Acipenser ruthenus (sterlet): 117428558
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Entry
117428558 CDS
T07327
Name
(RefSeq) C-myc promoter-binding protein-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arut04131
]
117428558
Membrane trafficking [BR:
arut04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
117428558
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
DUF2464
PPR_3
PPR_long
PPR
Papo_T_antigen
Motif
Other DBs
NCBI-GeneID:
117428558
NCBI-ProteinID:
XP_033903573
LinkDB
All DBs
Position
19:9172506..9209016
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AA seq
1936 aa
AA seq
DB search
MMEDKGFRVADYFVVAGLTDSSKPLEEEIHFNDICHKIAKPKAPITDVAIIIKSLGEEVP
QGYTCVDTTPTGLFADLNNGSLMGPQIFLCYKRGRDKPPLTDLGVLYEWKERLKQGCHII
QTTPSGRPANISSPSSQRIYITYRRAPDSMSQTSLAVTDICIIIPSKGETPPHTFCKVDK
NLNSSMWGSSVYLCYKKSVAKTNTIAYKAGLICRYPEEDYESFPLPESVPLFCLPMGATI
ECWPSETKYPLPVFSTFVLTGSSGEKVYGAAIHFYEPHAQENLTDKQRSQLGLISATNRK
PIVSKTIHTNKCICLLSHWPFFDAFRKFLTFLYRYSISGPHVLPIERHVSHFMHKVPFPS
PQRPRILVQLSPHDNLILSQPVSSPLPLSGGRFTTLLQNLGPENAITLLVFAVTEHKILI
HSLRPAVVTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAPCPFIVGVDSRYFDLYDP
PPDVSCVDLDTNTISHTEDKRALTWKILPKKACKNLMNLLNNIYQELAESQQRPREDGLM
ELSMNDYDFNSGKSLQTLEMEIQEAFLRFMASILKGYRSYLRPITQAPSEKATDASSLFD
LQGFLKSRDRSHQKFYSLMTKTQMFIRFIEECSFVSDKDASLAFFDDCVDKLFSTEHSTD
KGLKVDLDKLEEMRLIELDESQRSEHTVFITPPELPALPDGEEHPLQYSYSGFPVLILEL
FDRPDGLLKTPATRLNSKQSSPTSPTPMFRRTKQEIKSAHKIAKKYSSIPQMWSKCLLRH
CYGLWFICLPAYVKVCHSKIRALRTAYDVLRKMQVKKLEPPDEVCYRVLMQLCGQYGQPV
LAVRVLFEMKKAGVHPNAITYGYYNKAVLESTWPSSTRGGYFLWMKLRNVLLGVVQFRRA
LKKPQSHPPQTPLSADGSDLDAVSHGSLDSSNDTNTAEQAPFSTDLIKVDSTDDRSSTGG
QSDLGYNSLSKEEVRRGDAATQDGPVETEDKKESDSSSLSESESVKGSGDSVPQFDCQEA
ACGFKPPGGIVRVSCPFEAVNESGDTSNDHVAGLMFTTCLEEIGYVQNNSLRKRHKSAVE
GSLKEPMSWGDRNRNLSGDTILGLQMNKRGVVETDTRKMAEKLGADIKILSNAVQTVRPN
TLDIGNGTHRSKAVNRDSPEKDSSDEDAAFEADKIDSPSIFNLEDLDDEPASAGKSVKVA
ARKPRRVERSSSSSSFAARPVEMGFDPLSLFAAQTEQQTEEEEEVRSLSTPSARRELAEE
IEMYMNNMSSPLVSRAPSVDLQRTRDDDPTCIQSPSVEEKNSRRSSLPPSSPRAVGLPRS
RTYHSKTDSKLRDRLWSSPSFSSNSPQRELPPDPEGAVAMSPSSFNLDTLLTPTFDVLKS
SMFSAGKGVAEKASKWYSRFATYSTSSKDLNYDRSSISSGGLIDPESSSLMDDDVYSEYE
GAASPQGNNIAYVAKGVGQSQTSHDSTSKQPHHTGSVLSTGSNFPLPDKSELDSSRYTSN
TSIFQNYAMEVLISSCSRCKTCDCLVYDEEIMAGWTADDSNLNTTCPFCGSPFLPFLNIE
IRDLRGPGRCFLKYGPSVEEGVSTACSTVPNVETRNSVISLADPDMAISPKITVPECLDP
ESRSTRCGCTPAKSIEIPSERKWGVSDSGCAGHPVARSATTFCPLEEDDAPRRNTHSVPT
GSLPSRFSDVADLLSFEWRLHNPDPVTVPYLSPLVLWKELESLLENEGDHVITVADFVDH
HPIVFWNLVWYFRRLDLPSNLPGLILSSEHCNRGSKVPRNWLSEDSKHVLIQILWDNLKL
HQDPGQPFYILWNTHSVKYPMVDSVQKGEEPFNEEFLQSVVKSIQMNDVYRPMSQILEIL
GKQLGMKRQRSLYREILFLSLVALGKDNIDIDAFDREYKMAYDRLTPSQVKFTHNCDRPP
STGVMECRKTFGEPYL
NT seq
5811 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagacaaaggctttcgtgttgccgattactttgtggtggcgggtttgaccgat
tcatccaaaccactcgaagaggaaatccacttcaatgacatctgccacaagatcgccaaa
cccaaagccccgatcacagacgtggccatcatcattaaatcgctaggagaggaggtgcca
