Acipenser ruthenus (sterlet): 117428359
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Entry
117428359 CDS
T07327
Name
(RefSeq) LOW QUALITY PROTEIN: selenocysteine insertion sequence-binding protein 2-like
KO
K19539
selenocysteine insertion sequence-binding protein 2
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arut03019
]
117428359
03012 Translation factors [BR:
arut03012
]
117428359
Messenger RNA biogenesis [BR:
arut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
117428359
Translation factors [BR:
arut03012
]
Eukaryotic type
Elongation factors
Elongation associated factors
117428359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
117428359
NCBI-ProteinID:
XP_034757939
LinkDB
All DBs
Position
19:4046365..4064408
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AA seq
1068 aa
AA seq
DB search
MDASDNKDGKLSAEVEPFIPQKKGSEAVLVSMNLTNGSGEGGSASGVEPTPIPSYLITCY
PFVQENQPNRQLPLYNSDIRWQQPNPNTAGPYLAYPILSSPQPPVSNDYAYYQIMPAPCT
PMMGFYHPFASPYGAPIQTAGVVSVSSECADRPGQLFQAANQRGRGIIRSPLVSKVPQQI
QTQRPPMRSIAVQKEISASGPDNRSKIVLLVDAAQQTDFPGEIANKSLSERTSPLLWKTK
ARRRRASHPAAESSSEHGASEADIDSDSGYCSPKHSHNQATGMGTRTSDPINNSVVAESA
GTPAASWVNVASQATQKTWMDRNSQFLRGGKPAEHRNYAQVGYRGRGQSTLSERSLQRRP
PDWKPPNISQLTGAQQTTKPLYFENEDEFPDLVPAAAVSRTKTEPIQPKLPTNLLDNLPE
NSPMNIVQTPIPITTSVPKRAKSQRKKALAAALATAQEYSEISMEQKKLQEALTKAAGKK
SKTPVQLDLGDMLAALEKQQQAMKARQLTNTKPLSYTVGTAAPFHSKDSSSKKLMLKSQP
YTGPHNVLDSTAPRLKRGKEREVPKVKRPTALKKIILKEREVKKGKYSLDHSLVEPEEQS
DLQLHFTDDQSREAVSQEEMGLGMPSDASLSPASQNSPYSITPVSQGSPASSGIGSPMAT
SAITKIHSRRFREYCNQVLSKEIDESVTVLLQELVRFQERIYQKDPAKAKAKRRLVMGLR
EVTKHMRLNKIKCVIISPNCEKIQSKGGLDEALYNVIAMAREQEIPFVFALGRKALGRCV
NKLVPVSVVGIFNFSGAECLFNKLVSLTEEARKAYKDMVSAMEQEQAEEALKNVKKAPHH
MGHSRNPSAASAISFCSVISEPISEVNEKEYETNWRNMVETSDGLEASETKKEEPASRTA
VAEKPLLLHMSKPPASPLLPQPAKTAAVSGAEKDEGKPDDTLEWASQQSTETGSLDGSCR
DLLNSSITSTTSTLVPGMLEEDEDEDEEEEEDYNHKPISVEVPLTSRIESWVTEAQKTLE
NLQLGKNQDSTEEDDGGHSDEEELEASEQAEPVLGHKEQQLKPKSITC
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atggacgcaagtgacaacaaggatggcaagctctctgctgaagtagaaccgtttattcct
cagaagaagggctccgaagcggttttggtctcaatgaatctaactaatggcagtggagaa
gggggcagtgccagcggagtggagcccactcccatccctagttacctgatcacatgctac
ccatttgtacaggaaaatcaaccaaacaggcaattacccttgtataacagtgacatcaga
tggcagcagcccaacccgaacacagctggcccataccttgcatatcctatcctttcatca
ccacagccccctgtttcaaatgactatgcctactaccagattatgcctgcaccgtgcact
ccaatgatgggattttatcaccccttcgcctccccttatggagcccctattcagacagca
ggagtagtcagtgtctccagtgagtgtgctgatcgacccgggcagctcttccaagctgca
aaccagagggggcgaggcatcataaggtcaccactggtgtcaaaggttccacagcaaata
caaacccaaagaccgcctatgagaagtattgctgttcaaaaggagatcagtgcttcaggt
cccgacaacagatcaaagatagtgcttttggtggacgctgcacagcagacagatttccct
