Acipenser ruthenus (sterlet): 117428979
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Entry
117428979 CDS
T07327
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
arut
Acipenser ruthenus (sterlet)
Pathway
arut03018
RNA degradation
arut03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
arut00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117428979
09123 Folding, sorting and degradation
03018 RNA degradation
117428979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arut03019
]
117428979
03041 Spliceosome [BR:
arut03041
]
117428979
Messenger RNA biogenesis [BR:
arut03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117428979
mRNA degradation factors
5'-3' decay
Lsm complex
117428979
Spliceosome [BR:
arut03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
117428979
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
InhA-like_MAM
RimP_C
Motif
Other DBs
NCBI-GeneID:
117428979
NCBI-ProteinID:
XP_033903944
LinkDB
All DBs
Position
40
Genome browser
AA seq
103 aa
AA seq
DB search
MADKEKKKKESIFDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDD
QFKLTEDTRQLGLVVCRGTSVVLISPHDGMEAIPNPFVQQQDG
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaagagaagaagaagaaggagagtatatttgacttgtcgaaatacatcgat
aagaccattcgagtgaagtttcagggtggacgagaagccagtgggatcctgaaagggttt
gaccccctgttgaacctggtgctggacggcactattgagtacatgagagaccctgatgat
cagttcaagctgaccgaggacaccaggcagctggggctggtggtgtgcagagggacctct
gtggtgctcatcagccctcacgatggcatggaggcaattcctaaccccttcgttcagcag
caggacggttag
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