Acipenser ruthenus (sterlet): 117428916
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Entry
117428916 CDS
T07327
Name
(RefSeq) ubiquitin-60S ribosomal protein L40 isoform X1
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03010
Ribosome
arut04120
Ubiquitin mediated proteolysis
arut04137
Mitophagy - animal
arut04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
117428916
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117428916
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117428916
04137 Mitophagy - animal
117428916
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
arut03011
]
117428916
04121 Ubiquitin system [BR:
arut04121
]
117428916
Ribosome [BR:
arut03011
]
Ribosomal proteins
Eukaryotes
Large subunit
117428916
Archaea
117428916
Ubiquitin system [BR:
arut04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
117428916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
Ubiquitin_5
DUF2604
Rad60-SLD_2
TBK1_ULD
Plexin_RBD
OTU1_UBXL
UBL_UBAC1
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
117428916
NCBI-ProteinID:
XP_033903838
LinkDB
All DBs
Position
39:complement(6951757..6955606)
Genome browser
AA seq
159 aa
AA seq
DB search
MFPFPSFLPFPSGLAVDRVCISTLLQPAVATMQIFVKTLTGKTITLEVEPSDTIENVKAK
IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRMLAQKY
NCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKLK
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgtttccgtttccgtcattcctccctttcccttctggcttggcagtcgaccgggtgtgt
atctccactctgctgcagcccgctgttgccacgatgcagatctttgtgaaaaccctaacg
ggtaaaactatcaccctcgaggttgagcccagtgatactattgagaatgtgaaggccaag
atccaggataaggaaggtattccccctgaccagcagcgtctgatctttgctggcaagcag
ctggaagacggacgcacgctgtcagactacaacatccagaaagaatccaccctgcatctg
gtcctgcgtctgcggggaggcatcattgagccttctcttcgtatgctggctcagaagtac
aactgcgacaaaatgatctgccgcaagtgctacgcccgtcttcaccctcgtgcagtgaac
tgccgcaagaagaagtgcggacacaccaacaacctgcgccccaagaagaagctgaagtaa
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integrated database retrieval system
