KEGG   Acipenser ruthenus (sterlet): 117429097
Entry
117429097         CDS       T07327                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
arut  Acipenser ruthenus (sterlet)
Pathway
arut03030  DNA replication
arut03410  Base excision repair
arut03420  Nucleotide excision repair
arut03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:arut00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    117429097
   03410 Base excision repair
    117429097
   03420 Nucleotide excision repair
    117429097
   03430 Mismatch repair
    117429097
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:arut03032]
    117429097
   03036 Chromosome and associated proteins [BR:arut03036]
    117429097
   03400 DNA repair and recombination proteins [BR:arut03400]
    117429097
DNA replication proteins [BR:arut03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    117429097
  DNA Replication Termination Factors
   ELG1-RFC complex
    117429097
Chromosome and associated proteins [BR:arut03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    117429097
DNA repair and recombination proteins [BR:arut03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     117429097
  Check point factors
   HRAD17(Rad24)-RFC complex
    117429097
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 AAA_lid_RFC1 nSTAND_NTPase5 AAA_14 RCF1-5-like_lid AAA_16 Viral_helicase1 Mg_chelatase AAA_11 Rad17 RuvB_N AAA_19 AAA_24 AAA_assoc_2 MipZ nSTAND3 AAA_18 AAA_5 ABC_tran AAA_28 AAA_25 DNAX_ATPase_lid AAA_23 SLFN-g3_helicase AAA_30 MeaB NTPase_1 AMP-binding_C_3 RNA_helicase FtsK_SpoIIIE IstB_IS21 bpMoxR
Other DBs
NCBI-GeneID: 117429097
NCBI-ProteinID: XP_033904168
LinkDB
Position
Unknown
AA seq 355 aa
MEVEMKETGASETEERQPKKDSASSAAGKGTSGAYEMPWVEKYRPLKLNEIVGNEETVSR
LAVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPAMKDAVLELNASNDRGIDVVRNK
IKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIE
PIQSRCAVLRYTKLTDAQVLARLMEVVEKEKVQSTDDGLEAVIFTAQGDMRQALNNLQST
NSGFGYVNSDNVFKVCDEPHPLLVKEMIQHCVNANIDEAYKILAHLWKLGYSPEDIIGNI
FRVCKTFQMPEYLKLEFIKEIGYTHMRVAEGVNSLLQMAGLLGRLCAKTASPAAS
NT seq 1068 nt   +upstreamnt  +downstreamnt
atggaggtggaaatgaaagagactggtgccagcgagacggaggagaggcagccaaagaag
gactcggcaagctcggcggccgggaaagggacgagcggcgcatatgaaatgccatgggtg
gaaaaatacagaccattaaagctgaacgaaatagtggggaatgaagagacagtcagcagg
ctagcggtgtttgcaagagaaggcaatgtacctaacattatcattgcaggtcctccaggc
actggtaagacgaccagtatcttgtgtctggcccgggcgctgctgggtcctgccatgaag
gatgcggttctggaactcaatgcctccaatgacagaggtattgacgttgtaagaaacaaa
atcaagatgtttgcccagcagaaggtgacgctgccgaaagggcgacacaagatcatcatc
ctggatgaagcggacagcatgacagatggagcccagcaagccctcaggagaacaatggag
atctactctaaaacaacccgctttgcattagcctgtaatgcctcggacaagatcatagag
ccaatccagtcccgctgcgcagtgctgcgctacaccaagctgacagatgcgcaggtcctg
gcccggctcatggaggttgtagagaaggagaaggtgcagagcactgatgatgggctggag
gccgtcatcttcacagcgcagggggacatgagacaggcattgaacaatttgcagtctaca
aattctggatttggctatgtcaacagtgacaatgtgtttaaggtctgtgatgagcctcac
cccctactcgtgaaagagatgattcaacactgtgtgaatgctaatatcgacgaggcttac
aagattcttgcccatctttggaagctgggttactcccccgaagatatcatcggaaacatt
ttcagagtttgcaaaaccttccagatgcccgaataccttaaactggagttcatcaaggag
atcggctacacccatatgagggtggctgaaggggtgaactctctgctgcagatggctgga
ctcctgggaagactctgtgcaaagacagcctcccctgcagccagctaa

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