Acipenser ruthenus (sterlet): 117428927
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Entry
117428927 CDS
T07327
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2
KO
K04955
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
Organism
arut
Acipenser ruthenus (sterlet)
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
arut04040
]
117428927
Ion channels [BR:
arut04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
117428927
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Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
117428927
NCBI-ProteinID:
XP_033903851
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Position
39:3924828..3953847
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AA seq
1146 aa
AA seq
DB search
MSWIKKDVSAGVTDSMKKKGSRSGASSTVAAAAASPGCFAFATAAIHSGLGSKPGAGGSA
SVMDEEEEGEEEPGLQPQPRRGDGRGSGGGDSIRLRNIIPGGGAAPAASNSSSNNKLCLL
QGEGAASSAASLAASRTTPACQGDAVGCAGGVGGRGGGGDSTTAVLAAAAETSTSRSNSA
ASTSTKCNKNGDCIRDQSTGSLSSIISKQDRQQGRGGGGEERKKQGASPKTSVTSMEGAT
TTTTTTTTASSLNQGQGDEQPPAPAIVPEKREPKVSFSNAPSRKASSSVYGQNQSQAPPQ
PQQDDQPRNSVTVLKSDEFAQILADDGDPGGSQGSFMQRQFGAMLQPGVNKFSLRMFGSQ
KAVEKEQERVKSAGAWIIHPYSDFRFYWDFTMLLFMVGNLIIIPVGITFFKDETTAPWII
FNVVSDTFFLTDLVLNFRTGIVNEDNTEIILDPRKIKKKYLKTWFVVDFVSSIPVDYIFL
IVERGIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVMR
IFNLIGMMLLLCHWDGCLQFLVPMLQEFPSDCWVSLNKMVNDTWSELYSFALFKAMSHML
CIGYGRQAPESMSDIWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQY
MSFHKLPADFRQKIHDYYEHRFQGKMFDEESILEELNEPLREEIVNFNCRKLVASMPLFA
NADPNFVTAMLTKLRFEVFQPADYIVREGTIGKKMYFIQHGVVSILTKGNIGMRLSDGSY
FGEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVAIDRLDRIGKK
NSTLMHKVQHDLSSGVFNNRENEMIQEIVKYDREMVQRVELQRPRAMSMTPPLHGAMFGY
PGQPQSSSAIATLQQAVAMSFCPQMVSPLVGPGVLQSPRMVRRFQVVQSISSPVSVSPLQ
SQQMSAGALASAVSSPPVQSPLAAGGRTFQYSSSPGQSGSQLSLVQQRAPSPPQRPAAHK
STQALHTGSLSQEARLLSASQPSLPQNGFQAAAAPSPPQSTRVSSTSIGPPQVHPGTPGS
SGLRGPQRAVLPHQMSVGLGGVIYPSTPPPAGASPMGHQDSGTPKKDSVVSIPDTDLVKS
RLSSNL
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgtcatggataaaaaaagacgtttctgctggagttacagatagcatgaaaaagaaaggg
agccgcagcggcgcctcttccaccgtcgctgctgccgctgccagccccggctgctttgcc
tttgctaccgctgccatccactcgggattgggttcgaaaccgggcgcaggcggcagcgct
agtgttatggacgaggaggaggaaggcgaggaggaacccgggctgcagccgcagccacgc
cggggagatggccgaggcagtggcggtggagacagcatcagactgaggaacatcatacca
ggagggggagccgcgccagcagcgagcaacagctccagcaacaataagctgtgcctcttg
caaggcgaaggagctgcgtcgagtgctgcctctcttgctgcttctcgcacgacccctgct
tgccagggtgatgctgttggctgtgctgggggagttggtgggagagggggaggaggggac
tcaaccacagctgtgctagcagcggcagccgagaccagcactagcaggagtaacagtgcc
gctagcacgagcacgaaatgcaacaaaaacggagactgcatccgagatcaaagcaccggg
agcttgtcttccatcatctctaagcaggacaggcagcagggaaggggtggaggaggagaa
gagagaaaaaaacagggtgcttcccccaaaaccagtgttaccagtatggaaggggcgacc
accaccaccactactaccaccactgcatcctcattgaatcagggtcagggtgacgagcag
