcgtgggaacgcagtg
ggtagcgggacccccacccggggggcggccgacagcccacgaggcccgggatacgcaggg
aagaggaaactgatcagctcagaggacgacaaatccccagccaagcgtggacgcaagtca
gcctctcccaaaaccgggcggcgtggggagctgtgtggcacctctgagagcggtggcgag
ctgccctctgaccctgctgacctagtggagacacacgggcccctcccccgcagcgcctct
ctcttcctggggtacgccttcctgctgactgcttcctccgagactgaccgtgagaccaac
cacccgggcagcgagagtgaggacgagtatgtggagacagccccctacaacaagcgctac
actgagagccagctgagagccgggggaggatacatcctgcagaactttaacgagggccag
tgtaacgcagcctatcagaccctcttgattgcggaccagcactgccgcacccggaagtac
ctgctgtgcctggcgagcggcaccccctgcgtgtcacacctgtgggtgagggactcctgc
cacgccaaccaactgctcaacttcaggagctacctgctgccagccggcttcgggctgcag
gagaacagcattgtcgattggcaccctcgaaggagtccgttccagtccctgaaaatcctg
ctggtgtcggaccgacccctggagctctgggctgacctgctcatgatgggaggagcctcc
tccgtgcggcagcacaatgcagccacacaaaaccaggaggttgcggtgggcgtgtttgac
ctcgtcgtgacggatcgctcgtgccctgcctcggtgctgaagtgcgcggcggcgctggat
ctgccggtggtgtctccggagtggatgatccagagtctgattgccggggagagactgggc
tacaccacgcacccccagtacaaacacgaccacactgccacctaa
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