caaggctacacatgtgtggacacgactccaacaggactgtttgcagatctcaacaatggc
agcctcatgggaccccagatcttcctgtgctacaagagaggcagggataaaccacctctc
actgatcttggggttttgtacgagtggaaggaaagactcaagcagggctgtcatattatt
caaaccactccttccggacgccctgctaatatcagcagcccctcatcacagaggatatat
attacttaccggcgcgccccagacagcatgtctcagacttccctggccgtgacagacata
tgtataatcattccaagtaaaggagagaccccgccacacaccttctgcaaggtggacaaa
aacctcaatagtagcatgtggggctcgtctgtatatctttgttacaagaagtcggtggca
aagaccaataccatagcatataaagctggtttaatttgcaggtatccagaagaagactat
gaatcattccctttacctgaatctgtgcctctcttctgcctgcccatgggtgcaacaatc
gaatgctggccttccgaaaccaaatacccactccccgttttctctacatttgtattgact
gggtcttctggagaaaaggtgtacggtgctgcaatccatttctatgagccccacgcgcag
gagaacctcactgacaaacagcgctcccaactgggactgatcagcgccaccaatcgcaaa
cccattgtctccaaaaccatccacaccaacaagtgcatatgtctgctctcccactggcct
ttctttgatgcctttaggaagtttctgacattcctgtaccgatactcgatctccggccct
catgtactacccattgagagacatgtatcccatttcatgcacaaagttccttttccgtcg
cctcaaaggccgagaatcttggtgcagctgtcgccacatgataacttgatactgagccag
cctgtatcatcaccattgccgcttagtggtggcaggttcactaccctgctgcagaatctc
ggccctgagaatgcgatcacgctgctggtgtttgcagtcacagaacacaagatcctgatc
cactcgctcaggccagccgtggtcacaagcgtgaccgaggcattggtctctatgattttc
cctttccactggccctgcccgtatattcctctttgtcctttggcattagcagatgtgctg
agtgccccttgcccgttcatagtcggggtcgattcgagatactttgatctgtatgatccg
cctccagatgtcagctgtgttgatctggacactaacacgatatcacatactgaagataag
agggctttgacctggaagattctgccaaagaaggcttgcaaaaatctgatgaatttattg
aataacatttaccaggaactagcagaatcacaacagagaccaagagaagatgggttgatg
gagttaagcatgaatgactatgattttaactctgggaagagtctgcaaaccctggaaatg
gagatacaggaggcattcttgcgcttcatggcctcgatattgaagggataccggtcatac
cttcgtcccattacacaggccccctctgagaaagcaactgatgctagctctctgttcgac
ttgcaaggcttcctgaagagtcgggatcgctctcaccagaagttttactcgctgatgacg
aagacgcagatgtttattcggtttattgaagagtgttccttcgtcagcgacaaggatgca
agtctggcatttttcgatgattgtgtagataaactgttcagcacagagcacagtactgat
aaaggactaaaggtggacctggacaagctggaggagatgcgtctgattgagctggacgag
tcccagcgcagtgagcacaccgtgttcatcacccccccagagctgccagctctgcctgat
ggagaggagcaccctctgcagtacagctacagtggctttcctgtgctgatcctggagctg
tttgatcgtccggatggtttgctgaagaccccggctaccagactgaactcgaagcagagc
tctcccactagccccacacccatgttcaggaggactaaacaggaaatcaagtcagcccac
aaaattgcaaaaaagtactcgtccataccacagatgtggtccaagtgtctcttgcgacac
tgctacggcttgtggttcatctgtctgcctgcgtacgtcaaagtgtgtcactcaaagatc
agggctctgagaacggcatacgatgtgctgagaaaaatgcaagtcaagaaacttgagcct
cctgacgaggtgtgttaccgagttctgatgcagttgtgtggacagtatggtcagccagtt
ttagcagttcgggttctttttgaaatgaagaaggctggtgttcaccccaatgctattaca
tacggttattataacaaggctgttttagaaagcacttggccttccagtactaggggtggt
tactttctctggatgaaattgagaaatgtccttctaggagttgtgcagttcagaagagcc
ttgaaaaagccccagtcacaccccccgcagacccctctctcagcagatggcagtgacctg
gatgctgttagtcatggcagcttggatagctctaacgacactaacacagcggaacaggct
ccgttcagcactgatttaatcaaagtagattctactgatgatagatctagcacaggtggt
cagtctgaccttgggtacaactctctgtcgaaagaggaggtgaggcggggtgacgctgct
acacaggatggtccagtggagacggaggacaagaaggagagcgactccagctcactttca
gaaagcgagagtgtaaaggggagtggtgactctgttcctcagtttgattgtcaagaagca