ccccctgcccccgctattgtcccggagaaaagggaacccaaggtgtccttttccaatgcg
ccaagcaggaaagcgtcctcgtccgtgtacggccagaatcaatcgcaggcgccaccgcag
cctcagcaggacgaccagcccaggaattctgtcaccgttctcaaatccgacgaattcgcc
cagatcttagccgacgatggggatccaggaggcagccaggggagcttcatgcagcggcag
ttcggggccatgctgcagcccggagttaacaaattctccctgcggatgttcgggagccaa
aaggcggtggagaaggagcaggagcgggttaaatccgccggggcttggatcatccacccg
tacagcgatttcaggttctactgggacttcacgatgctgctgttcatggtggggaacctc
atcatcatccccgtggggatcaccttcttcaaagacgagaccaccgcgccctggattatc
ttcaacgtggtctcggataccttcttcctcacggacctggtgctgaacttccgcacgggc
atcgtcaacgaggacaacaccgagatcatcctggacccccggaagatcaaaaagaagtac
ctgaagacctggttcgtggtggactttgtctcctccatccccgtggattatatctttttg
atcgtggagagggggatcgactccgaggtctacaaaacggcccgggcgctgaggatagtc
cgcttcaccaagatcctcagcctcctgagactgctgcgtctctccaggctcatccgatac
atccaccagtgggaagagatcttccacatgacctatgacctggcgagtgcagtgatgcgg
attttcaacctgatcggcatgatgctgctgctgtgccactgggatgggtgcctgcagttt
ctcgttcccatgctccaggaattccccagtgactgctgggtctccttgaacaagatggtg
aacgacacgtggagtgagctgtactccttcgcactcttcaaggccatgagtcacatgctg
tgcatcggctacggccggcaggcgcccgagagcatgtctgatatctggctcaccatgctc
agcatgatcgtgggtgccacctgctacgccatgttcatcggccacgccacggcgctcatc
cagtccctcgactcctcccgccggcagtaccaggagaagtacaagcaagtggagcagtac
atgtccttccacaagctgcctgccgacttccgccagaaaatccacgactactacgagcac
cgcttccaggggaagatgtttgatgaggagagcatcctggaagaactgaacgagccgctg
agagaggaaatcgtgaactttaactgccggaagctggtggcgtcgatgcccctgttcgcc
aacgcggaccccaacttcgtgacggccatgctaaccaagctgcgcttcgaggtgttccag
cccgcggactacatcgtccgagagggcaccatcggcaagaagatgtacttcatccagcac
ggcgtggtcagcatcctcaccaagggcaacatcggcatgaggctctctgacgggtcctac
ttcggagagatctgcttgctgacacgaggacgccgcacagccagcgtccgggctgacacg
tactgccgcctctactccctctccgtggacaacttcaacgaggtgctggaggagtacccc
atgatgaggagagccttcgagaccgtggccatcgatcgactcgaccgcataggtaagaag
aactccaccctgatgcacaaggtgcagcacgacctcagctcgggcgtcttcaacaaccgc
gagaacgagatgatccaggagatcgtaaagtacgaccgcgagatggtccaacgggtggag
ctgcagcggcccagggccatgtccatgacgccccccctccacggggcaatgttcggctac
cctggtcagccccagagcagctctgccatcgccacgctgcagcaggccgtagccatgagc
ttctgcccccagatggtcagccctctcgtggggccgggggttctccagtccccccgcatg
gtccggcgcttccaggtggtgcagagcatctccagccccgtctcggtgtctcccctccag
tcccagcagatgtcagccggggccttagcttcggccgtctccagcccgcctgtccagagc
cccctggcggctggagggcgaactttccagtacagctccagccccggccagtctggttcc
cagctctccctggtccagcagcgtgcccccagccctccccaacgcccagccgcccacaag
agcacccaagccttgcacacgggcagcttgagccaagaggccaggctgctctccgcttcc
cagccctccctcccccaaaacgggttccaggcagcagcagcccccagcccaccacagtcc
acccgggtgtcgtccacctccatcggccccccgcaggttcaccctggcaccccgggctcc
tccgggctcagggggccccagagggcagtcttgccccaccagatgtcagtagggctaggg
ggggtcatctacccctctacaccgccccctgctggggcttcacccatggggcaccaggac
tcaggaacacccaagaaggattcggtggttagcatcccagacacagacttggtcaaatct
aggctctcttccaatttgtga
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