Acipenser ruthenus (sterlet): 117428943
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Entry
117428943 CDS
T07327
Name
(RefSeq) rho guanine nucleotide exchange factor 18-like
KO
K21066
A-kinase anchor protein 18
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117428943
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arut04131
]
117428943
Membrane trafficking [BR:
arut04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
117428943
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
C1_1
PH
PH_13
SOS1_NGEF_PH
DUF7239
Prok-RING_1
C1_2
PHD_2
PHD
Motif
Other DBs
NCBI-GeneID:
117428943
NCBI-ProteinID:
XP_033903879
LinkDB
All DBs
Position
39:complement(2574020..2622472)
Genome browser
AA seq
1536 aa
AA seq
DB search
MSPPSIAEDVFFGMTEEKDDSSGDTDSEDHTLDLNSSIEDLLSLNPSLQGTEYFKDLEIH
LTGGTNAMQEMTTSVNSCPCNKPQKNNGRCFQHDNGSNSCPGSLSYQESSKGTREPLQTT
DTQDLCAHADRQGDCSLVNTVKYLGDLDDKVDKDTEPETFPILLRTLSSSRRHSWEYPVS
PVDPGKRFSLDASAMDSDGEQGDADPSQLTESFTLPEGGPAGPINTAEEKDPPQESPNPK
AKDGSDLEDASKRLRSKSVVHLSEKVGTVRLSRSLEDWFPAPEGTEQKAREESETTPEEQ
NRMLMVTQVLQELKHYHGAKQRQKTEGKASSSQNLTWYEFLSNANEEEDKTDKVEKGTKV
KRRLSSLRSRVAGSFQKDKGKNREKEQQKEKEKEREKEKEKEPKEKMRMRNGHQLVPGTF
SSCTTCTLCSKTLQRKPGLQCMNCGVNVHKSCKNLLGECSSSSSSSKLKRDSLRNPTPGS
PQSTGHNHSQAGSFLKEQSRSAVSGPDGSCASSRSPGMTITQRGSNTQLTTSTAANHANT
YGSITGEMEEIDGFIKLKQQSEDAVSLAPSTAESIVVEDAQYASLRGELELDAQDIEAES
WSLAVDPAYLKKHPKEAVKRQDVIHELIQTEMHHVRTLKIMLNVYVRGIRENLQMDDSKV
EKIFPCVENLLEIHRRFLSRLKERRKESLEEGSDHNYVIHRIGDILVSEFSGEIGERMKE
SYGDFCSHHSEAVNYYKELLQNNKKFQNLIRKINNLSIVRRLGVPECILLVTQRITKYPV
LVERIIQNTEVGSEDHEELTRALGLIKDAITQVDAKVNDYENKTRLKDIASKMEPKSSGK
FKDGRLFGKEEILKGRRRLLHEGMVYWKAASGRLKDILAVLLTDVLLLIQEKDQKYTFAT
VDSKPSVISLQKLIVREVAHEEKAMFLICASSAEPEMYEIHTTSKEERNTWMNLIRQAAE
SCPDVEEGVSSDPEEERRLAEARALKLKEFQERLISKDRQIVQSLSEKLQIFTEISEVMS
GLEDSTQGARSRLLVRGDPSDTLLGEQLLKDAIAEVENLQNLLISHGRDVSWQPEDGLGS
SGLPRRAETFGGYESSPTVMNKNGSMKKKSYTVSYTGEHKLRERRGQLTSCDPELQDLWG
DEGAQQMADEVPEKSWHNVWSPPFHESEFIQSVQTLSQLLYSLQAIIAQQDSYMELQRAS
LPDRDRQNRLRGNGLLEQEKQRNFEKQREEMANFQKLQSQLRLEQQRWERDREKQRRLAE
VEEDRLKGREEECRQLQDRLRMEHEELEKQREKYQQDLERLRESTRTVEKEKERVEQQKY
NLTKLKTMSFAPDASQGHNQSHSISFNGDGFLNSEGALQLPVKPQGRSSQSVAGADYMQR
PEVLLRRENSTAESRPLLPIKSEVPIHLISTTNQLHKQTGVQQRIPTKLALLSSKGKEKG
SRGKGSHRTESAAADLRQLLPLRLSGKEDGTLKTKRSCSPNQNFQQEPVSPPDNHSDATH
LSPHGMQKQNSQGSLQTPSPQPSIAEEMTKEDVIFF
NT seq
4611 nt
NT seq
+upstream
nt +downstream
nt