ggtgaaatagccaataagtccctctcggaacggactagtcctttgctatggaaaaccaaa
gcaaggcgaagaagagcgtcgcacccggcagcagagtcttccagcgagcacggggccagc
gaggcagacattgacagtgacagcggctactgcagtcccaaacacagccacaatcaggcc
accggcatgggcaccaggacctcagatcccattaataattcagttgtagctgaatcagcc
ggaacaccagctgctagctgggtaaacgtagcctctcaagccactcagaaaacatggatg
gacagaaattcacaatttcttagaggtggaaaaccagccgaacacagaaattatgcccag
gttggatacagaggcagagggcagagcactttgtccgagagaagcctgcaaaggagaccg
ccagattggaagccaccgaatataagccagttaactggtgcacagcaaaccacaaagccc
ttgtattttgagaatgaagatgaatttccagacttggttcctgcagctgctgtttcaagg
actaagactgaaccaatacagccaaaacttcccacgaaccttctggataatttgcctgag
aactctccaatgaacatagtgcagactccaattccgattaccacttctgtacctaaacga
gcgaaaagtcagaggaagaaagcattggctgcagccctggccactgcccaggaatattca
gagatcagcatggaacaaaagaaacttcaggaagccctgacaaaagctgctgggaagaag
agtaaaaccccagtgcagctggatctgggagacatgctggctgctctggagaaacagcag
caggctatgaaggctcgtcagctcaccaacaccaagccactgtcctacacagttggcact
gcagcccccttccatagcaaggattccagcagcaagaagttgatgctgaaaagccagccc
tatactgggcctcataacgtgctggactccactgcccccaggctaaaaagaggaaaggaa
agggaggttcccaaggtgaagaggccaacagcactgaagaagattattctgaaagaaaga
gaagtaaagaaaggcaaatactctcttgaccacagtctcgtggaaccagaagagcagagt
gacctacagttacattttactgatgaccagtccagggaagctgtgtctcaggaagaaatg
ggtcttggcatgcccagcgatgcctctctttcccctgcaagccagaactcgccatacagc
atcactcccgtctctcaaggatcccctgctagttctggaataggaagtccaatggcaaca
tcggccatcacgaaaatacacagcaggcgattcagagagtattgcaaccaggttctgagc
aaggagattgatgagagtgtgaccgtcctgctgcaggaactcgtgcgcttccaggagcgt
atctaccagaaggaccctgcgaaggccaaagccaagagaaggctggtcatgggtctacgt
gaagtgaccaagcacatgagactcaacaaaatcaagtgcgtcatcatctctccaaactgt
gaaaagatccagtcgaaaggtggactggacgaagcactgtacaatgtcatagctatggcc
agggagcaggagattccttttgtcttcgccctggggcgcaaagcattggggcgctgtgtc
aacaaactggttcctgttagtgttgtgggaatcttcaacttcagtggggcagagtgcctg
tttaataaactggtgtcactaacggaggaagctagaaaggcgtacaaagacatggtttca
gccatggagcaggagcaagctgaggaagcgctgaagaatgtgaagaaggccccccaccac
atgggtcattcgcggaacccgtctgcagccagtgccatctccttctgcagtgtcatttca
gagcctatctccgaagtcaatgagaaagaatacgaaacaaactggagaaacatggttgag
acctctgatggactagaagcatcagagaccaagaaggaggagccagctagcaggactgct
gtagcagagaaacctctcctactccacatgtcaaagccgccagcatcgcccctgctacct
cagcctgcaaaaactgctgcagtgagtggtgctgaaaaagatgaagggaaaccagatgac
accctggaatgggcttcccagcagagcactgagactgggtcccttgatggaagctgtcgg
gacctgcttaattcctccataacaagcacaaccagtaccctggtaccaggcatgctggag
gaggacgaggatgaagatgaggaagaggaggaggactataaccacaagcctatatctgtg
gaggtgccactcaccagcaggattgagtcctgggtgacggaggcccagaagaccttggaa
aacctgcagcttggcaaaaaccaggacagcacagaggaagatgatggtggacatagcgat
gaggaagaactagaagcgtccgagcaagcagagcccgttctaggacataaagagcagcag
ctcaaacccaagagcataacctgttga
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