Acipenser ruthenus (sterlet): 117428428
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Entry
117428428 CDS
T07327
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1-like
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117428428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arut04121
]
117428428
Enzymes [BR:
arut01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117428428
Ubiquitin system [BR:
arut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117428428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_UBOX
WWE_5
zf-rbx1
zf-RING_11
zf-RING_2
zf-RING_5
zf-RING_Vps41
PHD_NSD
zf_RING_Vps8_fungal
zf-UDP
zf-RING_16
zf-ANAPC11
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
117428428
NCBI-ProteinID:
XP_034781487
LinkDB
All DBs
Position
12:complement(8643156..8699564)
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AA seq
622 aa
AA seq
DB search
MMLRPGSAMMIHVNGLGYAPQNLARVVVWEWLNEHGRWRPYSAAVCHHIENVLKGDSRGT
VVLGQVEPHLAPYIIDLQSMHQFRQDTGTMRPAQRNFYEPSSAPGKGVVWEWENDSGSWT
PYDMEICVTIQNAYEKQHPWLDLTSLGFCYLIDFNSMTQTNRQSQRKRRLRRRMDLAYPL
TTGSIPKSQSWPVGTSSGQPCSCQQCILVNSTRAASNAILASQRRKVYTGASGAPGTLTL
VRQSNTFAGTTLWSPTSSISSGSAKPEQVQSPATGTTYHRVPALPAPTPASGQNNLNRPG
PQRSALVSTRGSIPPGVPALPVKNLTGSGPVHPALAGMTGILMCAAGLPVCLTRAPKPIL
HPPPINKSDMKPVPGVNGTCRKTKKKHLKKGKNPEDVVKRYMEKVKMVPDEDCTICMERL
TTSSGYEGVLSHKGIKSDLVGKLSKCGHIYHLLCLVAMYNNGNKDGSLQCPTCKAIYGEK
TGTQPPGKMEFHVIPHCLPGYPEFKTIRIVYDIPAGIQGTEHPNPGKKFSARGFPRHCYL
PDLEKGRKVLKLLIVAWDRRLIFTIGTSNTTGESDTVVWNEIHHKTEFGSNLTGHGYPDP
KYLSNVLAELSAQGVTEEGLKD
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgcgtcctggctctgcaatgatgatccacgtgaacggactggggtatgcaccc
cagaacctggcccgggtggtggtgtgggaatggctgaacgaacacggtcggtggagaccc
tacagtgctgctgtgtgccaccacattgagaacgtgttgaagggggactcgcggggcacg
gtggtgctgggccaggtggagccacatttggccccttacatcatagacctgcaatcaatg
caccagtttcgacaggacacaggcaccatgcggcccgcgcagcgtaacttctacgagccc
tcctcggccccggggaagggggtggtgtgggagtgggagaacgacagcggctcctggacc
ccctatgacatggagatctgtgtgactatccagaatgcctatgagaagcagcacccctgg
ttggacctcacctcgctgggcttctgctacctcatcgactttaacagcatgacccagacc
aaccggcagagccagcgcaagaggaggctacgccgcaggatggacctggcctacccgctc
accacgggctccatccccaagtcccagtcctggcctgtcggcaccagctccggccagccc
tgctcctgccagcagtgcatcctggtcaacagcacccgggccgcctccaatgccatcctg
gcctcccagcgccgcaaagtctacacaggggccagtggggcccccgggaccctcactctg
gtcagacagagcaacacctttgccggcaccaccctctggtcccccacctcttcgatcagc
agcggctcggccaagccagagcaggtccagtccccagctacgggaaccacctaccacagg
gtccctgctctccctgcccccacccccgcctctgggcagaacaacctgaaccgaccgggc
ccccagcgctctgccttggtgagcacaagaggatccatcccaccaggggtccctgcactt
cctgtgaagaacctcactggctctggcccagttcacccagcactggcaggcatgaccggg
atcctgatgtgtgcggcgggcctccctgtgtgtctgaccagggctcccaaacccatcctg
caccccccgcccatcaacaagagcgacatgaagcccgtcccgggggtgaacggcacctgc
cgcaaaaccaagaagaagcacctgaagaaagggaagaacccagaggatgtagtgaagagg
tacatggaaaaagtgaagatggttcccgatgaggactgcactatctgtatggagagactg
accacctcgtccggctacgagggggtgctcagccacaaagggatcaagtcggacctggtg
ggcaagctgagcaagtgtggccacatctaccacctgctgtgtctggtagccatgtacaac
aacggcaacaaggacggcagtctgcagtgcccaacctgcaaggctatctatggtgaaaag
acaggcacacagccccctgggaagatggagtttcatgtcatcccccactgcctgcccgga
taccccgaattcaaaaccatccgcattgtctacgatatccctgccggcatccagggcacc
gagcacccaaatccagggaagaagttcagcgccagaggattccctcggcactgctacctg
ccggacttagaaaagggaaggaaggtcctaaagctgttgatagttgcctgggaccgtcgc
ttgatctttaccatcggcacgtccaacaccactggggagtcggacactgtggtctggaac
gagatccaccacaagacggaatttggctccaacctgacaggacacggatacccagacccc
aaatacctgagcaatgtcctggcggaactctccgctcagggagtgaccgaagaggggctg
aaagactga
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