atgtcccccccgtccatcgcagaggacgtcttcttcggcatgactgaggaaaaggatgac
tcttcaggtgatacagattctgaggaccacactctggatctcaacagcagcatcgaggac
cttctctcgctaaacccctcccttcaggggacagaatatttcaaagacctggagatccat
cttactggaggaaccaacgccatgcaggaaatgaccacgtctgtgaacagctgcccgtgc
aacaagccacagaagaacaatggacgctgtttccagcacgataacggcagtaactcttgc
ccgggctccttgtcttatcaagagagttccaagggcaccagggaacccctgcaaaccacg
gacacacaggatttatgtgcccacgctgacagacaaggtgattgctctctcgtcaataca
gttaaatacctgggggacttggacgacaaggtggataaagacactgagcctgagacattc
ccaatacttctgaggactttgtctagctcacggagacacagttgggaataccctgtatcg
ccagtggacccagggaaaaggtttagcctggatgcgtctgccatggacagcgatggggag
caaggggacgcagacccatctcagctgacagagtccttcaccttaccagagggaggccca
gcgggaccgatcaacactgcagaagaaaaagatcccccgcaggagtctcccaaccccaaa
gcaaaggatggatcggacctggaagatgctagcaaaaggctcaggtcaaagtcggtggtg
catttgtcagaaaaagttggtacggtccgtctctctcgaagtctcgaggattggtttcca
gctcctgaaggaacagaacaaaaagccagagaggaaagtgaaacaactcccgaagagcag
aatcgcatgctgatggtaacacaggtgttgcaagaactaaagcattaccacggagcaaag
cagaggcagaagacagaaggaaaagcatcatcttcgcaaaacctgacctggtacgaattt
ctctctaatgcaaatgaagaagaggacaagacagacaaagtggagaaaggaaccaaagtg
aaacgaaggctgagctctctgaggagcagagtagcaggctcctttcagaaagacaagggt
aagaatcgagaaaaagagcagcaaaaggaaaaagaaaaggaaagggagaaagagaaggaa
aaagagccaaaagaaaagatgcgaatgagaaacgggcaccagctggtgccgggcacgttc
tccagctgtaccacgtgcacgctgtgcagcaaaacactgcaaaggaagcctgggcttcag
tgcatgaactgcggcgtgaatgtccacaagagttgcaagaacctgctgggtgaatgcagc
agcagcagcagcagcagtaaactcaagagagattccctgagaaacccgactcccgggtct
ccgcagagcacaggacacaatcacagtcaagccggctcgtttctgaaggaacagtcacgg
agtgccgtctcgggtcctgatggctcctgtgcttcctcgcgcagtccaggcatgaccatc
acacaacggggaagcaacactcagctcacaaccagcaccgctgctaaccacgccaataca
tacggatcaatcacaggagagatggaagaaatagatgggtttataaaactaaagcaacag
tcagaagatgctgtctctctggctccgtccacagcggagtccattgtagttgaagatgca
caatatgcatctctcaggggggagctggaattagatgcccaggatattgaagcagaatcg
tggagcctggctgtcgacccagcgtacttaaagaaacacccgaaggaggcggtgaagaga
caagatgttatacatgagttgatccagactgagatgcaccacgtccggacgctgaagatc
atgctgaacgtctacgtgcgaggaatcagggagaacctgcaaatggacgacagcaaggtg
gagaaaatcttcccttgcgtcgagaacctcctcgaaatccacagacggttcttatcccgg
ctgaaggaaaggcggaaagaatccttggaggaagggagcgaccacaactacgtcattcac
aggataggagatatcctggtgtcagagttttctggagagattggagagagaatgaaggaa
agctatggagatttttgcagtcatcacagtgaagccgtcaactattataaagaactgcta
cagaataacaaaaagttccagaacttgattaggaaaattaataacctttctatagtaagg
agactaggagtgccggagtgtatcctgttggtcactcagcgcatcacaaagtatcctgta
