Acipenser ruthenus (sterlet): 117428332
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Entry
117428332 CDS
T07327
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2-like isoform X1
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117428332
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arut03041
]
117428332
03110 Chaperones and folding catalysts [BR:
arut03110
]
117428332
04121 Ubiquitin system [BR:
arut04121
]
117428332
Enzymes [BR:
arut01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
117428332
Spliceosome [BR:
arut03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
117428332
Complex C
U4/U6.U5 tri-SnRNP related factors
117428332
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
117428332
Chaperones and folding catalysts [BR:
arut03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
117428332
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
U-box type E3
117428332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
Type_III_YscX
Motif
Other DBs
NCBI-GeneID:
117428332
NCBI-ProteinID:
XP_033903100
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All DBs
Position
12:complement(1553209..1581387)
Genome browser
AA seq
532 aa
AA seq
DB search
MGKRQHQKDKMYITCAEYTHLYGGKKPEIPKSNFRRLPFDHCSLSLQPFEYPMCTPEGQV
FDLLSIVPWVKKFGTNPASGEKLEAKSLIKLNFFKNSEGKYHCPVLYTVFTDNSHIVTNK
KTGNVFSHEAVEQLNIKTKTYRDLLSDEPFARKDLITLQDPTNLDKFNVSNFFHVQNNLK
VTDPDEEKAKLHPAYHLKTTNLETRETLAELYKDYKGDELLASTMKPAEKKNTDKLNAAH
YSTGKVSASFTSTAMTPETIQEADAIADDTVRYQYVKKKGYVRLHTNKGDLNLELHCDMV
PKACENFIKLCKKEYYDGTVFHRSIRNFMIQGGDPTGTGTGGESFWGKPFKDEFKPNLSH
KGRGVLSMANSGPNTNKSQFFITFRSCTYLDRKHTVFGRVVGGFETVTALENVESDPKTD
RPKSEIKLLNATVFVDPYEEADAQIAADREKTLQEEAEEKAKANPVLPKSKDSLAPKTYR
PGVGKYINTVTTKRTASAEDSGPSTSGASASAAASASKKLKGKTGFGDFSSW
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaaggcagcaccaaaaagataaaatgtacatcacgtgtgctgagtacactcat
ttgtacgggggaaagaaaccagaaattccaaaatccaatttcagacgtttgcctttcgat
cactgcagtttgtctctgcagccgtttgagtaccccatgtgcacacctgaagggcaagtc
tttgacctcctgagtatagttccatgggttaagaagtttgggaccaacccagcctccgga
gagaaactggaagcaaaatcacttatcaaactgaacttcttcaaaaacagtgaaggaaaa
taccactgcccagtcctctacacagtgttcacagacaactctcacatcgtcaccaacaag
aaaactggaaatgtgttttctcacgaggcggtggaacagctcaacatcaaaaccaaaact
tacagggacctgctgtcggacgaaccctttgcaaggaaggatctcattactttgcaggat
cctacaaacctggacaagttcaacgtgtcaaactttttccacgttcaaaacaatctgaaa
gttacagatccagatgaggagaaggccaagctgcacccagcgtaccacctcaaaaccacc
aatctggagaccagggagactctggctgagctctataaagactacaaaggggacgagctg
ctggcctccaccatgaagcctgccgagaagaagaacaccgacaaactgaacgcggctcac
tactccacaggaaaagtttcagcttcctttacctccaccgcaatgacacctgaaacaatc
caggaagcagatgctattgcggatgacactgtgcgttatcagtatgtaaagaagaaagga
tacgtgcggctacacaccaataagggggacctgaatttggagctacactgcgacatggta
ccgaaagcatgtgaaaatttcattaaactgtgcaagaaagaatactacgatggcaccgtc
tttcacagatccatccggaactttatgattcaaggaggggatcccacaggaacagggaca
ggtggggagtcgttctggggaaaacctttcaaagatgaattcaaacccaacctctcgcac
aagggccgcggggtcctcagcatggcaaactcggggccaaacaccaataaatctcaattc
ttcattacgtttcgttcttgcacctacctggacaggaagcacacagtgtttgggagagtg
gttgggggttttgaaacagtaactgcattggaaaacgtggagagtgaccccaaaacagac
cgcccaaagtcggagattaaacttctgaatgcgaccgtcttcgtggatccttatgaggag
gcagatgcccagattgcagccgacagggagaagactctccaggaggaggcggaggagaaa
gccaaagcgaaccccgtccttccaaagagcaaagacagcctggccccaaagacctaccgg
cccggcgtgggcaaatacatcaacacggttacaactaagcggacggccagtgcagaggac
agtggcccctcaaccagcggagcctctgcctctgcagctgcttcagcaagcaagaagctg
aagggaaagacaggcttcggggacttcagctcctggtag
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