gcctgtggatttaaacctcccgggggaatcgtccgtgtcagctgcccttttgaggcagtc
aacgagtcaggcgacacgagcaatgatcatgttgcaggacttatgttcaccacctgttta
gaggagattggctatgttcaaaacaacagccttcggaagagacacaagagtgccgtggaa
gggagtttgaaggaaccaatgagctggggagaccggaaccgcaacctcagtggagacaca
atcctggggctgcagatgaacaaaaggggggttgtggagactgacaccaggaagatggct
gagaaactgggagctgacatcaagatcctttcaaacgctgtccagaccgtgagaccgaac
actctggacattggaaacggcacccacaggtcaaaagctgtaaaccgagacagtccggag
aaggactccagcgacgaagacgcggctttcgaagctgataaaatagactcgccctctatc
ttcaacctagaggaccttgacgacgagccggccagcgctgggaagtctgtgaaagtggcg
gctcggaagccacgcagggtggagaggtccagcagcagcagcagctttgcagccaggccg
gtcgagatgggcttcgaccctctctccctgttcgcagcccagacggagcagcagactgag
gaagaagaggaagtgaggagcctctccaccccctccgcacggagagaactggccgaggag
atcgaaatgtacatgaacaacatgagcagccccctggtcagccgtgcccccagcgtggac
ctgcagaggacgagggacgacgaccccacctgtatccagagcccctccgtggaggaaaag
aactccaggaggtccagccttcccccaagctcccccagagctgtggggcttccccgctcc
aggacctatcactccaagacagacagcaagctaagagataggctgtggtcgtctccctcc
ttctcatcgaacagcccgcagagggagctgcctccagaccccgaaggagcagtggcgatg
tccccgtcgtcttttaatctggacaccttactaacacccacctttgatgtgctcaagagc
agcatgttttcagccgggaaaggagtagcagaaaaagccagcaagtggtattccagattt
gctacctactccacttcttctaaggatctcaattacgacagatctagcatatcatctggt
gggttgatagaccctgagtcctcttcattgatggatgatgatgtctacagtgaatatgaa
ggggcagcgtcccctcaaggaaacaacattgcatacgtggctaagggggtgggacagagc
cagacgtctcacgacagcacttcaaagcaaccacatcacacaggtagtgtactgtccaca
ggctccaacttcccattgcctgacaagtcggaactggattcgtctcgttacaccagcaac
accagtatatttcaaaattatgccatggaggtcctcatttcaagctgctcacgctgtaag
acctgcgactgtctggtctatgatgaggagatcatggcaggatggactgcagacgactcc
aacctcaacaccacctgtcccttctgcgggagtcccttcctgcccttcctcaacatcgag
atccgagacctccggggacccggcaggtgttttttgaagtacggcccatctgtggaggaa
ggcgtgtccacagcctgctctacggttcctaacgtggagacaaggaattctgtcatctcc
cttgctgacccagacatggctatctctccgaagatcacagtaccggaatgcctagatccc
gaaagtagaagcactcgctgtggatgcacccctgctaagtccattgagattccctcggag
aggaagtggggtgtcagtgattcgggctgtgcggggcaccccgtggctcggagcgccact
accttctgtccactggaggaggacgatgccccccgaagaaacacccacagtgtacccaca
gggagcctgccctccaggttcagtgatgttgcagatcttctgagctttgaatggaggcta
cacaatccagacccggtcacggttccctatctcagtcctctcgtactgtggaaagaactg
gaaagcttgctggaaaacgaaggggatcatgtgataacggtggcagacttcgtggaccat
catcccattgtgttctggaatctggtgtggtatttcagacgacttgatctgccaagcaat
ttgccaggcttaatactgtcctctgaacattgcaacagagggtcaaaggttcctcgaaac
tggttgtcagaagatagcaaacatgttttaatccagattctgtgggacaatcttaaacta
caccaggatccaggacagccgttctacatcctgtggaacacgcacagtgtgaaatacccc
atggtagactctgttcaaaagggagaggagcccttcaatgaagagttcttgcagagcgtg
gtgaagagcattcagatgaacgacgtctatcggcccatgagtcaaatcttagagattcta
ggtaaacaactgggcatgaaaagacagagaagcttatacagagaaatcctgttcctttct
ctggttgcccttggaaaagacaacattgatattgatgcatttgatagagagtacaagatg
gcctatgatcgtctgactcccagccaggtgaagtttacacataactgtgatcgtcctccc
agcactggagtcatggagtgccgcaagaccttcggagaaccgtatctgtaa
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