ttggtggaaagaattatacagaacacggaagttggttcagaagaccacgaggagctgacc
cgagctttgggccttattaaagacgccatcacacaagtagatgccaaagtcaacgactac
gagaataaaactaggcttaaagacattgccagcaaaatggagcccaaatcttctgggaaa
ttcaaagacgggcgcttattcggcaaggaggagatactgaaggggagacgacggctcttg
catgaaggaatggtttattggaaagctgcttcggggcgtcttaaagatattctggctgtg
cttcttactgatgtacttttgttaatacaagaaaaggaccaaaaatatacatttgctact
gtggatagcaaaccgtcggtgatctccctgcagaagctaattgtgcgagaagtggcccac
gaggagaaagcgatgttcttgatatgtgcctcctcagcagagccagagatgtatgaaatt
cacaccacctccaaagaggagcgcaacacctggatgaacttgatccgccaggcggcagaa
agttgtcctgatgtagaggaaggagtttcaagtgacccggaggaagaacgcagactggct
gaggcacgagcccttaaattaaaagaattccaagagcgcctgatttctaaagacagacag
attgtgcagagcctcagtgagaagctgcagatcttcactgagatctcagaggtgatgagc
gggcttgaagactcgactcagggggcccgctcccggctgctggtgcgtggagacccctct
gacacgctgctgggggagcagcttctcaaggatgccatcgctgaagttgaaaatcttcag
aacctgctgatttcccatgggagggatgtgagctggcaacctgaagacgggctggggtcc
tcggggttaccacggcgggcagagacgttcggaggatatgaatccagtcccaccgttatg
aataaaaatggcagcatgaagaaaaagtcttacactgtgtcttacactggggaacacaag
ctgagagaaaggagaggccagctgacaagctgtgaccccgagctgcaggacctgtggggc
gatgaaggagcacaacaaatggctgatgaagtaccagaaaaaagttggcataatgtgtgg
agccctccctttcacgaatcggagtttattcagagtgtgcagaccttgtcacagctgctt
tacagtcttcaggccatcattgcgcaacaagacagctacatggagctccagcgtgcatcg
ctgccggaccgggacaggcagaaccggctgcggggaaacgggctgctggagcaggagaag
cagcgcaacttcgagaagcagcgggaagagatggccaacttccagaagctgcagagccag
ctgcgtctggagcagcagcgctgggagcgcgaccgggagaagcagcggcggctggccgag
gtggaggaggataggctgaaggggcgcgaggaggagtgccggcagctccaggatcggctc
cggatggagcacgaggagctggagaagcagcgggagaagtaccagcaggacctggagcgt
ctgcgggagtccacgcggaccgtggagaaggagaaggagcgggtggagcagcagaagtat
aatctgacgaagctcaagaccatgtcctttgcaccagacgcatcgcagggccataaccag
agtcattccatcagttttaatggagatgggttcctgaacagcgaaggcgcccttcagctg
cctgtgaagccacagggccgttcaagtcagtctgtggcaggggcagattacatgcagcgg
cccgaagtcttactgaggcgagagaacagcacggcagagtcccggcccttgctccccatc
aagtccgaggtgcccatccacctgatcagcaccaccaaccagctccacaagcagactggc
gtgcaacaacgcatccccaccaagctggccctcctctcctccaagggtaaagagaagggc
agcagaggcaagggatcccacaggacggaaagcgcagctgcagacctgaggcagttgcta
cccctcagactgtctggaaaggaggatggtactttaaaaaccaagaggtcttgtagccca
aaccaaaacttccaacaagaaccagtaagccctccagacaaccattccgatgccactcat
ctgtccccacacggtatgcagaaacagaacagccagggatcgctgcagaccccctcccca
cagcccagcatcgccgaggagatgaccaaggaggacgtcatctttttctaa
DBGET
integrated database retrieval system
