Acipenser ruthenus (sterlet): 117428356
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Entry
117428356 CDS
T07327
Name
(RefSeq) tuftelin-interacting protein 11-like
KO
K13103
tuftelin-interacting protein 11
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arut03041
]
117428356
Spliceosome [BR:
arut03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
117428356
Other components
Complex C specific factors
117428356
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Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
117428356
NCBI-ProteinID:
XP_034757539
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Position
19:26970777..26980061
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AA seq
841 aa
AA seq
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MSMSHLYGRDEEEDGVELERFEVTDWDLQNEFNPERRRHRQTKEEATYGMWAEHDSDDER
PSFGGKRSKDYTAPVNFISAGLRKSAAEEREQRQSQPDSDDSDDVDKGKREERPRESGPR
KLQTGASFKGSQKGFVGGPRLGQDFANWERHTRGIGQKLLEKMGYVPGRGLGKNAQGIIN
PIEAKVRKGKGAVGAYGAERTKQSLQDFPVVDSEEEEEKDFQQEMSQWRREPGQGRKKPK
YSYRTVDELKAKGYAMGKSMAAPPTELAQVKVIDMTGREHKVYSSYSQMSNKHSVPEEPP
LPPAGKEQKSPGFTLPELEHNLQLLIDLTEQEILQGARRLQHERDVVVSLSHESETLAET
LSQEEGALERLGRVLELVEQCERRLSPGPGSTEEPLSLEDCAQLFERLQGDFYEEYKAFG
LADLAVAMVHPLLKEHFRDWEPLKDGIYGIEVIGKWRATAGEQGLEDWATGVFKVPLFPR
MLWEVWLPFVRTSVTRWQPRNCGPMVDFLESWAPILPIWILENILEQLIFPKLQREVESW
NPLTDTVPIHSWIHPWLPLMQAQLEPLYPPIRSKLASALQKWHPSDSSAKLILQPWRDVF
TPGSWEAFMVKNIVPKLGLCLSEFVVNPHQQHMDPFQWVLDWEGMLSPSSLVGMLDKHFF
PKWLQVLCSWLSNNPNYEEITKWYLGWKSMLSDAVLAHPSIKEKFNEALDIMNRSVSSGI
GGYLQPGARENVAYLTHTERRKDFQYEAMQERREAESVAQRGIGAAVAAASTIPTNFKDL
IQAKAEEHNIVFMPVVGKRHEGKQLYTFGRIGIYIDRGVVFVQGEKTWVPTSLQSLIDMA
K
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcgcacctgtacgggcgcgatgaggaggaggacggggtggagctggagcgc
ttcgaggtcacggactgggacctccagaacgagttcaacccagagcgccggcgccaccgc
cagaccaaggaggaggccacctacgggatgtgggcagagcatgactctgacgacgagagg
cccagcttcgggggcaagaggtcaaaggactacaccgctcctgtgaacttcatcagcgcc
gggctgcgcaagtctgcagcagaggagcgggagcagaggcaaagccagccggactcggac
gattccgatgacgtggacaaggggaagagggaggagagaccgagggagtcggggcccagg
aaactgcagacgggcgcgagcttcaagggatctcagaaggggtttgtgggcgggcctcgt
ttgggccaggatttcgcgaactgggagcgacacacccgtgggatcgggcagaagctgctg
gagaagatgggctacgtccctgggagggggctgggcaagaatgcacaaggcatcattaac
cccatcgaagcgaaggttcgcaaggggaagggcgcggtgggggcgtacggagccgagagg
accaagcagtccctgcaggacttccccgtggtggactccgaggaggaggaggagaaggat
ttccagcaggagatgagtcagtggcggagggagccaggccagggcaggaagaagcctaaa
tactcgtacaggacggtggacgagctgaaagccaagggctacgcgatgggcaagagcatg
gcagcgccaccgacagagctggcacaggtcaaggtgatcgacatgactggacgcgagcac
aaggtctattccagctacagccagatgagcaacaagcacagcgtgcccgaagagccgccc
ctgcccccggccggcaaggagcagaagagccccggcttcacactgccagagctggagcac
aacctgcagctgctgatagacctgactgagcaggagatcttgcagggagcgcggaggctg
cagcacgagcgtgacgtggtggtgtccctgtcccacgagagcgagacgctggcggagacg
ctgtcccaggaggagggggcgctggagaggctgggccgggtgctggagctggtggagcag
tgcgagcgcaggctgagcccggggcccggtagcactgaggagcccctctctctggaggac
tgcgcgcagctcttcgagaggctgcagggggacttctacgaggagtacaaggcgttcgga
ctggctgacctggctgtggccatggtgcaccccctgctcaaggagcacttccgggactgg
gagccgctcaaggacgggatctatgggattgaggtcatcggcaaatggagggccacagct
ggagagcagggcttggaggactgggccacaggtgtctttaaggtccctctgtttcccagg
atgctgtgggaggtttggcttcccttcgtgcgcacctctgtgactcgctggcagccccgg
aactgcgggcccatggtggacttcctggagagctgggcgcccatcctgcccatctggatc
ctggaaaatatcctggagcagctcatcttccccaagctgcagagagaggtggagagctgg
aaccccctgaccgacacagtgcccattcactcctggatccacccctggctgcctctgatg
caggcacaactggagccgctgtacccaccaatccgcagcaagctagccagcgccctgcag
aagtggcaccccagcgacagctctgccaagctcatcctgcagccctggagagacgtcttc
acgcccgggtcatgggaggcattcatggtgaagaacatcgtccccaagctggggctgtgc
ctcagtgagtttgtggtgaaccctcaccagcagcacatggaccctttccagtgggtactg
gactgggagggcatgctgtctccctccagtctggtcggcatgctcgacaaacacttcttc
ccaaagtggcttcaggtgctgtgctcctggctcagtaacaaccccaactacgaggagatc
accaagtggtacctgggctggaagtcgatgctatcggacgccgtgctggctcacccctcc
atcaaggagaagttcaacgaggctctggacatcatgaaccgctccgtctcctctggcatc
ggcgggtacctgcagccgggcgctcgggagaacgtcgcgtacctcacacacacggagcgg
cgcaaggacttccagtacgaggcgatgcaggagcgcagggaggcagagagcgtggctcag
cgtggcatcggggcggcggtcgcagccgcctccaccatccccaccaacttcaaagacctg
atccaggccaaggccgaggagcacaacatcgtcttcatgcccgtggtgggcaagcggcac
gagggcaagcagctgtacaccttcgggaggatcggcatctacatcgaccgtggcgtggtg
ttcgtgcagggagagaagacctgggtgcccacctccctgcagagcctcatcgacatggcc
aagtag
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